RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 PPP1R1BQ9UD71 204 aaPredicted RBP10.82□□□□□ -0.68
NUP98-217ENST00000530345 NHSQ6T4R5 1651 aa10.82□□□□□ -0.68
NUP98-217ENST00000530345 CENPJQ9HC77 1338 aaPredicted RBP10.82□□□□□ -0.68
NUP98-217ENST00000530345 LTN1O94822 1766 aa10.81□□□□□ -0.68
NUP98-217ENST00000530345 KCNQ2O43526 872 aa10.81□□□□□ -0.68
NUP98-217ENST00000530345 YY1P25490 414 aa10.81□□□□□ -0.68
NUP98-217ENST00000530345 FAM208AQ9UK61 1670 aaKnown RBP10.81□□□□□ -0.68
NUP98-217ENST00000530345 SRPK2P78362 688 aaKnown RBP10.8□□□□□ -0.68
NUP98-217ENST00000530345 NUTM2GQ5VZR2 741 aa10.8□□□□□ -0.68
NUP98-217ENST00000530345 CPSF1Q10570 1443 aaKnown RBP10.8□□□□□ -0.68
NUP98-217ENST00000530345 UTRNP46939 3433 aa10.8□□□□□ -0.68
NUP98-217ENST00000530345 MYOM1P52179 1685 aa10.79□□□□□ -0.68
NUP98-217ENST00000530345 DDB1Q16531 1140 aa10.79□□□□□ -0.68
NUP98-217ENST00000530345 BCL11BQ9C0K0 894 aaPredicted RBP10.79□□□□□ -0.68
NUP98-217ENST00000530345 WDR17Q8IZU2 1322 aa10.79□□□□□ -0.68
NUP98-217ENST00000530345 KCNH5Q8NCM2 988 aa10.78□□□□□ -0.68
NUP98-217ENST00000530345 BTAF1O14981 1849 aa10.78□□□□□ -0.68
NUP98-217ENST00000530345 CCDC7Q96M83 1385 aa10.77□□□□□ -0.68
NUP98-217ENST00000530345 COL24A1Q17RW2 1714 aa10.77□□□□□ -0.69
NUP98-217ENST00000530345 NFAT5O94916 1531 aa10.77□□□□□ -0.69
NUP98-217ENST00000530345 EVC2Q86UK5 1308 aa10.77□□□□□ -0.69
NUP98-217ENST00000530345 TTC21AQ8NDW8 1320 aa10.77□□□□□ -0.69
NUP98-217ENST00000530345 TNS2Q63HR2 1409 aa10.76□□□□□ -0.69
NUP98-217ENST00000530345 NLRP6P59044 892 aa10.76□□□□□ -0.69
NUP98-217ENST00000530345 TOM1L2Q6ZVM7 507 aa10.76□□□□□ -0.69
NUP98-217ENST00000530345 ZNF692Q9BU19 519 aaPredicted RBP10.76□□□□□ -0.69
NUP98-217ENST00000530345 PAPPAQ13219 1627 aa10.76□□□□□ -0.69
NUP98-217ENST00000530345 CARD10Q9BWT7 1032 aa10.75□□□□□ -0.69
NUP98-217ENST00000530345 SBNO2Q9Y2G9 1366 aa10.74□□□□□ -0.69
NUP98-217ENST00000530345 ARHGEF25Q86VW2 580 aa10.73□□□□□ -0.69
NUP98-217ENST00000530345 CABP2Q9NPB3 220 aa10.73□□□□□ -0.69
NUP98-217ENST00000530345 MAP3K5Q99683 1374 aa10.73□□□□□ -0.69
NUP98-217ENST00000530345 GOLGB1Q14789 3259 aaKnown RBP10.72□□□□□ -0.69
NUP98-217ENST00000530345 NBPF1Q3BBV0 1214 aa10.72□□□□□ -0.69
NUP98-217ENST00000530345 STK32BQ9NY57 414 aa10.72□□□□□ -0.69
NUP98-217ENST00000530345 CABP1Q9NZU7 370 aa10.72□□□□□ -0.69
NUP98-217ENST00000530345 TUBGCP6Q96RT7 1819 aa10.72□□□□□ -0.69
NUP98-217ENST00000530345 MTFR1LQ9H019 292 aa10.71□□□□□ -0.69
NUP98-217ENST00000530345 ANO8Q9HCE9 1232 aaPredicted RBP10.71□□□□□ -0.69
NUP98-217ENST00000530345 LY75O60449 1722 aa10.7□□□□□ -0.7
NUP98-217ENST00000530345 TTC21BQ7Z4L5 1316 aa10.7□□□□□ -0.7
NUP98-217ENST00000530345 EXOC5O00471 708 aa10.7□□□□□ -0.7
NUP98-217ENST00000530345 MARCH10Q8NA82 808 aaPredicted RBP10.7□□□□□ -0.7
NUP98-217ENST00000530345 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
NUP98-217ENST00000530345 ZBTB7CA1YPR0 619 aa10.69□□□□□ -0.7
NUP98-217ENST00000530345 CSB-PGBD3P0DP91 1061 aa10.69□□□□□ -0.7
NUP98-217ENST00000530345 SLC15A2Q16348 729 aa10.69□□□□□ -0.7
NUP98-217ENST00000530345 TXNRD1Q16881 649 aa10.69□□□□□ -0.7
NUP98-217ENST00000530345 ROCK2O75116 1388 aaKnown RBP10.68□□□□□ -0.7
NUP98-217ENST00000530345 KTN1Q86UP2 1357 aaKnown RBP10.68□□□□□ -0.7
NUP98-217ENST00000530345 PTGER2P43116 358 aa10.68□□□□□ -0.7
NUP98-217ENST00000530345 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
NUP98-217ENST00000530345 DOT1LQ8TEK3 1739 aa10.67□□□□□ -0.7
NUP98-217ENST00000530345 ERBB3P21860 1342 aa10.67□□□□□ -0.7
NUP98-217ENST00000530345 PROM2Q8N271 834 aa10.67□□□□□ -0.7
NUP98-217ENST00000530345 ZBTB7AO95365 584 aa10.66□□□□□ -0.7
NUP98-217ENST00000530345 SHANK3Q9BYB0 1731 aa10.66□□□□□ -0.7
NUP98-217ENST00000530345 CEP350Q5VT06 3117 aa10.66□□□□□ -0.7
NUP98-217ENST00000530345 EDC4Q6P2E9 1401 aaKnown RBP10.66□□□□□ -0.7
NUP98-217ENST00000530345 IL2RBP14784 551 aa10.65□□□□□ -0.7
NUP98-217ENST00000530345 HMGB2P26583 209 aaKnown RBP10.65□□□□□ -0.7
NUP98-217ENST00000530345 SLC16A10Q8TF71 515 aa10.65□□□□□ -0.7
NUP98-217ENST00000530345 SYT17Q9BSW7 474 aa10.65□□□□□ -0.7
NUP98-217ENST00000530345 TAF1LQ8IZX4 1826 aa10.65□□□□□ -0.71
NUP98-217ENST00000530345 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
NUP98-217ENST00000530345 ZNF784Q8NCA9 323 aaPredicted RBP10.64□□□□□ -0.71
NUP98-217ENST00000530345 SGIP1Q9BQI5 828 aa10.64□□□□□ -0.71
NUP98-217ENST00000530345 FHDC1Q9C0D6 1143 aaPredicted RBP10.64□□□□□ -0.71
NUP98-217ENST00000530345 RGPD2P0DJD1 1756 aa10.64□□□□□ -0.71
NUP98-217ENST00000530345 PTF1AQ7RTS3 328 aa10.63□□□□□ -0.71
NUP98-217ENST00000530345 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
NUP98-217ENST00000530345 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
NUP98-217ENST00000530345 ARXQ96QS3 562 aa10.63□□□□□ -0.71
NUP98-217ENST00000530345 CD163L1Q9NR16 1453 aa10.62□□□□□ -0.71
NUP98-217ENST00000530345 HDGFL2Q7Z4V5 671 aaPredicted RBP10.62□□□□□ -0.71
NUP98-217ENST00000530345 PDGFDQ9GZP0 370 aaPredicted RBP10.62□□□□□ -0.71
NUP98-217ENST00000530345 ATF5Q9Y2D1 282 aaPredicted RBP10.62□□□□□ -0.71
NUP98-217ENST00000530345 C5P01031 1676 aa10.62□□□□□ -0.71
NUP98-217ENST00000530345 SLC24A1O60721 1099 aa10.61□□□□□ -0.71
NUP98-217ENST00000530345 NLRP2Q9NX02 1062 aa10.61□□□□□ -0.71
NUP98-217ENST00000530345 TERF2IPQ9NYB0 399 aa10.61□□□□□ -0.71
NUP98-217ENST00000530345 KIF20BQ96Q89 1820 aa10.61□□□□□ -0.71
NUP98-217ENST00000530345 SOX12O15370 315 aa10.6□□□□□ -0.71
NUP98-217ENST00000530345 POLD1P28340 1107 aa10.6□□□□□ -0.71
NUP98-217ENST00000530345 ITGB4P16144 1822 aa10.6□□□□□ -0.71
NUP98-217ENST00000530345 ANKRD24Q8TF21 1146 aa10.59□□□□□ -0.71
NUP98-217ENST00000530345 RTL1A6NKG5 1358 aa10.59□□□□□ -0.71
NUP98-217ENST00000530345 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
NUP98-217ENST00000530345 CGNL1Q0VF96 1302 aa10.58□□□□□ -0.72
NUP98-217ENST00000530345 A0A1W2PP64 1363 aa10.57□□□□□ -0.72
NUP98-217ENST00000530345 C1QTNF8P60827 252 aa10.57□□□□□ -0.72
NUP98-217ENST00000530345 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.57□□□□□ -0.72
NUP98-217ENST00000530345 IP6K1Q92551 441 aa10.57□□□□□ -0.72
NUP98-217ENST00000530345 AKT1S1Q96B36 256 aa10.57□□□□□ -0.72
NUP98-217ENST00000530345 ACSBG1Q96GR2 724 aa10.57□□□□□ -0.72
NUP98-217ENST00000530345 UBR3Q6ZT12 1888 aa10.57□□□□□ -0.72
NUP98-217ENST00000530345 PKD1L3Q7Z443 1732 aa10.56□□□□□ -0.72
NUP98-217ENST00000530345 GPR162Q16538 588 aa10.56□□□□□ -0.72
NUP98-217ENST00000530345 ZNF827Q17R98 1081 aa10.56□□□□□ -0.72
NUP98-217ENST00000530345 NME9Q86XW9 330 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms