RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
AMBRA1-207ENST00000529553 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
AMBRA1-207ENST00000529553 ARXQ96QS3 562 aa17.14■□□□□ 0.33
AMBRA1-207ENST00000529553 GIGYF1O75420 1035 aaPredicted RBP17.13■□□□□ 0.33
AMBRA1-207ENST00000529553 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
AMBRA1-207ENST00000529553 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
AMBRA1-207ENST00000529553 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
AMBRA1-207ENST00000529553 MYOM1P52179 1685 aa17.11■□□□□ 0.33
AMBRA1-207ENST00000529553 ITSN1Q15811 1721 aa17.11■□□□□ 0.33
AMBRA1-207ENST00000529553 GPR162Q16538 588 aa17.09■□□□□ 0.33
AMBRA1-207ENST00000529553 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
AMBRA1-207ENST00000529553 EXOC5O00471 708 aa17.08■□□□□ 0.32
AMBRA1-207ENST00000529553 NLRP6P59044 892 aa17.07■□□□□ 0.32
AMBRA1-207ENST00000529553 CHD4Q14839 1912 aa17.07■□□□□ 0.32
AMBRA1-207ENST00000529553 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
AMBRA1-207ENST00000529553 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
AMBRA1-207ENST00000529553 AXIN2Q9Y2T1 843 aa17.05■□□□□ 0.32
AMBRA1-207ENST00000529553 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
AMBRA1-207ENST00000529553 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
AMBRA1-207ENST00000529553 SLC16A10Q8TF71 515 aa17.04■□□□□ 0.32
AMBRA1-207ENST00000529553 CEP350Q5VT06 3117 aa17.01■□□□□ 0.31
AMBRA1-207ENST00000529553 TOPAZ1Q8N9V7 1692 aa17.01■□□□□ 0.31
AMBRA1-207ENST00000529553 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
AMBRA1-207ENST00000529553 ARHGEF25Q86VW2 580 aa17.01■□□□□ 0.31
AMBRA1-207ENST00000529553 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
AMBRA1-207ENST00000529553 PPIP5K1Q6PFW1 1433 aa17.01■□□□□ 0.31
AMBRA1-207ENST00000529553 GRIN3BO60391 1043 aa17■□□□□ 0.31
AMBRA1-207ENST00000529553 POLD1P28340 1107 aa17■□□□□ 0.31
AMBRA1-207ENST00000529553 SLIT3O75094 1523 aa16.99■□□□□ 0.31
AMBRA1-207ENST00000529553 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
AMBRA1-207ENST00000529553 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
AMBRA1-207ENST00000529553 CABP1Q9NZU7 370 aa16.98■□□□□ 0.31
AMBRA1-207ENST00000529553 CCDC7Q96M83 1385 aa16.98■□□□□ 0.31
AMBRA1-207ENST00000529553 USP6P35125 1406 aa16.97■□□□□ 0.31
AMBRA1-207ENST00000529553 AKT1S1Q96B36 256 aa16.96■□□□□ 0.31
AMBRA1-207ENST00000529553 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
AMBRA1-207ENST00000529553 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
AMBRA1-207ENST00000529553 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.3
AMBRA1-207ENST00000529553 COL18A1P39060 1754 aa16.95■□□□□ 0.3
AMBRA1-207ENST00000529553 ZNF827Q17R98 1081 aa16.95■□□□□ 0.3
AMBRA1-207ENST00000529553 SLC27A3Q5K4L6 730 aa16.95■□□□□ 0.3
AMBRA1-207ENST00000529553 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
AMBRA1-207ENST00000529553 ACSBG1Q96GR2 724 aa16.94■□□□□ 0.3
AMBRA1-207ENST00000529553 LRRC4BQ9NT99 713 aa16.94■□□□□ 0.3
AMBRA1-207ENST00000529553 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
AMBRA1-207ENST00000529553 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
AMBRA1-207ENST00000529553 AKAP12Q02952 1782 aa16.92■□□□□ 0.3
AMBRA1-207ENST00000529553 HSPA6P17066 643 aa16.91■□□□□ 0.3
AMBRA1-207ENST00000529553 KLHL34Q8N239 644 aa16.91■□□□□ 0.3
AMBRA1-207ENST00000529553 PAPPAQ13219 1627 aa16.91■□□□□ 0.3
AMBRA1-207ENST00000529553 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
AMBRA1-207ENST00000529553 TTC21BQ7Z4L5 1316 aa16.9■□□□□ 0.3
AMBRA1-207ENST00000529553 GOLGB1Q14789 3259 aaKnown RBP16.89■□□□□ 0.29
AMBRA1-207ENST00000529553 IL2RBP14784 551 aa16.89■□□□□ 0.29
AMBRA1-207ENST00000529553 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
AMBRA1-207ENST00000529553 SHANK3Q9BYB0 1731 aa16.89■□□□□ 0.29
AMBRA1-207ENST00000529553 PNPLA7Q6ZV29 1317 aa16.89■□□□□ 0.29
AMBRA1-207ENST00000529553 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
AMBRA1-207ENST00000529553 WNK3Q9BYP7 1800 aa16.89■□□□□ 0.29
AMBRA1-207ENST00000529553 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
AMBRA1-207ENST00000529553 YBX3P16989 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
AMBRA1-207ENST00000529553 TFCP2L1Q9NZI6 479 aa16.88■□□□□ 0.29
AMBRA1-207ENST00000529553 RAB3GAP2Q9H2M9 1393 aa16.88■□□□□ 0.29
AMBRA1-207ENST00000529553 GPBP1L1Q9HC44 474 aaPredicted RBP16.87■□□□□ 0.29
AMBRA1-207ENST00000529553 TRPM1Q7Z4N2 1603 aa16.87■□□□□ 0.29
AMBRA1-207ENST00000529553 ABCC6O95255 1503 aa16.86■□□□□ 0.29
AMBRA1-207ENST00000529553 NLRP2Q9NX02 1062 aa16.86■□□□□ 0.29
AMBRA1-207ENST00000529553 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
AMBRA1-207ENST00000529553 SOX12O15370 315 aa16.84■□□□□ 0.29
AMBRA1-207ENST00000529553 ERBB3P21860 1342 aa16.84■□□□□ 0.29
AMBRA1-207ENST00000529553 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
AMBRA1-207ENST00000529553 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
AMBRA1-207ENST00000529553 PIK3C2AO00443 1686 aa16.83■□□□□ 0.28
AMBRA1-207ENST00000529553 COL24A1Q17RW2 1714 aa16.83■□□□□ 0.28
AMBRA1-207ENST00000529553 CD2APQ9Y5K6 639 aa16.83■□□□□ 0.28
AMBRA1-207ENST00000529553 HMGB2P26583 209 aaKnown RBP16.81■□□□□ 0.28
AMBRA1-207ENST00000529553 NFAT5O94916 1531 aa16.8■□□□□ 0.28
AMBRA1-207ENST00000529553 QSER1Q2KHR3 1735 aa16.8■□□□□ 0.28
AMBRA1-207ENST00000529553 ADCY9O60503 1353 aa16.78■□□□□ 0.28
AMBRA1-207ENST00000529553 USP31Q70CQ4 1352 aa16.78■□□□□ 0.28
AMBRA1-207ENST00000529553 BTAF1O14981 1849 aa16.78■□□□□ 0.28
AMBRA1-207ENST00000529553 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
AMBRA1-207ENST00000529553 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
AMBRA1-207ENST00000529553 COL23A1Q86Y22 540 aaPredicted RBP16.77■□□□□ 0.28
AMBRA1-207ENST00000529553 QRICH2Q9H0J4 1663 aa16.77■□□□□ 0.28
AMBRA1-207ENST00000529553 RGPD5Q99666 1765 aa16.77■□□□□ 0.27
AMBRA1-207ENST00000529553 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.27
AMBRA1-207ENST00000529553 MSH5O43196 834 aa16.76■□□□□ 0.27
AMBRA1-207ENST00000529553 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
AMBRA1-207ENST00000529553 APLP1P51693 650 aa16.76■□□□□ 0.27
AMBRA1-207ENST00000529553 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
AMBRA1-207ENST00000529553 KCNQ4P56696 695 aa16.75■□□□□ 0.27
AMBRA1-207ENST00000529553 CCNL1Q9UK58 526 aaPredicted RBP16.75■□□□□ 0.27
AMBRA1-207ENST00000529553 ANKRD36BQ8N2N9 1353 aa16.75■□□□□ 0.27
AMBRA1-207ENST00000529553 SYTL4Q96C24 671 aaPredicted RBP16.74■□□□□ 0.27
AMBRA1-207ENST00000529553 KIF3CO14782 793 aa16.73■□□□□ 0.27
AMBRA1-207ENST00000529553 DNAJC5GQ8N7S2 189 aa16.73■□□□□ 0.27
AMBRA1-207ENST00000529553 ZNF526Q8TF50 670 aaPredicted RBP16.73■□□□□ 0.27
AMBRA1-207ENST00000529553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.27
AMBRA1-207ENST00000529553 IP6K1Q92551 441 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms