RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 C1QTNF8P60827 252 aa11.3□□□□□ -0.6
SNX7-204ENST00000528824 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
SNX7-204ENST00000528824 PROM2Q8N271 834 aa11.3□□□□□ -0.6
SNX7-204ENST00000528824 OVOS2A0A0G2JMS6 1433 aa11.29□□□□□ -0.6
SNX7-204ENST00000528824 OVOS2A0A0J9YW53 1432 aa11.29□□□□□ -0.6
SNX7-204ENST00000528824 OVOS2Q6IE36 1432 aa11.29□□□□□ -0.6
SNX7-204ENST00000528824 NUP188Q5SRE5 1749 aa11.29□□□□□ -0.6
SNX7-204ENST00000528824 NLRP13Q86W25 1043 aa11.28□□□□□ -0.6
SNX7-204ENST00000528824 ABTB2Q8N961 1025 aa11.28□□□□□ -0.6
SNX7-204ENST00000528824 STK32BQ9NY57 414 aa11.28□□□□□ -0.6
SNX7-204ENST00000528824 DDB1Q16531 1140 aa11.28□□□□□ -0.6
SNX7-204ENST00000528824 LARP1Q6PKG0 1096 aaKnown RBP11.28□□□□□ -0.6
SNX7-204ENST00000528824 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
SNX7-204ENST00000528824 CDCA7Q9BWT1 371 aaPredicted RBP11.28□□□□□ -0.6
SNX7-204ENST00000528824 PRR36Q9H6K5 1346 aa11.27□□□□□ -0.61
SNX7-204ENST00000528824 PRR29P0C7W0 189 aa11.27□□□□□ -0.61
SNX7-204ENST00000528824 CPDO75976 1380 aa11.27□□□□□ -0.61
SNX7-204ENST00000528824 MTFR1LQ9H019 292 aa11.26□□□□□ -0.61
SNX7-204ENST00000528824 CCDC61Q9Y6R9 512 aa11.26□□□□□ -0.61
SNX7-204ENST00000528824 ITSN1Q15811 1721 aa11.25□□□□□ -0.61
SNX7-204ENST00000528824 ZBTB7AO95365 584 aa11.25□□□□□ -0.61
SNX7-204ENST00000528824 NUTM2GQ5VZR2 741 aa11.25□□□□□ -0.61
SNX7-204ENST00000528824 SYT17Q9BSW7 474 aa11.25□□□□□ -0.61
SNX7-204ENST00000528824 RGPD3A6NKT7 1758 aaPredicted RBP11.25□□□□□ -0.61
SNX7-204ENST00000528824 RGPD4Q7Z3J3 1758 aa11.25□□□□□ -0.61
SNX7-204ENST00000528824 GIGYF1O75420 1035 aaPredicted RBP11.24□□□□□ -0.61
SNX7-204ENST00000528824 CRYBG1Q9Y4K1 1723 aa11.24□□□□□ -0.61
SNX7-204ENST00000528824 CRB1P82279 1406 aa11.24□□□□□ -0.61
SNX7-204ENST00000528824 BRD4O60885 1362 aaPredicted RBP11.24□□□□□ -0.61
SNX7-204ENST00000528824 GCP02774 474 aa11.24□□□□□ -0.61
SNX7-204ENST00000528824 TOM1L2Q6ZVM7 507 aa11.24□□□□□ -0.61
SNX7-204ENST00000528824 FHDC1Q9C0D6 1143 aaPredicted RBP11.24□□□□□ -0.61
SNX7-204ENST00000528824 ACEP12821 1306 aa11.23□□□□□ -0.61
SNX7-204ENST00000528824 PHRF1Q9P1Y6 1649 aaKnown RBP11.23□□□□□ -0.61
SNX7-204ENST00000528824 POLR3AO14802 1390 aaPredicted RBP11.22□□□□□ -0.61
SNX7-204ENST00000528824 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
SNX7-204ENST00000528824 PTGER2P43116 358 aa11.22□□□□□ -0.61
SNX7-204ENST00000528824 SLC15A2Q16348 729 aa11.22□□□□□ -0.61
SNX7-204ENST00000528824 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
SNX7-204ENST00000528824 NRKQ7Z2Y5 1582 aa11.22□□□□□ -0.61
SNX7-204ENST00000528824 PARP4Q9UKK3 1724 aaKnown RBP11.22□□□□□ -0.61
SNX7-204ENST00000528824 CAMTA1Q9Y6Y1 1673 aa11.21□□□□□ -0.61
SNX7-204ENST00000528824 GPR162Q16538 588 aa11.21□□□□□ -0.61
SNX7-204ENST00000528824 ARXQ96QS3 562 aa11.21□□□□□ -0.61
SNX7-204ENST00000528824 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
SNX7-204ENST00000528824 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
SNX7-204ENST00000528824 TXNRD1Q16881 649 aa11.2□□□□□ -0.62
SNX7-204ENST00000528824 DCAF11Q8TEB1 546 aa11.2□□□□□ -0.62
SNX7-204ENST00000528824 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
SNX7-204ENST00000528824 KDM2AQ9Y2K7 1162 aa11.2□□□□□ -0.62
SNX7-204ENST00000528824 COL5A2P05997 1499 aaPredicted RBP11.2□□□□□ -0.62
SNX7-204ENST00000528824 USP19O94966 1318 aa11.2□□□□□ -0.62
SNX7-204ENST00000528824 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
SNX7-204ENST00000528824 BCL9O00512 1426 aa11.2□□□□□ -0.62
SNX7-204ENST00000528824 EXOC5O00471 708 aa11.2□□□□□ -0.62
SNX7-204ENST00000528824 CHD4Q14839 1912 aa11.19□□□□□ -0.62
SNX7-204ENST00000528824 POLD1P28340 1107 aa11.19□□□□□ -0.62
SNX7-204ENST00000528824 CHADLQ6NUI6 762 aa11.19□□□□□ -0.62
SNX7-204ENST00000528824 AATKQ6ZMQ8 1374 aa11.18□□□□□ -0.62
SNX7-204ENST00000528824 MAP3K5Q99683 1374 aa11.18□□□□□ -0.62
SNX7-204ENST00000528824 CASZ1Q86V15 1759 aa11.18□□□□□ -0.62
SNX7-204ENST00000528824 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
SNX7-204ENST00000528824 LMO7Q8WWI1 1683 aa11.17□□□□□ -0.62
SNX7-204ENST00000528824 NLRP6P59044 892 aa11.17□□□□□ -0.62
SNX7-204ENST00000528824 SRPK2P78362 688 aaKnown RBP11.17□□□□□ -0.62
SNX7-204ENST00000528824 KCNH5Q8NCM2 988 aa11.17□□□□□ -0.62
SNX7-204ENST00000528824 SLC16A10Q8TF71 515 aa11.16□□□□□ -0.62
SNX7-204ENST00000528824 WDR17Q8IZU2 1322 aa11.16□□□□□ -0.62
SNX7-204ENST00000528824 MYOM1P52179 1685 aa11.16□□□□□ -0.62
SNX7-204ENST00000528824 GRIN3BO60391 1043 aa11.16□□□□□ -0.62
SNX7-204ENST00000528824 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
SNX7-204ENST00000528824 MARCH10Q8NA82 808 aaPredicted RBP11.15□□□□□ -0.62
SNX7-204ENST00000528824 CARD10Q9BWT7 1032 aa11.15□□□□□ -0.62
SNX7-204ENST00000528824 PDGFDQ9GZP0 370 aaPredicted RBP11.15□□□□□ -0.62
SNX7-204ENST00000528824 PEAK1Q9H792 1746 aa11.14□□□□□ -0.63
SNX7-204ENST00000528824 CCDC7Q96M83 1385 aa11.14□□□□□ -0.63
SNX7-204ENST00000528824 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
SNX7-204ENST00000528824 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
SNX7-204ENST00000528824 PPIP5K1Q6PFW1 1433 aa11.13□□□□□ -0.63
SNX7-204ENST00000528824 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
SNX7-204ENST00000528824 SBF2Q86WG5 1849 aa11.13□□□□□ -0.63
SNX7-204ENST00000528824 LRRC37A3O60309 1634 aa11.13□□□□□ -0.63
SNX7-204ENST00000528824 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
SNX7-204ENST00000528824 AKAP12Q02952 1782 aa11.11□□□□□ -0.63
SNX7-204ENST00000528824 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
SNX7-204ENST00000528824 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
SNX7-204ENST00000528824 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
SNX7-204ENST00000528824 TOPAZ1Q8N9V7 1692 aa11.1□□□□□ -0.63
SNX7-204ENST00000528824 POTEMA6NI47 508 aa11.09□□□□□ -0.63
SNX7-204ENST00000528824 PTF1AQ7RTS3 328 aa11.09□□□□□ -0.63
SNX7-204ENST00000528824 USP6P35125 1406 aa11.09□□□□□ -0.63
SNX7-204ENST00000528824 CENPJQ9HC77 1338 aaPredicted RBP11.08□□□□□ -0.63
SNX7-204ENST00000528824 ARHGEF25Q86VW2 580 aa11.08□□□□□ -0.64
SNX7-204ENST00000528824 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
SNX7-204ENST00000528824 CPSF1Q10570 1443 aaKnown RBP11.08□□□□□ -0.64
SNX7-204ENST00000528824 SLIT3O75094 1523 aa11.08□□□□□ -0.64
SNX7-204ENST00000528824 TNS2Q63HR2 1409 aa11.07□□□□□ -0.64
SNX7-204ENST00000528824 GPBP1L1Q9HC44 474 aaPredicted RBP11.07□□□□□ -0.64
SNX7-204ENST00000528824 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
SNX7-204ENST00000528824 TFCP2L1Q9NZI6 479 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms