RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 BARGINQ6ZT62 677 aa19.85■□□□□ 0.77
CAPN1-216ENST00000528739 THRAP3Q9Y2W1 955 aaKnown RBP19.85■□□□□ 0.77
CAPN1-216ENST00000528739 ANKRD36BQ8N2N9 1353 aa19.84■□□□□ 0.77
CAPN1-216ENST00000528739 MON2Q7Z3U7 1717 aa19.84■□□□□ 0.77
CAPN1-216ENST00000528739 COL5A2P05997 1499 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-216ENST00000528739 CRB1P82279 1406 aa19.83■□□□□ 0.76
CAPN1-216ENST00000528739 BRWD3Q6RI45 1802 aa19.81■□□□□ 0.76
CAPN1-216ENST00000528739 WDR17Q8IZU2 1322 aa19.81■□□□□ 0.76
CAPN1-216ENST00000528739 GGNBP2Q9H3C7 697 aa19.81■□□□□ 0.76
CAPN1-216ENST00000528739 BLMP54132 1417 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-216ENST00000528739 LMO7Q8WWI1 1683 aa19.81■□□□□ 0.76
CAPN1-216ENST00000528739 DEFB132Q7Z7B7 95 aa19.8■□□□□ 0.76
CAPN1-216ENST00000528739 AMPHP49418 695 aa19.79■□□□□ 0.76
CAPN1-216ENST00000528739 LTV1Q96GA3 475 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-216ENST00000528739 NLRP2Q9NX02 1062 aa19.79■□□□□ 0.76
CAPN1-216ENST00000528739 BAG6P46379 1132 aa19.78■□□□□ 0.76
CAPN1-216ENST00000528739 FAM196AQ6ZSG2 479 aa19.78■□□□□ 0.76
CAPN1-216ENST00000528739 FYB1O15117 783 aa19.77■□□□□ 0.76
CAPN1-216ENST00000528739 FBLN1P23142 703 aa19.77■□□□□ 0.76
CAPN1-216ENST00000528739 DDB1Q16531 1140 aa19.77■□□□□ 0.76
CAPN1-216ENST00000528739 ANKRD24Q8TF21 1146 aa19.77■□□□□ 0.76
CAPN1-216ENST00000528739 CARD10Q9BWT7 1032 aa19.77■□□□□ 0.76
CAPN1-216ENST00000528739 NFAT5O94916 1531 aa19.76■□□□□ 0.75
CAPN1-216ENST00000528739 TRIM37O94972 964 aa19.76■□□□□ 0.75
CAPN1-216ENST00000528739 OVOS2A0A0J9YW53 1432 aa19.75■□□□□ 0.75
CAPN1-216ENST00000528739 OVOS2Q6IE36 1432 aa19.75■□□□□ 0.75
CAPN1-216ENST00000528739 CDCA7Q9BWT1 371 aaPredicted RBP19.74■□□□□ 0.75
CAPN1-216ENST00000528739 THSD7AQ9UPZ6 1657 aa19.74■□□□□ 0.75
CAPN1-216ENST00000528739 RRS1Q15050 365 aaKnown RBP19.73■□□□□ 0.75
CAPN1-216ENST00000528739 IP6K1Q92551 441 aa19.73■□□□□ 0.75
CAPN1-216ENST00000528739 CARD14Q9BXL6 1004 aa19.73■□□□□ 0.75
CAPN1-216ENST00000528739 EXOC5O00471 708 aa19.72■□□□□ 0.75
CAPN1-216ENST00000528739 EN1Q05925 392 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-216ENST00000528739 NSD3Q9BZ95 1437 aa19.72■□□□□ 0.75
CAPN1-216ENST00000528739 COL18A1P39060 1754 aa19.72■□□□□ 0.75
CAPN1-216ENST00000528739 ERBB3P21860 1342 aa19.72■□□□□ 0.75
CAPN1-216ENST00000528739 MAP3K19Q56UN5 1328 aa19.72■□□□□ 0.75
CAPN1-216ENST00000528739 APBA3O96018 575 aa19.71■□□□□ 0.75
CAPN1-216ENST00000528739 CCDC7Q96M83 1385 aa19.7■□□□□ 0.74
CAPN1-216ENST00000528739 HOXC9P31274 260 aa19.69■□□□□ 0.74
CAPN1-216ENST00000528739 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
CAPN1-216ENST00000528739 RGPD5Q99666 1765 aa19.68■□□□□ 0.74
CAPN1-216ENST00000528739 PPM1GO15355 546 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-216ENST00000528739 PANK3Q9H999 370 aa19.68■□□□□ 0.74
CAPN1-216ENST00000528739 EP400Q96L91 3159 aa19.67■□□□□ 0.74
CAPN1-216ENST00000528739 C11orf95C9JLR9 678 aaPredicted RBP19.67■□□□□ 0.74
CAPN1-216ENST00000528739 IL2RBP14784 551 aa19.67■□□□□ 0.74
CAPN1-216ENST00000528739 USP54Q70EL1 1684 aa19.66■□□□□ 0.74
CAPN1-216ENST00000528739 ABCC6O95255 1503 aa19.66■□□□□ 0.74
CAPN1-216ENST00000528739 LTN1O94822 1766 aa19.65■□□□□ 0.74
CAPN1-216ENST00000528739 TNNT2P45379 298 aaPredicted RBP19.65■□□□□ 0.74
CAPN1-216ENST00000528739 EZH2Q15910 746 aaKnown RBP19.65■□□□□ 0.74
CAPN1-216ENST00000528739 MARCH10Q8NA82 808 aaPredicted RBP19.64■□□□□ 0.73
CAPN1-216ENST00000528739 OVOS2A0A0G2JMS6 1433 aa19.64■□□□□ 0.73
CAPN1-216ENST00000528739 SMG6Q86US8 1419 aaKnown RBP19.61■□□□□ 0.73
CAPN1-216ENST00000528739 HSP90AB2PQ58FF8 381 aa19.61■□□□□ 0.73
CAPN1-216ENST00000528739 DDX54Q8TDD1 881 aaKnown RBP19.61■□□□□ 0.73
CAPN1-216ENST00000528739 EMILIN1Q9Y6C2 1016 aa19.61■□□□□ 0.73
CAPN1-216ENST00000528739 PARP4Q9UKK3 1724 aaKnown RBP19.61■□□□□ 0.73
CAPN1-216ENST00000528739 MYOM1P52179 1685 aa19.61■□□□□ 0.73
CAPN1-216ENST00000528739 RTL1A6NKG5 1358 aa19.6■□□□□ 0.73
CAPN1-216ENST00000528739 RGPD1P0DJD0 1748 aa19.6■□□□□ 0.73
CAPN1-216ENST00000528739 USHBP1Q8N6Y0 703 aa19.6■□□□□ 0.73
CAPN1-216ENST00000528739 KNSTRNQ9Y448 316 aa19.6■□□□□ 0.73
CAPN1-216ENST00000528739 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
CAPN1-216ENST00000528739 PSDA5PKW4 1024 aaPredicted RBP19.59■□□□□ 0.73
CAPN1-216ENST00000528739 ACSBG1Q96GR2 724 aa19.59■□□□□ 0.73
CAPN1-216ENST00000528739 LRRC37A3O60309 1634 aa19.58■□□□□ 0.73
CAPN1-216ENST00000528739 CAMKK2Q96RR4 588 aa19.58■□□□□ 0.72
CAPN1-216ENST00000528739 KIF20BQ96Q89 1820 aa19.58■□□□□ 0.72
CAPN1-216ENST00000528739 FLT4P35916 1363 aa19.57■□□□□ 0.72
CAPN1-216ENST00000528739 KIF7Q2M1P5 1343 aa19.57■□□□□ 0.72
CAPN1-216ENST00000528739 NBPF6Q5VWK0 638 aa19.57■□□□□ 0.72
CAPN1-216ENST00000528739 MORC1Q86VD1 984 aa19.57■□□□□ 0.72
CAPN1-216ENST00000528739 RAPGEF4Q8WZA2 1011 aa19.57■□□□□ 0.72
CAPN1-216ENST00000528739 NBPF4Q96M43 638 aa19.57■□□□□ 0.72
CAPN1-216ENST00000528739 BCL11BQ9C0K0 894 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-216ENST00000528739 TNS2Q63HR2 1409 aa19.56■□□□□ 0.72
CAPN1-216ENST00000528739 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
CAPN1-216ENST00000528739 NBPF14Q5TI25 921 aa19.55■□□□□ 0.72
CAPN1-216ENST00000528739 INSRP06213 1382 aa19.55■□□□□ 0.72
CAPN1-216ENST00000528739 TATP17735 454 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-216ENST00000528739 R3HDM1Q15032 1099 aaKnown RBP19.54■□□□□ 0.72
CAPN1-216ENST00000528739 PTF1AQ7RTS3 328 aa19.54■□□□□ 0.72
CAPN1-216ENST00000528739 ZCRB1Q8TBF4 217 aaKnown RBP19.54■□□□□ 0.72
CAPN1-216ENST00000528739 POLKQ9UBT6 870 aa19.53■□□□□ 0.72
CAPN1-216ENST00000528739 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
CAPN1-216ENST00000528739 KCNQ2O43526 872 aa19.52■□□□□ 0.72
CAPN1-216ENST00000528739 SYTL4Q96C24 671 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-216ENST00000528739 WNK3Q9BYP7 1800 aa19.51■□□□□ 0.71
CAPN1-216ENST00000528739 PARD3Q8TEW0 1356 aa19.51■□□□□ 0.71
CAPN1-216ENST00000528739 TNS1Q9HBL0 1735 aaKnown RBP19.51■□□□□ 0.71
CAPN1-216ENST00000528739 PLSCR1O15162 318 aa19.5■□□□□ 0.71
CAPN1-216ENST00000528739 WASHC2AQ641Q2 1341 aa19.5■□□□□ 0.71
CAPN1-216ENST00000528739 NSD2O96028 1365 aa19.49■□□□□ 0.71
CAPN1-216ENST00000528739 FAM208AQ9UK61 1670 aaKnown RBP19.47■□□□□ 0.71
CAPN1-216ENST00000528739 CC2D1BQ5T0F9 858 aaKnown RBP19.47■□□□□ 0.71
CAPN1-216ENST00000528739 BCL9O00512 1426 aa19.47■□□□□ 0.71
CAPN1-216ENST00000528739 PEAK1Q9H792 1746 aa19.47■□□□□ 0.71
CAPN1-216ENST00000528739 MEGF6O75095 1541 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms