RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CHMP7Q8WUX9 453 aaPredicted RBP14.55□□□□□ -0.08
CCDC90B-217ENST00000530253 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
CCDC90B-217ENST00000530253 CEP170Q5SW79 1584 aa14.55□□□□□ -0.08
CCDC90B-217ENST00000530253 HRCP23327 699 aa14.54□□□□□ -0.08
CCDC90B-217ENST00000530253 RIC3Q7Z5B4 369 aa14.54□□□□□ -0.08
CCDC90B-217ENST00000530253 ARHGEF11O15085 1522 aa14.54□□□□□ -0.08
CCDC90B-217ENST00000530253 CFAP99D6REC4 459 aa14.53□□□□□ -0.08
CCDC90B-217ENST00000530253 ADH1CP00326 375 aa14.53□□□□□ -0.08
CCDC90B-217ENST00000530253 PCDHB15Q9Y5E8 787 aa14.52□□□□□ -0.09
CCDC90B-217ENST00000530253 RAPGEF2Q9Y4G8 1499 aa14.51□□□□□ -0.09
CCDC90B-217ENST00000530253 SCARF1Q14162 830 aa14.51□□□□□ -0.09
CCDC90B-217ENST00000530253 F12P00748 615 aaPredicted RBP14.5□□□□□ -0.09
CCDC90B-217ENST00000530253 IRF7Q92985 503 aa14.49□□□□□ -0.09
CCDC90B-217ENST00000530253 KIF21BO75037 1637 aa14.48□□□□□ -0.09
CCDC90B-217ENST00000530253 TUSC1Q2TAM9 212 aa14.48□□□□□ -0.09
CCDC90B-217ENST00000530253 ZFP42Q96MM3 310 aa14.48□□□□□ -0.09
CCDC90B-217ENST00000530253 FAM181BA6NEQ2 426 aa14.47□□□□□ -0.09
CCDC90B-217ENST00000530253 WDR4P57081 412 aaKnown RBP14.47□□□□□ -0.09
CCDC90B-217ENST00000530253 MRPL14Q6P1L8 145 aaKnown RBP14.47□□□□□ -0.09
CCDC90B-217ENST00000530253 BPHLQ86WA6 291 aaPredicted RBP14.47□□□□□ -0.09
CCDC90B-217ENST00000530253 FAM9AQ8IZU1 332 aaPredicted RBP14.47□□□□□ -0.09
CCDC90B-217ENST00000530253 ARMC2Q8NEN0 867 aa14.47□□□□□ -0.09
CCDC90B-217ENST00000530253 CDK15Q96Q40 435 aa14.47□□□□□ -0.09
CCDC90B-217ENST00000530253 MAP10Q9P2G4 905 aa14.47□□□□□ -0.09
CCDC90B-217ENST00000530253 TIMP2P16035 220 aa14.46□□□□□ -0.09
CCDC90B-217ENST00000530253 AGERQ15109 404 aa14.46□□□□□ -0.09
CCDC90B-217ENST00000530253 LCE2CQ5TA81 110 aa14.46□□□□□ -0.09
CCDC90B-217ENST00000530253 CYB5RLQ6IPT4 315 aa14.46□□□□□ -0.09
CCDC90B-217ENST00000530253 NUTM2BA6NNL0 878 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-217ENST00000530253 NUTM2EB1AL46 878 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-217ENST00000530253 NR5A1Q13285 461 aa14.44□□□□□ -0.1
CCDC90B-217ENST00000530253 CSPP1Q1MSJ5 1256 aa14.44□□□□□ -0.1
CCDC90B-217ENST00000530253 NUTM2DQ5VT03 806 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-217ENST00000530253 NUTM2AQ8IVF1 878 aaPredicted RBP14.44□□□□□ -0.1
CCDC90B-217ENST00000530253 CABLES1Q8TDN4 633 aa14.44□□□□□ -0.1
CCDC90B-217ENST00000530253 KIAA0586Q9BVV6 1533 aa14.43□□□□□ -0.1
CCDC90B-217ENST00000530253 ARID5BQ14865 1188 aa14.43□□□□□ -0.1
CCDC90B-217ENST00000530253 HELBQ8NG08 1087 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-217ENST00000530253 TSC1Q92574 1164 aa14.43□□□□□ -0.1
CCDC90B-217ENST00000530253 FOXJ1Q92949 421 aa14.43□□□□□ -0.1
CCDC90B-217ENST00000530253 SHROOM2Q13796 1616 aa14.43□□□□□ -0.1
CCDC90B-217ENST00000530253 H3BM21 787 aa14.42□□□□□ -0.1
CCDC90B-217ENST00000530253 PDE4DQ08499 809 aa14.42□□□□□ -0.1
CCDC90B-217ENST00000530253 MYSM1Q5VVJ2 828 aa14.42□□□□□ -0.1
CCDC90B-217ENST00000530253 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
CCDC90B-217ENST00000530253 NBPF14Q5TI25 921 aa14.41□□□□□ -0.1
CCDC90B-217ENST00000530253 PURBQ96QR8 312 aaKnown RBP14.4□□□□□ -0.1
CCDC90B-217ENST00000530253 KLF16Q9BXK1 252 aaPredicted RBP14.39□□□□□ -0.11
CCDC90B-217ENST00000530253 CTTNBP2Q8WZ74 1663 aa14.39□□□□□ -0.11
CCDC90B-217ENST00000530253 IQGAP2Q13576 1575 aa14.39□□□□□ -0.11
CCDC90B-217ENST00000530253 GOLGA3Q08378 1498 aa14.38□□□□□ -0.11
CCDC90B-217ENST00000530253 LIMD1Q9UGP4 676 aa14.38□□□□□ -0.11
CCDC90B-217ENST00000530253 PER1O15534 1290 aaPredicted RBP14.37□□□□□ -0.11
CCDC90B-217ENST00000530253 LILRB3O75022 631 aa14.37□□□□□ -0.11
CCDC90B-217ENST00000530253 ZIC2O95409 532 aaPredicted RBP14.37□□□□□ -0.11
CCDC90B-217ENST00000530253 GMPRP36959 345 aa14.37□□□□□ -0.11
CCDC90B-217ENST00000530253 RSPH6AQ9H0K4 717 aa14.37□□□□□ -0.11
CCDC90B-217ENST00000530253 UPP2O95045 317 aa14.36□□□□□ -0.11
CCDC90B-217ENST00000530253 ERCC6L2Q5T890 1561 aa14.35□□□□□ -0.11
CCDC90B-217ENST00000530253 QPCTQ16769 361 aa14.35□□□□□ -0.11
CCDC90B-217ENST00000530253 CLK2P49760 499 aaKnown RBP14.34□□□□□ -0.11
CCDC90B-217ENST00000530253 GPKOWQ92917 476 aaPredicted RBP eCLIP14.34□□□□□ -0.11
CCDC90B-217ENST00000530253 UGGT2Q9NYU1 1516 aa14.34□□□□□ -0.11
CCDC90B-217ENST00000530253 VEGFBP49765 207 aa14.33□□□□□ -0.12
CCDC90B-217ENST00000530253 C4orf48Q5BLP8 95 aa14.33□□□□□ -0.12
CCDC90B-217ENST00000530253 ZSCAN1Q8NBB4 408 aa14.33□□□□□ -0.12
CCDC90B-217ENST00000530253 ITPKCQ96DU7 683 aa14.33□□□□□ -0.12
CCDC90B-217ENST00000530253 MAP4K5Q9Y4K4 846 aa14.33□□□□□ -0.12
CCDC90B-217ENST00000530253 C1QTNF2Q9BXJ5 285 aa14.32□□□□□ -0.12
CCDC90B-217ENST00000530253 GRM5P41594 1212 aa14.31□□□□□ -0.12
CCDC90B-217ENST00000530253 SH3RF1Q7Z6J0 888 aa14.31□□□□□ -0.12
CCDC90B-217ENST00000530253 ZFAND3Q9H8U3 227 aa14.31□□□□□ -0.12
CCDC90B-217ENST00000530253 PRG4Q92954 1404 aaPredicted RBP14.31□□□□□ -0.12
CCDC90B-217ENST00000530253 MAN1A2O60476 641 aa14.3□□□□□ -0.12
CCDC90B-217ENST00000530253 NR3C2P08235 984 aa14.3□□□□□ -0.12
CCDC90B-217ENST00000530253 TRMT44Q8IYL2 757 aaKnown RBP14.3□□□□□ -0.12
CCDC90B-217ENST00000530253 DISP1Q96F81 1524 aa14.3□□□□□ -0.12
CCDC90B-217ENST00000530253 FSHRP23945 695 aa14.28□□□□□ -0.12
CCDC90B-217ENST00000530253 VASH1Q7L8A9 365 aaPredicted RBP14.28□□□□□ -0.12
CCDC90B-217ENST00000530253 SLC24A3Q9HC58 644 aa14.28□□□□□ -0.12
CCDC90B-217ENST00000530253 ERBB4Q15303 1308 aa14.27□□□□□ -0.12
CCDC90B-217ENST00000530253 C6orf118Q5T5N4 469 aa14.27□□□□□ -0.13
CCDC90B-217ENST00000530253 SH3BP5LQ7L8J4 393 aa14.27□□□□□ -0.13
CCDC90B-217ENST00000530253 LINC00528Q8N1L1 170 aa14.27□□□□□ -0.13
CCDC90B-217ENST00000530253 MEIOBQ8N635 442 aa14.27□□□□□ -0.13
CCDC90B-217ENST00000530253 EMILIN1Q9Y6C2 1016 aa14.27□□□□□ -0.13
CCDC90B-217ENST00000530253 KIAA0556O60303 1618 aa14.26□□□□□ -0.13
CCDC90B-217ENST00000530253 SAMD9Q5K651 1589 aa14.26□□□□□ -0.13
CCDC90B-217ENST00000530253 VSIG8P0DPA2 414 aa14.26□□□□□ -0.13
CCDC90B-217ENST00000530253 BMP2P12643 396 aa14.26□□□□□ -0.13
CCDC90B-217ENST00000530253 MAGEB6P1A0A0J9YX57 407 aa14.25□□□□□ -0.13
CCDC90B-217ENST00000530253 RTL5Q5HYW3 569 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-217ENST00000530253 CCDC116Q8IYX3 515 aa14.23□□□□□ -0.13
CCDC90B-217ENST00000530253 TSEN34Q9BSV6 310 aaKnown RBP14.23□□□□□ -0.13
CCDC90B-217ENST00000530253 TNIKQ9UKE5 1360 aa14.22□□□□□ -0.13
CCDC90B-217ENST00000530253 SOBPA7XYQ1 873 aa14.22□□□□□ -0.13
CCDC90B-217ENST00000530253 CARMIL2Q6F5E8 1435 aa14.22□□□□□ -0.13
CCDC90B-217ENST00000530253 UBTFP17480 764 aaKnown RBP14.21□□□□□ -0.13
CCDC90B-217ENST00000530253 CDV3Q9UKY7 258 aaKnown RBP14.21□□□□□ -0.13
CCDC90B-217ENST00000530253 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms