RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
SF3B2-208ENST00000529994 PROM2Q8N271 834 aa16.44■□□□□ 0.22
SF3B2-208ENST00000529994 MARCH10Q8NA82 808 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-208ENST00000529994 CABP1Q9NZU7 370 aa16.44■□□□□ 0.22
SF3B2-208ENST00000529994 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
SF3B2-208ENST00000529994 COL18A1P39060 1754 aa16.43■□□□□ 0.22
SF3B2-208ENST00000529994 RGPD5Q99666 1765 aa16.43■□□□□ 0.22
SF3B2-208ENST00000529994 AXIN2Q9Y2T1 843 aa16.43■□□□□ 0.22
SF3B2-208ENST00000529994 CENPJQ9HC77 1338 aaPredicted RBP16.43■□□□□ 0.22
SF3B2-208ENST00000529994 SLIT3O75094 1523 aa16.42■□□□□ 0.22
SF3B2-208ENST00000529994 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
SF3B2-208ENST00000529994 USP6P35125 1406 aa16.42■□□□□ 0.22
SF3B2-208ENST00000529994 UTRNP46939 3433 aa16.41■□□□□ 0.22
SF3B2-208ENST00000529994 PIK3C2AO00443 1686 aa16.41■□□□□ 0.22
SF3B2-208ENST00000529994 SOX12O15370 315 aa16.41■□□□□ 0.22
SF3B2-208ENST00000529994 PTGER2P43116 358 aa16.41■□□□□ 0.22
SF3B2-208ENST00000529994 WDR17Q8IZU2 1322 aa16.4■□□□□ 0.22
SF3B2-208ENST00000529994 BRD4O60885 1362 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-208ENST00000529994 CSB-PGBD3P0DP91 1061 aa16.39■□□□□ 0.21
SF3B2-208ENST00000529994 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
SF3B2-208ENST00000529994 ZNF784Q8NCA9 323 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-208ENST00000529994 STK32BQ9NY57 414 aa16.39■□□□□ 0.21
SF3B2-208ENST00000529994 CPSF1Q10570 1443 aaKnown RBP16.37■□□□□ 0.21
SF3B2-208ENST00000529994 FHDC1Q9C0D6 1143 aaPredicted RBP16.37■□□□□ 0.21
SF3B2-208ENST00000529994 SLC15A2Q16348 729 aa16.36■□□□□ 0.21
SF3B2-208ENST00000529994 SYT17Q9BSW7 474 aa16.36■□□□□ 0.21
SF3B2-208ENST00000529994 CDCA7Q9BWT1 371 aaPredicted RBP16.36■□□□□ 0.21
SF3B2-208ENST00000529994 KAT6BQ8WYB5 2073 aa16.36■□□□□ 0.21
SF3B2-208ENST00000529994 CHD4Q14839 1912 aa16.35■□□□□ 0.21
SF3B2-208ENST00000529994 EXOC5O00471 708 aa16.35■□□□□ 0.21
SF3B2-208ENST00000529994 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
SF3B2-208ENST00000529994 BCL9O00512 1426 aa16.35■□□□□ 0.21
SF3B2-208ENST00000529994 ACSBG1Q96GR2 724 aa16.34■□□□□ 0.21
SF3B2-208ENST00000529994 CARD10Q9BWT7 1032 aa16.34■□□□□ 0.21
SF3B2-208ENST00000529994 MTFR1LQ9H019 292 aa16.33■□□□□ 0.2
SF3B2-208ENST00000529994 TTC21BQ7Z4L5 1316 aa16.33■□□□□ 0.2
SF3B2-208ENST00000529994 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
SF3B2-208ENST00000529994 EVC2Q86UK5 1308 aa16.31■□□□□ 0.2
SF3B2-208ENST00000529994 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
SF3B2-208ENST00000529994 SGIP1Q9BQI5 828 aa16.3■□□□□ 0.2
SF3B2-208ENST00000529994 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
SF3B2-208ENST00000529994 TNS2Q63HR2 1409 aa16.29■□□□□ 0.2
SF3B2-208ENST00000529994 ARXQ96QS3 562 aa16.29■□□□□ 0.2
SF3B2-208ENST00000529994 TRPM1Q7Z4N2 1603 aa16.29■□□□□ 0.2
SF3B2-208ENST00000529994 NFAT5O94916 1531 aa16.29■□□□□ 0.2
SF3B2-208ENST00000529994 CCDC7Q96M83 1385 aa16.28■□□□□ 0.2
SF3B2-208ENST00000529994 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
SF3B2-208ENST00000529994 BTAF1O14981 1849 aa16.28■□□□□ 0.2
SF3B2-208ENST00000529994 NLRP2Q9NX02 1062 aa16.27■□□□□ 0.2
SF3B2-208ENST00000529994 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
SF3B2-208ENST00000529994 TTC21AQ8NDW8 1320 aa16.26■□□□□ 0.19
SF3B2-208ENST00000529994 C1QTNF8P60827 252 aa16.26■□□□□ 0.19
SF3B2-208ENST00000529994 ZNF827Q17R98 1081 aa16.26■□□□□ 0.19
SF3B2-208ENST00000529994 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
SF3B2-208ENST00000529994 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
SF3B2-208ENST00000529994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.25■□□□□ 0.19
SF3B2-208ENST00000529994 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
SF3B2-208ENST00000529994 ABCC6O95255 1503 aa16.24■□□□□ 0.19
SF3B2-208ENST00000529994 LTN1O94822 1766 aa16.24■□□□□ 0.19
SF3B2-208ENST00000529994 GPR162Q16538 588 aa16.24■□□□□ 0.19
SF3B2-208ENST00000529994 IL2RBP14784 551 aa16.23■□□□□ 0.19
SF3B2-208ENST00000529994 PELP1Q8IZL8 1130 aaKnown RBP16.23■□□□□ 0.19
SF3B2-208ENST00000529994 LRRC4BQ9NT99 713 aa16.23■□□□□ 0.19
SF3B2-208ENST00000529994 MON2Q7Z3U7 1717 aa16.22■□□□□ 0.19
SF3B2-208ENST00000529994 ERBB3P21860 1342 aa16.22■□□□□ 0.19
SF3B2-208ENST00000529994 NME9Q86XW9 330 aa16.21■□□□□ 0.19
SF3B2-208ENST00000529994 GOLGB1Q14789 3259 aaKnown RBP16.2■□□□□ 0.18
SF3B2-208ENST00000529994 ANKRD24Q8TF21 1146 aa16.2■□□□□ 0.18
SF3B2-208ENST00000529994 ROCK2O75116 1388 aaKnown RBP16.2■□□□□ 0.18
SF3B2-208ENST00000529994 MAP3K5Q99683 1374 aa16.2■□□□□ 0.18
SF3B2-208ENST00000529994 KCNQ4P56696 695 aa16.19■□□□□ 0.18
SF3B2-208ENST00000529994 TUBGCP6Q96RT7 1819 aa16.18■□□□□ 0.18
SF3B2-208ENST00000529994 DDX54Q8TDD1 881 aaKnown RBP16.18■□□□□ 0.18
SF3B2-208ENST00000529994 AKT1S1Q96B36 256 aa16.18■□□□□ 0.18
SF3B2-208ENST00000529994 SIN3AQ96ST3 1273 aa16.18■□□□□ 0.18
SF3B2-208ENST00000529994 USP31Q70CQ4 1352 aa16.17■□□□□ 0.18
SF3B2-208ENST00000529994 POLD1P28340 1107 aa16.17■□□□□ 0.18
SF3B2-208ENST00000529994 USP54Q70EL1 1684 aa16.17■□□□□ 0.18
SF3B2-208ENST00000529994 GIGYF1O75420 1035 aaPredicted RBP16.16■□□□□ 0.18
SF3B2-208ENST00000529994 NEUROD1Q13562 356 aa16.16■□□□□ 0.18
SF3B2-208ENST00000529994 NLGN2Q8NFZ4 835 aa16.16■□□□□ 0.18
SF3B2-208ENST00000529994 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
SF3B2-208ENST00000529994 SYTL4Q96C24 671 aaPredicted RBP16.16■□□□□ 0.18
SF3B2-208ENST00000529994 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
SF3B2-208ENST00000529994 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
SF3B2-208ENST00000529994 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
SF3B2-208ENST00000529994 LTV1Q96GA3 475 aaPredicted RBP16.15■□□□□ 0.18
SF3B2-208ENST00000529994 TFCP2L1Q9NZI6 479 aa16.15■□□□□ 0.18
SF3B2-208ENST00000529994 CD163L1Q9NR16 1453 aa16.15■□□□□ 0.18
SF3B2-208ENST00000529994 SLC16A10Q8TF71 515 aa16.14■□□□□ 0.17
SF3B2-208ENST00000529994 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
SF3B2-208ENST00000529994 SLC27A3Q5K4L6 730 aa16.13■□□□□ 0.17
SF3B2-208ENST00000529994 SLC12A5Q9H2X9 1139 aa16.13■□□□□ 0.17
SF3B2-208ENST00000529994 DOT1LQ8TEK3 1739 aa16.12■□□□□ 0.17
SF3B2-208ENST00000529994 SHANK3Q9BYB0 1731 aa16.12■□□□□ 0.17
SF3B2-208ENST00000529994 PRIM1P49642 420 aaKnown RBP16.12■□□□□ 0.17
SF3B2-208ENST00000529994 CEP350Q5VT06 3117 aa16.12■□□□□ 0.17
SF3B2-208ENST00000529994 HDGFL2Q7Z4V5 671 aaPredicted RBP16.11■□□□□ 0.17
SF3B2-208ENST00000529994 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
SF3B2-208ENST00000529994 MSH5O43196 834 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms