RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 PRDM11Q9NQV5 511 aa8.86□□□□□ -0.99
NUP98-215ENST00000529063 WNK3Q9BYP7 1800 aa8.86□□□□□ -0.99
NUP98-215ENST00000529063 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
NUP98-215ENST00000529063 R3HDM1Q15032 1099 aaKnown RBP8.85□□□□□ -0.99
NUP98-215ENST00000529063 CHRNA2Q15822 529 aa8.85□□□□□ -0.99
NUP98-215ENST00000529063 EZH2Q15910 746 aaKnown RBP8.85□□□□□ -0.99
NUP98-215ENST00000529063 NGDNQ8NEJ9 315 aaKnown RBP8.85□□□□□ -0.99
NUP98-215ENST00000529063 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
NUP98-215ENST00000529063 CAMKK2Q96RR4 588 aa8.85□□□□□ -0.99
NUP98-215ENST00000529063 SBF2Q86WG5 1849 aa8.84□□□□□ -0.99
NUP98-215ENST00000529063 LRRC37A3O60309 1634 aa8.84□□□□□ -0.99
NUP98-215ENST00000529063 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
NUP98-215ENST00000529063 NUDT16Q96DE0 195 aaKnown RBP8.84□□□□□ -0.99
NUP98-215ENST00000529063 RGPD3A6NKT7 1758 aaPredicted RBP8.84□□□□□ -1
NUP98-215ENST00000529063 RGPD4Q7Z3J3 1758 aa8.84□□□□□ -1
NUP98-215ENST00000529063 USP19O94966 1318 aa8.83□□□□□ -1
NUP98-215ENST00000529063 NKX1-1Q15270 411 aaPredicted RBP8.83□□□□□ -1
NUP98-215ENST00000529063 NUTM2GQ5VZR2 741 aa8.83□□□□□ -1
NUP98-215ENST00000529063 STRN4Q9NRL3 753 aa8.83□□□□□ -1
NUP98-215ENST00000529063 PIK3C2AO00443 1686 aa8.83□□□□□ -1
NUP98-215ENST00000529063 QRICH2Q9H0J4 1663 aa8.83□□□□□ -1
NUP98-215ENST00000529063 COL18A1P39060 1754 aa8.83□□□□□ -1
NUP98-215ENST00000529063 CPDO75976 1380 aa8.83□□□□□ -1
NUP98-215ENST00000529063 COL5A2P05997 1499 aaPredicted RBP8.83□□□□□ -1
NUP98-215ENST00000529063 ACEP12821 1306 aa8.82□□□□□ -1
NUP98-215ENST00000529063 SLIT3O75094 1523 aa8.82□□□□□ -1
NUP98-215ENST00000529063 TRIM37O94972 964 aa8.82□□□□□ -1
NUP98-215ENST00000529063 ZC3H6P61129 1189 aaKnown RBP8.82□□□□□ -1
NUP98-215ENST00000529063 POTEDQ86YR6 584 aa8.82□□□□□ -1
NUP98-215ENST00000529063 PARD3Q8TEW0 1356 aa8.82□□□□□ -1
NUP98-215ENST00000529063 CASZ1Q86V15 1759 aa8.81□□□□□ -1
NUP98-215ENST00000529063 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
NUP98-215ENST00000529063 LARP1Q6PKG0 1096 aaKnown RBP8.81□□□□□ -1
NUP98-215ENST00000529063 BARGINQ6ZT62 677 aa8.81□□□□□ -1
NUP98-215ENST00000529063 CDK19Q9BWU1 502 aa8.81□□□□□ -1
NUP98-215ENST00000529063 PLEKHG3A1L390 1219 aa8.8□□□□□ -1
NUP98-215ENST00000529063 STK25O00506 426 aa8.8□□□□□ -1
NUP98-215ENST00000529063 NBPF8Q3BBV2 869 aa8.8□□□□□ -1
NUP98-215ENST00000529063 FAM196AQ6ZSG2 479 aa8.8□□□□□ -1
NUP98-215ENST00000529063 FAM212AQ96EL1 285 aa8.8□□□□□ -1
NUP98-215ENST00000529063 STAC3Q96MF2 364 aa8.8□□□□□ -1
NUP98-215ENST00000529063 USP35Q9P2H5 1018 aa8.8□□□□□ -1
NUP98-215ENST00000529063 RGPD5Q99666 1765 aa8.8□□□□□ -1
NUP98-215ENST00000529063 PPIP5K1Q6PFW1 1433 aa8.8□□□□□ -1
NUP98-215ENST00000529063 AKAP12Q02952 1782 aa8.79□□□□□ -1
NUP98-215ENST00000529063 APBA3O96018 575 aa8.79□□□□□ -1
NUP98-215ENST00000529063 CCDC61Q9Y6R9 512 aa8.79□□□□□ -1
NUP98-215ENST00000529063 NBPF1Q3BBV0 1214 aa8.78□□□□□ -1
NUP98-215ENST00000529063 USP6P35125 1406 aa8.78□□□□□ -1
NUP98-215ENST00000529063 CRB1P82279 1406 aa8.78□□□□□ -1
NUP98-215ENST00000529063 TRPM1Q7Z4N2 1603 aa8.77□□□□□ -1.01
NUP98-215ENST00000529063 TCP11L2Q8N4U5 519 aa8.77□□□□□ -1.01
NUP98-215ENST00000529063 ABTB2Q8N961 1025 aa8.77□□□□□ -1.01
NUP98-215ENST00000529063 SPDYE1Q8NFV5 336 aaPredicted RBP8.77□□□□□ -1.01
NUP98-215ENST00000529063 OVOS2A0A0G2JMS6 1433 aa8.77□□□□□ -1.01
NUP98-215ENST00000529063 OVOS2A0A0J9YW53 1432 aa8.77□□□□□ -1.01
NUP98-215ENST00000529063 OVOS2Q6IE36 1432 aa8.77□□□□□ -1.01
NUP98-215ENST00000529063 MYOM1P52179 1685 aa8.76□□□□□ -1.01
NUP98-215ENST00000529063 GCP02774 474 aa8.76□□□□□ -1.01
NUP98-215ENST00000529063 NFAT5O94916 1531 aa8.75□□□□□ -1.01
NUP98-215ENST00000529063 BRD4O60885 1362 aaPredicted RBP8.75□□□□□ -1.01
NUP98-215ENST00000529063 AATKQ6ZMQ8 1374 aa8.75□□□□□ -1.01
NUP98-215ENST00000529063 MON2Q7Z3U7 1717 aa8.75□□□□□ -1.01
NUP98-215ENST00000529063 EVA1CP58658 441 aa8.75□□□□□ -1.01
NUP98-215ENST00000529063 PDE3BQ13370 1112 aa8.75□□□□□ -1.01
NUP98-215ENST00000529063 PTF1AQ7RTS3 328 aa8.75□□□□□ -1.01
NUP98-215ENST00000529063 ANO8Q9HCE9 1232 aaPredicted RBP8.75□□□□□ -1.01
NUP98-215ENST00000529063 CABP2Q9NPB3 220 aa8.75□□□□□ -1.01
NUP98-215ENST00000529063 THRAP3Q9Y2W1 955 aaKnown RBP8.75□□□□□ -1.01
NUP98-215ENST00000529063 CENPJQ9HC77 1338 aaPredicted RBP8.75□□□□□ -1.01
NUP98-215ENST00000529063 USP54Q70EL1 1684 aa8.75□□□□□ -1.01
NUP98-215ENST00000529063 CPSF1Q10570 1443 aaKnown RBP8.74□□□□□ -1.01
NUP98-215ENST00000529063 NLRP13Q86W25 1043 aa8.74□□□□□ -1.01
NUP98-215ENST00000529063 PAPPAQ13219 1627 aa8.73□□□□□ -1.01
NUP98-215ENST00000529063 BCL9O00512 1426 aa8.73□□□□□ -1.01
NUP98-215ENST00000529063 NHSQ6T4R5 1651 aa8.73□□□□□ -1.01
NUP98-215ENST00000529063 CHRM1P11229 460 aaPredicted RBP8.73□□□□□ -1.01
NUP98-215ENST00000529063 SRPK2P78362 688 aaKnown RBP8.73□□□□□ -1.01
NUP98-215ENST00000529063 CREBZFQ9NS37 354 aa8.73□□□□□ -1.01
NUP98-215ENST00000529063 AXIN2Q9Y2T1 843 aa8.73□□□□□ -1.01
NUP98-215ENST00000529063 STK24Q9Y6E0 443 aa8.73□□□□□ -1.01
NUP98-215ENST00000529063 NINLQ9Y2I6 1382 aa8.73□□□□□ -1.01
NUP98-215ENST00000529063 ABCC6O95255 1503 aa8.72□□□□□ -1.01
NUP98-215ENST00000529063 PRR29P0C7W0 189 aa8.72□□□□□ -1.01
NUP98-215ENST00000529063 BCL11BQ9C0K0 894 aaPredicted RBP8.72□□□□□ -1.01
NUP98-215ENST00000529063 PDGFDQ9GZP0 370 aaPredicted RBP8.72□□□□□ -1.01
NUP98-215ENST00000529063 RYDENQ9NUL5 291 aaKnown RBP8.72□□□□□ -1.01
NUP98-215ENST00000529063 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
NUP98-215ENST00000529063 CLEC11AQ9Y240 323 aa8.72□□□□□ -1.01
NUP98-215ENST00000529063 UTRNP46939 3433 aa8.71□□□□□ -1.01
NUP98-215ENST00000529063 LTN1O94822 1766 aa8.71□□□□□ -1.01
NUP98-215ENST00000529063 ZBTB7CA1YPR0 619 aa8.71□□□□□ -1.02
NUP98-215ENST00000529063 PLSCR1O15162 318 aa8.71□□□□□ -1.02
NUP98-215ENST00000529063 KCNQ2O43526 872 aa8.71□□□□□ -1.02
NUP98-215ENST00000529063 NLRP6P59044 892 aa8.71□□□□□ -1.02
NUP98-215ENST00000529063 NBPF14Q5TI25 921 aa8.71□□□□□ -1.02
NUP98-215ENST00000529063 MARCH10Q8NA82 808 aaPredicted RBP8.71□□□□□ -1.02
NUP98-215ENST00000529063 WDR17Q8IZU2 1322 aa8.71□□□□□ -1.02
NUP98-215ENST00000529063 TNS2Q63HR2 1409 aa8.71□□□□□ -1.02
NUP98-215ENST00000529063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms