RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 CDCA7Q9BWT1 371 aaPredicted RBP22.23■■□□□ 1.15
CTSB-215ENST00000528965 ABCC6O95255 1503 aa22.22■■□□□ 1.15
CTSB-215ENST00000528965 DDB1Q16531 1140 aa22.22■■□□□ 1.15
CTSB-215ENST00000528965 NBPF14Q5TI25 921 aa22.22■■□□□ 1.15
CTSB-215ENST00000528965 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
CTSB-215ENST00000528965 TONSLQ96HA7 1378 aa22.22■■□□□ 1.15
CTSB-215ENST00000528965 COL18A1P39060 1754 aa22.22■■□□□ 1.15
CTSB-215ENST00000528965 ARHGEF25Q86VW2 580 aa22.21■■□□□ 1.15
CTSB-215ENST00000528965 MON2Q7Z3U7 1717 aa22.2■■□□□ 1.14
CTSB-215ENST00000528965 SOX12O15370 315 aa22.2■■□□□ 1.14
CTSB-215ENST00000528965 CSB-PGBD3P0DP91 1061 aa22.2■■□□□ 1.14
CTSB-215ENST00000528965 NUP188Q5SRE5 1749 aa22.2■■□□□ 1.14
CTSB-215ENST00000528965 WNK3Q9BYP7 1800 aa22.2■■□□□ 1.14
CTSB-215ENST00000528965 NFAT5O94916 1531 aa22.19■■□□□ 1.14
CTSB-215ENST00000528965 PEAK1Q9H792 1746 aa22.18■■□□□ 1.14
CTSB-215ENST00000528965 AXIN2Q9Y2T1 843 aa22.17■■□□□ 1.14
CTSB-215ENST00000528965 RGPD3A6NKT7 1758 aaPredicted RBP22.17■■□□□ 1.14
CTSB-215ENST00000528965 RGPD4Q7Z3J3 1758 aa22.17■■□□□ 1.14
CTSB-215ENST00000528965 HDGFL2Q7Z4V5 671 aaPredicted RBP22.16■■□□□ 1.14
CTSB-215ENST00000528965 CARD10Q9BWT7 1032 aa22.16■■□□□ 1.14
CTSB-215ENST00000528965 CCDC7Q96M83 1385 aa22.15■■□□□ 1.14
CTSB-215ENST00000528965 USP31Q70CQ4 1352 aa22.14■■□□□ 1.14
CTSB-215ENST00000528965 USP54Q70EL1 1684 aa22.14■■□□□ 1.14
CTSB-215ENST00000528965 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.13
CTSB-215ENST00000528965 TMC1Q8TDI8 760 aa22.14■■□□□ 1.13
CTSB-215ENST00000528965 BCL9O00512 1426 aa22.14■■□□□ 1.13
CTSB-215ENST00000528965 BCL11BQ9C0K0 894 aaPredicted RBP22.12■■□□□ 1.13
CTSB-215ENST00000528965 TERF2IPQ9NYB0 399 aa22.12■■□□□ 1.13
CTSB-215ENST00000528965 EDC4Q6P2E9 1401 aaKnown RBP22.12■■□□□ 1.13
CTSB-215ENST00000528965 CD163L1Q9NR16 1453 aa22.11■■□□□ 1.13
CTSB-215ENST00000528965 RGPD5Q99666 1765 aa22.1■■□□□ 1.13
CTSB-215ENST00000528965 PLSCR1O15162 318 aa22.1■■□□□ 1.13
CTSB-215ENST00000528965 PUS7Q96PZ0 661 aaKnown RBP22.1■■□□□ 1.13
CTSB-215ENST00000528965 SBF2Q86WG5 1849 aa22.1■■□□□ 1.13
CTSB-215ENST00000528965 TNS2Q63HR2 1409 aa22.09■■□□□ 1.13
CTSB-215ENST00000528965 NME9Q86XW9 330 aa22.09■■□□□ 1.13
CTSB-215ENST00000528965 MARCH10Q8NA82 808 aaPredicted RBP22.09■■□□□ 1.13
CTSB-215ENST00000528965 NINLQ9Y2I6 1382 aa22.09■■□□□ 1.13
CTSB-215ENST00000528965 EXOC5O00471 708 aa22.08■■□□□ 1.13
CTSB-215ENST00000528965 ERBB3P21860 1342 aa22.07■■□□□ 1.12
CTSB-215ENST00000528965 SLC24A1O60721 1099 aa22.07■■□□□ 1.12
CTSB-215ENST00000528965 A0A1W2PP64 1363 aa22.07■■□□□ 1.12
CTSB-215ENST00000528965 SLC12A5Q9H2X9 1139 aa22.06■■□□□ 1.12
CTSB-215ENST00000528965 SPON1Q9HCB6 807 aa22.05■■□□□ 1.12
CTSB-215ENST00000528965 LTN1O94822 1766 aa22.04■■□□□ 1.12
CTSB-215ENST00000528965 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
CTSB-215ENST00000528965 PPP1R1BQ9UD71 204 aaPredicted RBP22.04■■□□□ 1.12
CTSB-215ENST00000528965 KCNQ2O43526 872 aa22.01■■□□□ 1.11
CTSB-215ENST00000528965 IL2RBP14784 551 aa22.01■■□□□ 1.11
CTSB-215ENST00000528965 ANKRD24Q8TF21 1146 aa22■■□□□ 1.11
CTSB-215ENST00000528965 NHSQ6T4R5 1651 aa21.99■■□□□ 1.11
CTSB-215ENST00000528965 PTF1AQ7RTS3 328 aa21.99■■□□□ 1.11
CTSB-215ENST00000528965 ANO8Q9HCE9 1232 aaPredicted RBP21.99■■□□□ 1.11
CTSB-215ENST00000528965 ST20-MTHFSA0A0A6YYL1 179 aa21.97■■□□□ 1.11
CTSB-215ENST00000528965 TESK2Q96S53 571 aa21.97■■□□□ 1.11
CTSB-215ENST00000528965 STK32BQ9NY57 414 aa21.97■■□□□ 1.11
CTSB-215ENST00000528965 FAM208AQ9UK61 1670 aaKnown RBP21.97■■□□□ 1.11
CTSB-215ENST00000528965 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
CTSB-215ENST00000528965 COG3Q96JB2 828 aa21.96■■□□□ 1.11
CTSB-215ENST00000528965 CASZ1Q86V15 1759 aa21.95■■□□□ 1.1
CTSB-215ENST00000528965 DCAF8L1A6NGE4 600 aa21.95■■□□□ 1.1
CTSB-215ENST00000528965 IP6K1Q92551 441 aa21.94■■□□□ 1.1
CTSB-215ENST00000528965 ANKRD36BQ8N2N9 1353 aa21.94■■□□□ 1.1
CTSB-215ENST00000528965 PROM2Q8N271 834 aa21.93■■□□□ 1.1
CTSB-215ENST00000528965 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
CTSB-215ENST00000528965 ACSBG1Q96GR2 724 aa21.92■■□□□ 1.1
CTSB-215ENST00000528965 TMF1P82094 1093 aa21.91■■□□□ 1.1
CTSB-215ENST00000528965 RTL1A6NKG5 1358 aa21.9■■□□□ 1.1
CTSB-215ENST00000528965 USP47Q96K76 1375 aa21.9■■□□□ 1.1
CTSB-215ENST00000528965 AMPHP49418 695 aa21.9■■□□□ 1.1
CTSB-215ENST00000528965 SLC15A2Q16348 729 aa21.9■■□□□ 1.1
CTSB-215ENST00000528965 MAP3K19Q56UN5 1328 aa21.89■■□□□ 1.1
CTSB-215ENST00000528965 LTV1Q96GA3 475 aaPredicted RBP21.89■■□□□ 1.09
CTSB-215ENST00000528965 CDCA8Q53HL2 280 aa21.88■■□□□ 1.09
CTSB-215ENST00000528965 ZBTB7AO95365 584 aa21.87■■□□□ 1.09
CTSB-215ENST00000528965 BTAF1O14981 1849 aa21.86■■□□□ 1.09
CTSB-215ENST00000528965 HOXC9P31274 260 aa21.86■■□□□ 1.09
CTSB-215ENST00000528965 SMG6Q86US8 1419 aaKnown RBP21.86■■□□□ 1.09
CTSB-215ENST00000528965 PAPPAQ13219 1627 aa21.84■■□□□ 1.09
CTSB-215ENST00000528965 DDX54Q8TDD1 881 aaKnown RBP21.84■■□□□ 1.09
CTSB-215ENST00000528965 MTFR1LQ9H019 292 aa21.84■■□□□ 1.09
CTSB-215ENST00000528965 PDGFDQ9GZP0 370 aaPredicted RBP21.83■■□□□ 1.09
CTSB-215ENST00000528965 MYOM1P52179 1685 aa21.82■■□□□ 1.08
CTSB-215ENST00000528965 YY1P25490 414 aa21.82■■□□□ 1.08
CTSB-215ENST00000528965 SLC27A3Q5K4L6 730 aa21.81■■□□□ 1.08
CTSB-215ENST00000528965 ATF5Q9Y2D1 282 aaPredicted RBP21.81■■□□□ 1.08
CTSB-215ENST00000528965 PTGER2P43116 358 aa21.8■■□□□ 1.08
CTSB-215ENST00000528965 CGNL1Q0VF96 1302 aa21.8■■□□□ 1.08
CTSB-215ENST00000528965 FYB1O15117 783 aa21.79■■□□□ 1.08
CTSB-215ENST00000528965 ZCRB1Q8TBF4 217 aaKnown RBP21.79■■□□□ 1.08
CTSB-215ENST00000528965 GGNBP2Q9H3C7 697 aa21.79■■□□□ 1.08
CTSB-215ENST00000528965 KAT6BQ8WYB5 2073 aa21.79■■□□□ 1.08
CTSB-215ENST00000528965 RRS1Q15050 365 aaKnown RBP21.78■■□□□ 1.08
CTSB-215ENST00000528965 SYTL4Q96C24 671 aaPredicted RBP21.78■■□□□ 1.08
CTSB-215ENST00000528965 MEGF6O75095 1541 aa21.78■■□□□ 1.08
CTSB-215ENST00000528965 KIF20BQ96Q89 1820 aa21.78■■□□□ 1.08
CTSB-215ENST00000528965 KIF24Q5T7B8 1368 aa21.77■■□□□ 1.08
CTSB-215ENST00000528965 TIMELESSQ9UNS1 1208 aa21.77■■□□□ 1.08
CTSB-215ENST00000528965 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
CTSB-215ENST00000528965 FBLN1P23142 703 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms