RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 USP6P35125 1406 aa11.01□□□□□ -0.65
CCDC90B-212ENST00000529312 DEFB132Q7Z7B7 95 aa11□□□□□ -0.65
CCDC90B-212ENST00000529312 CDCA7Q9BWT1 371 aaPredicted RBP11□□□□□ -0.65
CCDC90B-212ENST00000529312 AATKQ6ZMQ8 1374 aa11□□□□□ -0.65
CCDC90B-212ENST00000529312 KTN1Q86UP2 1357 aaKnown RBP11□□□□□ -0.65
CCDC90B-212ENST00000529312 SBNO2Q9Y2G9 1366 aa11□□□□□ -0.65
CCDC90B-212ENST00000529312 TOM1L2Q6ZVM7 507 aa10.99□□□□□ -0.65
CCDC90B-212ENST00000529312 ARHGEF25Q86VW2 580 aa10.99□□□□□ -0.65
CCDC90B-212ENST00000529312 CSB-PGBD3P0DP91 1061 aa10.98□□□□□ -0.65
CCDC90B-212ENST00000529312 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
CCDC90B-212ENST00000529312 LHX8Q68G74 356 aa10.98□□□□□ -0.65
CCDC90B-212ENST00000529312 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.98□□□□□ -0.653e-6■■■■□ 25.7
CCDC90B-212ENST00000529312 SLC12A5Q9H2X9 1139 aa10.98□□□□□ -0.65
CCDC90B-212ENST00000529312 ST20-MTHFSA0A0A6YYL1 179 aa10.97□□□□□ -0.65
CCDC90B-212ENST00000529312 C19orf67A6NJJ6 358 aa10.97□□□□□ -0.65
CCDC90B-212ENST00000529312 CLSPNQ9HAW4 1339 aa10.97□□□□□ -0.65
CCDC90B-212ENST00000529312 SSH2Q76I76 1423 aa10.97□□□□□ -0.65
CCDC90B-212ENST00000529312 PLCH1Q4KWH8 1693 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 TRPM1Q7Z4N2 1603 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 CPSF1Q10570 1443 aaKnown RBP10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 EXOC5O00471 708 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 TRIM37O94972 964 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 APBA3O96018 575 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 TMF1P82094 1093 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 DDB1Q16531 1140 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 FAM182BQ5T319 152 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 CARD10Q9BWT7 1032 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 FOXD4L1Q9NU39 408 aa10.96□□□□□ -0.65
CCDC90B-212ENST00000529312 SOX12O15370 315 aa10.95□□□□□ -0.66
CCDC90B-212ENST00000529312 NBPF14Q5TI25 921 aa10.95□□□□□ -0.66
CCDC90B-212ENST00000529312 PCGF6Q9BYE7 350 aa10.95□□□□□ -0.66
CCDC90B-212ENST00000529312 QRICH2Q9H0J4 1663 aa10.95□□□□□ -0.66
CCDC90B-212ENST00000529312 CRB1P82279 1406 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 WDR17Q8IZU2 1322 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 PRKAR2AP13861 404 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 ABCA3Q99758 1704 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 TOPAZ1Q8N9V7 1692 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 CAMTA1Q9Y6Y1 1673 aa10.94□□□□□ -0.66
CCDC90B-212ENST00000529312 USP31Q70CQ4 1352 aa10.93□□□□□ -0.66
CCDC90B-212ENST00000529312 NINLQ9Y2I6 1382 aa10.93□□□□□ -0.66
CCDC90B-212ENST00000529312 GABBR2O75899 941 aa10.93□□□□□ -0.66
CCDC90B-212ENST00000529312 TESK2Q96S53 571 aa10.93□□□□□ -0.66
CCDC90B-212ENST00000529312 NME9Q86XW9 330 aa10.92□□□□□ -0.66
CCDC90B-212ENST00000529312 COG3Q96JB2 828 aa10.92□□□□□ -0.66
CCDC90B-212ENST00000529312 CAMKK2Q96RR4 588 aa10.92□□□□□ -0.66
CCDC90B-212ENST00000529312 BRWD3Q6RI45 1802 aa10.92□□□□□ -0.66
CCDC90B-212ENST00000529312 PARD3Q8TEW0 1356 aa10.91□□□□□ -0.66
CCDC90B-212ENST00000529312 EZH2Q15910 746 aaKnown RBP10.91□□□□□ -0.66
CCDC90B-212ENST00000529312 NLRP2Q9NX02 1062 aa10.91□□□□□ -0.66
CCDC90B-212ENST00000529312 NRAPQ86VF7 1730 aa10.91□□□□□ -0.66
CCDC90B-212ENST00000529312 CCDC7Q96M83 1385 aa10.9□□□□□ -0.66
CCDC90B-212ENST00000529312 COL5A2P05997 1499 aaPredicted RBP10.9□□□□□ -0.66
CCDC90B-212ENST00000529312 PLSCR1O15162 318 aa10.9□□□□□ -0.66
CCDC90B-212ENST00000529312 BCL11BQ9C0K0 894 aaPredicted RBP10.9□□□□□ -0.66
CCDC90B-212ENST00000529312 EDC4Q6P2E9 1401 aaKnown RBP10.9□□□□□ -0.66
CCDC90B-212ENST00000529312 PHRF1Q9P1Y6 1649 aaKnown RBP10.89□□□□□ -0.67
CCDC90B-212ENST00000529312 IP6K1Q92551 441 aa10.89□□□□□ -0.67
CCDC90B-212ENST00000529312 CRYBG1Q9Y4K1 1723 aa10.89□□□□□ -0.67
CCDC90B-212ENST00000529312 SLIT3O75094 1523 aa10.89□□□□□ -0.67
CCDC90B-212ENST00000529312 DISP2A7MBM2 1401 aa10.88□□□□□ -0.67
CCDC90B-212ENST00000529312 AMPHP49418 695 aa10.88□□□□□ -0.67
CCDC90B-212ENST00000529312 ANKRD24Q8TF21 1146 aa10.88□□□□□ -0.67
CCDC90B-212ENST00000529312 NRKQ7Z2Y5 1582 aa10.87□□□□□ -0.67
CCDC90B-212ENST00000529312 PSDA5PKW4 1024 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-212ENST00000529312 IL2RBP14784 551 aa10.87□□□□□ -0.67
CCDC90B-212ENST00000529312 R3HDM1Q15032 1099 aaKnown RBP10.87□□□□□ -0.67
CCDC90B-212ENST00000529312 MARCH10Q8NA82 808 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-212ENST00000529312 SPDYE1Q8NFV5 336 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-212ENST00000529312 CCER1Q8TC90 406 aaPredicted RBP10.87□□□□□ -0.67
CCDC90B-212ENST00000529312 THSD7AQ9UPZ6 1657 aa10.86□□□□□ -0.67
CCDC90B-212ENST00000529312 A0A1W2PP64 1363 aa10.86□□□□□ -0.67
CCDC90B-212ENST00000529312 USP47Q96K76 1375 aa10.86□□□□□ -0.67
CCDC90B-212ENST00000529312 LMO7Q8WWI1 1683 aa10.85□□□□□ -0.67
CCDC90B-212ENST00000529312 ERBB3P21860 1342 aa10.85□□□□□ -0.67
CCDC90B-212ENST00000529312 OVOS2A0A0G2JMS6 1433 aa10.85□□□□□ -0.67
CCDC90B-212ENST00000529312 OVOS2A0A0J9YW53 1432 aa10.85□□□□□ -0.67
CCDC90B-212ENST00000529312 OVOS2Q6IE36 1432 aa10.85□□□□□ -0.67
CCDC90B-212ENST00000529312 FYB1O15117 783 aa10.85□□□□□ -0.67
CCDC90B-212ENST00000529312 ANKRD36BQ8N2N9 1353 aa10.85□□□□□ -0.67
CCDC90B-212ENST00000529312 HMGB2P26583 209 aaKnown RBP10.84□□□□□ -0.67
CCDC90B-212ENST00000529312 LTV1Q96GA3 475 aaPredicted RBP10.84□□□□□ -0.67
CCDC90B-212ENST00000529312 BCL9O00512 1426 aa10.84□□□□□ -0.67
CCDC90B-212ENST00000529312 AKAP12Q02952 1782 aa10.83□□□□□ -0.68
CCDC90B-212ENST00000529312 CD163L1Q9NR16 1453 aa10.83□□□□□ -0.68
CCDC90B-212ENST00000529312 EIF4G2P78344 907 aaKnown RBP eCLIP10.83□□□□□ -0.68
CCDC90B-212ENST00000529312 RGPD1P0DJD0 1748 aa10.83□□□□□ -0.68
CCDC90B-212ENST00000529312 PIK3C2AO00443 1686 aa10.82□□□□□ -0.68
CCDC90B-212ENST00000529312 HOXC9P31274 260 aa10.82□□□□□ -0.68
CCDC90B-212ENST00000529312 GGNBP2Q9H3C7 697 aa10.82□□□□□ -0.68
CCDC90B-212ENST00000529312 ABCC6O95255 1503 aa10.82□□□□□ -0.68
CCDC90B-212ENST00000529312 MAP3K19Q56UN5 1328 aa10.82□□□□□ -0.68
CCDC90B-212ENST00000529312 COL18A1P39060 1754 aa10.81□□□□□ -0.68
CCDC90B-212ENST00000529312 DDX54Q8TDD1 881 aaKnown RBP10.81□□□□□ -0.68
CCDC90B-212ENST00000529312 SPON1Q9HCB6 807 aa10.81□□□□□ -0.68
CCDC90B-212ENST00000529312 CGNL1Q0VF96 1302 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms