RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 INSM1Q01101 510 aaPredicted RBP6.31□□□□□ -1.4
BRCA2-203ENST00000528762 CBLBQ13191 982 aa6.31□□□□□ -1.4
BRCA2-203ENST00000528762 SKIV2LQ15477 1246 aaKnown RBP6.31□□□□□ -1.4
BRCA2-203ENST00000528762 SH3D19Q5HYK7 790 aa6.31□□□□□ -1.4
BRCA2-203ENST00000528762 LINC00528Q8N1L1 170 aa6.31□□□□□ -1.4
BRCA2-203ENST00000528762 ARHGAP9Q9BRR9 750 aa6.31□□□□□ -1.4
BRCA2-203ENST00000528762 CCDC116Q8IYX3 515 aa6.3□□□□□ -1.4
BRCA2-203ENST00000528762 MEIOBQ8N635 442 aa6.3□□□□□ -1.4
BRCA2-203ENST00000528762 HMX1Q9NP08 348 aaPredicted RBP6.3□□□□□ -1.4
BRCA2-203ENST00000528762 FKBPLQ9UIM3 349 aa6.3□□□□□ -1.4
BRCA2-203ENST00000528762 FIGNL2A6NMB9 653 aa6.29□□□□□ -1.4
BRCA2-203ENST00000528762 SUPT5HO00267 1087 aaKnown RBP6.29□□□□□ -1.4
BRCA2-203ENST00000528762 PPP1R26Q5T8A7 1209 aaPredicted RBP6.29□□□□□ -1.4
BRCA2-203ENST00000528762 IRF7Q92985 503 aa6.29□□□□□ -1.4
BRCA2-203ENST00000528762 OCSTAMPQ9BR26 566 aa6.29□□□□□ -1.4
BRCA2-203ENST00000528762 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.29□□□□□ -1.4
BRCA2-203ENST00000528762 STK17AQ9UEE5 414 aa6.29□□□□□ -1.4
BRCA2-203ENST00000528762 DNMT3LQ9UJW3 386 aa6.29□□□□□ -1.4
BRCA2-203ENST00000528762 UPP2O95045 317 aa6.28□□□□□ -1.4
BRCA2-203ENST00000528762 ZBTB33Q86T24 672 aa6.28□□□□□ -1.4
BRCA2-203ENST00000528762 HOMEZQ8IX15 550 aa6.28□□□□□ -1.4
BRCA2-203ENST00000528762 TRMT44Q8IYL2 757 aaKnown RBP6.28□□□□□ -1.4
BRCA2-203ENST00000528762 SLC10A4Q96EP9 437 aa6.28□□□□□ -1.4
BRCA2-203ENST00000528762 DDRGK1Q96HY6 314 aa6.28□□□□□ -1.4
BRCA2-203ENST00000528762 AGBL1Q96MI9 1066 aa6.28□□□□□ -1.4
BRCA2-203ENST00000528762 USP17L8P0C7I0 530 aa6.27□□□□□ -1.41
BRCA2-203ENST00000528762 KCTD15Q96SI1 283 aaPredicted RBP6.27□□□□□ -1.41
BRCA2-203ENST00000528762 MAP4K5Q9Y4K4 846 aa6.27□□□□□ -1.41
BRCA2-203ENST00000528762 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
BRCA2-203ENST00000528762 PDXDC2PQ6P474 469 aa6.26□□□□□ -1.41
BRCA2-203ENST00000528762 ADAM32Q8TC27 787 aa6.26□□□□□ -1.41
BRCA2-203ENST00000528762 ZMYND15Q9H091 742 aa6.26□□□□□ -1.41
BRCA2-203ENST00000528762 TMPRSS4Q9NRS4 437 aa6.26□□□□□ -1.41
BRCA2-203ENST00000528762 EMILIN1Q9Y6C2 1016 aa6.26□□□□□ -1.41
BRCA2-203ENST00000528762 SOS2Q07890 1332 aaPredicted RBP6.25□□□□□ -1.41
BRCA2-203ENST00000528762 PPFIA3O75145 1194 aa6.25□□□□□ -1.41
BRCA2-203ENST00000528762 RELBQ01201 579 aa6.25□□□□□ -1.41
BRCA2-203ENST00000528762 INTS6LQ5JSJ4 861 aaKnown RBP6.25□□□□□ -1.41
BRCA2-203ENST00000528762 PPP2R2DQ66LE6 453 aa6.25□□□□□ -1.41
BRCA2-203ENST00000528762 ZSCAN1Q8NBB4 408 aa6.25□□□□□ -1.41
BRCA2-203ENST00000528762 GPKOWQ92917 476 aaPredicted RBP eCLIP6.25□□□□□ -1.41
BRCA2-203ENST00000528762 TTLL8A6PVC2 850 aa6.24□□□□□ -1.41
BRCA2-203ENST00000528762 RFC5P40937 340 aa6.24□□□□□ -1.41
BRCA2-203ENST00000528762 NPAS3Q8IXF0 933 aa6.24□□□□□ -1.41
BRCA2-203ENST00000528762 PTK2Q05397 1052 aa6.23□□□□□ -1.41
BRCA2-203ENST00000528762 TSEN34Q9BSV6 310 aaKnown RBP6.23□□□□□ -1.41
BRCA2-203ENST00000528762 ZNF395Q9H8N7 513 aaPredicted RBP6.23□□□□□ -1.41
BRCA2-203ENST00000528762 PGPEP1Q9NXJ5 209 aa6.23□□□□□ -1.41
BRCA2-203ENST00000528762 CTSOP43234 321 aaPredicted RBP6.22□□□□□ -1.41
BRCA2-203ENST00000528762 INSM2Q96T92 566 aaPredicted RBP6.22□□□□□ -1.41
BRCA2-203ENST00000528762 PTSQ03393 145 aa6.21□□□□□ -1.42
BRCA2-203ENST00000528762 Q6ZVU0 165 aa6.21□□□□□ -1.42
BRCA2-203ENST00000528762 DZIP3Q86Y13 1208 aaKnown RBP6.21□□□□□ -1.42
BRCA2-203ENST00000528762 ZNF784Q8NCA9 323 aaPredicted RBP6.21□□□□□ -1.42
BRCA2-203ENST00000528762 POLMQ9NP87 494 aaPredicted RBP6.21□□□□□ -1.42
BRCA2-203ENST00000528762 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.2□□□□□ -1.42
BRCA2-203ENST00000528762 GPR161Q8N6U8 529 aaKnown RBP6.2□□□□□ -1.42
BRCA2-203ENST00000528762 PCMTD1Q96MG8 357 aaPredicted RBP6.2□□□□□ -1.42
BRCA2-203ENST00000528762 TRIM34Q9BYJ4 488 aa6.2□□□□□ -1.42
BRCA2-203ENST00000528762 GOPCQ9HD26 462 aa6.2□□□□□ -1.42
BRCA2-203ENST00000528762 ZC3H4Q9UPT8 1303 aaKnown RBP6.2□□□□□ -1.42
BRCA2-203ENST00000528762 ERVH48-1M5A8F1 160 aa6.19□□□□□ -1.42
BRCA2-203ENST00000528762 SPINT1O43278 529 aa6.19□□□□□ -1.42
BRCA2-203ENST00000528762 ADD1P35611 737 aaKnown RBP6.19□□□□□ -1.42
BRCA2-203ENST00000528762 CYLDQ9NQC7 956 aa6.19□□□□□ -1.42
BRCA2-203ENST00000528762 VSIG8P0DPA2 414 aa6.18□□□□□ -1.42
BRCA2-203ENST00000528762 KRT76Q01546 638 aa6.18□□□□□ -1.42
BRCA2-203ENST00000528762 DHX9Q08211 1270 aaKnown RBP6.18□□□□□ -1.42
BRCA2-203ENST00000528762 CCDC155Q8N6L0 562 aa6.18□□□□□ -1.42
BRCA2-203ENST00000528762 CNTNAP3BQ96NU0 1288 aa6.18□□□□□ -1.42
BRCA2-203ENST00000528762 CNTNAP3Q9BZ76 1288 aa6.18□□□□□ -1.42
BRCA2-203ENST00000528762 CDC14CA4D256 554 aa6.17□□□□□ -1.42
BRCA2-203ENST00000528762 FLIIQ13045 1269 aa6.17□□□□□ -1.42
BRCA2-203ENST00000528762 NBPF20Q3BBV1 942 aa6.17□□□□□ -1.42
BRCA2-203ENST00000528762 CDV3Q9UKY7 258 aaKnown RBP6.17□□□□□ -1.42
BRCA2-203ENST00000528762 PCDHB9Q9Y5E1 797 aa6.17□□□□□ -1.42
BRCA2-203ENST00000528762 FAM181BA6NEQ2 426 aa6.16□□□□□ -1.42
BRCA2-203ENST00000528762 LILRA1O75019 489 aa6.16□□□□□ -1.42
BRCA2-203ENST00000528762 PNMA1Q8ND90 353 aa6.16□□□□□ -1.42
BRCA2-203ENST00000528762 RNF217Q8TC41 542 aa6.16□□□□□ -1.42
BRCA2-203ENST00000528762 GPSM3Q9Y4H4 160 aa6.16□□□□□ -1.42
BRCA2-203ENST00000528762 GIGYF1O75420 1035 aaPredicted RBP6.15□□□□□ -1.42
BRCA2-203ENST00000528762 ADH1AP07327 375 aa6.15□□□□□ -1.42
BRCA2-203ENST00000528762 FBXO45P0C2W1 286 aa6.15□□□□□ -1.42
BRCA2-203ENST00000528762 RHOQP17081 205 aa6.15□□□□□ -1.42
BRCA2-203ENST00000528762 RNFT1Q5M7Z0 435 aa6.15□□□□□ -1.42
BRCA2-203ENST00000528762 FOXD4L5Q5VV16 416 aaPredicted RBP6.15□□□□□ -1.42
BRCA2-203ENST00000528762 VWA5B2Q8N398 1253 aa6.15□□□□□ -1.42
BRCA2-203ENST00000528762 KDF1Q8NAX2 398 aaPredicted RBP6.15□□□□□ -1.42
BRCA2-203ENST00000528762 GJD4Q96KN9 370 aaPredicted RBP6.15□□□□□ -1.42
BRCA2-203ENST00000528762 COL25A1Q9BXS0 654 aaPredicted RBP6.15□□□□□ -1.42
BRCA2-203ENST00000528762 SLC35F4A4IF30 521 aa6.13□□□□□ -1.43
BRCA2-203ENST00000528762 ZBBXA8MT70 800 aa6.13□□□□□ -1.43
BRCA2-203ENST00000528762 ESPNB1AK53 854 aa6.13□□□□□ -1.43
BRCA2-203ENST00000528762 PTGIRP43119 386 aa6.13□□□□□ -1.43
BRCA2-203ENST00000528762 TMEM259Q4ZIN3 620 aa6.13□□□□□ -1.43
BRCA2-203ENST00000528762 C1orf115Q9H7X2 142 aa6.13□□□□□ -1.43
BRCA2-203ENST00000528762 SENP3-EIF4A1A0A087X0R7 540 aa6.12□□□□□ -1.43
BRCA2-203ENST00000528762 ITGA6P23229 1130 aa6.12□□□□□ -1.43
BRCA2-203ENST00000528762 PRICKLE2Q7Z3G6 844 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms