RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 PPM1GO15355 546 aaPredicted RBP15.47■□□□□ 0.07
CAPN1-217ENST00000529133 HOXC9P31274 260 aa15.47■□□□□ 0.07
CAPN1-217ENST00000529133 AMPHP49418 695 aa15.47■□□□□ 0.07
CAPN1-217ENST00000529133 IP6K1Q92551 441 aa15.46■□□□□ 0.07
CAPN1-217ENST00000529133 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.06
CAPN1-217ENST00000529133 CAMTA1Q9Y6Y1 1673 aa15.45■□□□□ 0.06
CAPN1-217ENST00000529133 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
CAPN1-217ENST00000529133 PLCH1Q4KWH8 1693 aa15.44■□□□□ 0.06
CAPN1-217ENST00000529133 SLIT2O94813 1529 aa15.44■□□□□ 0.06
CAPN1-217ENST00000529133 HSP90AB2PQ58FF8 381 aa15.44■□□□□ 0.06
CAPN1-217ENST00000529133 MEX3CQ5U5Q3 659 aaKnown RBP15.44■□□□□ 0.06
CAPN1-217ENST00000529133 C8orf37Q96NL8 207 aa15.44■□□□□ 0.06
CAPN1-217ENST00000529133 AXIN2Q9Y2T1 843 aa15.44■□□□□ 0.06
CAPN1-217ENST00000529133 MAP2P11137 1827 aaKnown RBP15.44■□□□□ 0.06
CAPN1-217ENST00000529133 INSRP06213 1382 aa15.44■□□□□ 0.06
CAPN1-217ENST00000529133 COL5A2P05997 1499 aaPredicted RBP15.43■□□□□ 0.06
CAPN1-217ENST00000529133 MIER1Q8N108 512 aa15.42■□□□□ 0.06
CAPN1-217ENST00000529133 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
CAPN1-217ENST00000529133 NRAPQ86VF7 1730 aa15.42■□□□□ 0.06
CAPN1-217ENST00000529133 NGLY1Q96IV0 654 aa15.41■□□□□ 0.06
CAPN1-217ENST00000529133 BTG4Q9NY30 223 aa15.41■□□□□ 0.06
CAPN1-217ENST00000529133 ERBB3P21860 1342 aa15.41■□□□□ 0.06
CAPN1-217ENST00000529133 NWD2Q9ULI1 1742 aa15.4■□□□□ 0.06
CAPN1-217ENST00000529133 EIF4A2Q14240 407 aaKnown RBP15.4■□□□□ 0.06
CAPN1-217ENST00000529133 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
CAPN1-217ENST00000529133 FNBP4Q8N3X1 1017 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-217ENST00000529133 ANKRD24Q8TF21 1146 aa15.4■□□□□ 0.06
CAPN1-217ENST00000529133 LTV1Q96GA3 475 aaPredicted RBP15.4■□□□□ 0.06
CAPN1-217ENST00000529133 BCL9LQ86UU0 1499 aa15.4■□□□□ 0.06
CAPN1-217ENST00000529133 AFF2P51816 1311 aa15.39■□□□□ 0.05
CAPN1-217ENST00000529133 RGPD5Q99666 1765 aa15.39■□□□□ 0.05
CAPN1-217ENST00000529133 DIAPH1O60610 1272 aaKnown RBP15.38■□□□□ 0.05
CAPN1-217ENST00000529133 IL13P35225 146 aa15.38■□□□□ 0.05
CAPN1-217ENST00000529133 WDR17Q8IZU2 1322 aa15.38■□□□□ 0.05
CAPN1-217ENST00000529133 CCER2I3L3R5 266 aa15.37■□□□□ 0.05
CAPN1-217ENST00000529133 MRS2Q9HD23 443 aa15.37■□□□□ 0.05
CAPN1-217ENST00000529133 STRN4Q9NRL3 753 aa15.37■□□□□ 0.05
CAPN1-217ENST00000529133 FAM208AQ9UK61 1670 aaKnown RBP15.36■□□□□ 0.05
CAPN1-217ENST00000529133 CSB-PGBD3P0DP91 1061 aa15.36■□□□□ 0.05
CAPN1-217ENST00000529133 EVA1CP58658 441 aa15.36■□□□□ 0.05
CAPN1-217ENST00000529133 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
CAPN1-217ENST00000529133 UNC5CLQ8IV45 518 aa15.36■□□□□ 0.05
CAPN1-217ENST00000529133 USP21Q9UK80 565 aa15.36■□□□□ 0.05
CAPN1-217ENST00000529133 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.36■□□□□ 0.05
CAPN1-217ENST00000529133 RGPD1P0DJD0 1748 aa15.35■□□□□ 0.05
CAPN1-217ENST00000529133 CRB1P82279 1406 aa15.34■□□□□ 0.05
CAPN1-217ENST00000529133 NLRP2Q9NX02 1062 aa15.34■□□□□ 0.05
CAPN1-217ENST00000529133 IGSF1Q8N6C5 1336 aa15.34■□□□□ 0.05
CAPN1-217ENST00000529133 NCAPD2Q15021 1401 aa15.34■□□□□ 0.05
CAPN1-217ENST00000529133 NBPF6Q5VWK0 638 aa15.33■□□□□ 0.04
CAPN1-217ENST00000529133 TOM1L2Q6ZVM7 507 aa15.33■□□□□ 0.04
CAPN1-217ENST00000529133 NBPF4Q96M43 638 aa15.33■□□□□ 0.04
CAPN1-217ENST00000529133 EYA1Q99502 592 aa15.33■□□□□ 0.04
CAPN1-217ENST00000529133 NUDCQ9Y266 331 aa15.33■□□□□ 0.04
CAPN1-217ENST00000529133 ATRNO75882 1429 aa15.33■□□□□ 0.04
CAPN1-217ENST00000529133 U2SURPO15042 1029 aaKnown RBP15.32■□□□□ 0.04
CAPN1-217ENST00000529133 VPS72Q15906 364 aa15.32■□□□□ 0.04
CAPN1-217ENST00000529133 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
CAPN1-217ENST00000529133 CARD10Q9BWT7 1032 aa15.32■□□□□ 0.04
CAPN1-217ENST00000529133 SPATA31A5Q5VU36 1347 aa15.31■□□□□ 0.04
CAPN1-217ENST00000529133 SPATA31A7Q8IWB4 1347 aa15.31■□□□□ 0.04
CAPN1-217ENST00000529133 RGPD2P0DJD1 1756 aa15.31■□□□□ 0.04
CAPN1-217ENST00000529133 U2AF1L5P0DN76 240 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-217ENST00000529133 KDRP35968 1356 aa15.3■□□□□ 0.04
CAPN1-217ENST00000529133 U2AF1Q01081 240 aaKnown RBP eCLIP15.3■□□□□ 0.04
CAPN1-217ENST00000529133 SPATA31A1Q5TZJ5 1347 aa15.3■□□□□ 0.04
CAPN1-217ENST00000529133 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
CAPN1-217ENST00000529133 PNISRQ8TF01 805 aaKnown RBP15.3■□□□□ 0.04
CAPN1-217ENST00000529133 TRPC5Q9UL62 973 aaPredicted RBP15.3■□□□□ 0.04
CAPN1-217ENST00000529133 WDR43Q15061 677 aaKnown RBP eCLIP15.29■□□□□ 0.04
CAPN1-217ENST00000529133 ZNF772Q68DY9 489 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-217ENST00000529133 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
CAPN1-217ENST00000529133 CCDC9Q9Y3X0 531 aaKnown RBP15.29■□□□□ 0.04
CAPN1-217ENST00000529133 GLI3P10071 1580 aa15.28■□□□□ 0.04
CAPN1-217ENST00000529133 HMOX1P09601 288 aa15.28■□□□□ 0.04
CAPN1-217ENST00000529133 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-217ENST00000529133 USP35Q9P2H5 1018 aa15.28■□□□□ 0.04
CAPN1-217ENST00000529133 RGS17Q9UGC6 210 aaPredicted RBP15.28■□□□□ 0.04
CAPN1-217ENST00000529133 DISP2A7MBM2 1401 aa15.27■□□□□ 0.04
CAPN1-217ENST00000529133 TCP11L2Q8N4U5 519 aa15.27■□□□□ 0.04
CAPN1-217ENST00000529133 QTRT2Q9H974 415 aaKnown RBP15.27■□□□□ 0.04
CAPN1-217ENST00000529133 MEGF6O75095 1541 aa15.27■□□□□ 0.03
CAPN1-217ENST00000529133 GJD4Q96KN9 370 aaPredicted RBP15.26■□□□□ 0.03
CAPN1-217ENST00000529133 RSPH6AQ9H0K4 717 aa15.26■□□□□ 0.03
CAPN1-217ENST00000529133 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
CAPN1-217ENST00000529133 WNK3Q9BYP7 1800 aa15.25■□□□□ 0.03
CAPN1-217ENST00000529133 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
CAPN1-217ENST00000529133 FCHSD2O94868 740 aa15.24■□□□□ 0.03
CAPN1-217ENST00000529133 PRKAR2BP31323 418 aa15.24■□□□□ 0.03
CAPN1-217ENST00000529133 BARGINQ6ZT62 677 aa15.24■□□□□ 0.03
CAPN1-217ENST00000529133 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
CAPN1-217ENST00000529133 RAPGEF4Q8WZA2 1011 aa15.24■□□□□ 0.03
CAPN1-217ENST00000529133 OVOS2A0A0G2JMS6 1433 aa15.24■□□□□ 0.03
CAPN1-217ENST00000529133 IL2RBP14784 551 aa15.23■□□□□ 0.03
CAPN1-217ENST00000529133 POTEAQ6S8J7 498 aa15.23■□□□□ 0.03
CAPN1-217ENST00000529133 PARP4Q9UKK3 1724 aaKnown RBP15.23■□□□□ 0.03
CAPN1-217ENST00000529133 THSD7AQ9UPZ6 1657 aa15.22■□□□□ 0.03
CAPN1-217ENST00000529133 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-217ENST00000529133 FAM98CQ17RN3 349 aaKnown RBP15.22■□□□□ 0.03
CAPN1-217ENST00000529133 PLEKHF1Q96S99 279 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms