RNA–Protein interactions for RNA: ENST00000528653.1

EIF3F-202, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-202ENST00000528653 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
EIF3F-202ENST00000528653 SLIT2O94813 1529 aa18.54■□□□□ 0.56
EIF3F-202ENST00000528653 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
EIF3F-202ENST00000528653 POLKQ9UBT6 870 aa18.54■□□□□ 0.56
EIF3F-202ENST00000528653 AMPHP49418 695 aa18.53■□□□□ 0.56
EIF3F-202ENST00000528653 NGLY1Q96IV0 654 aa18.53■□□□□ 0.56
EIF3F-202ENST00000528653 FLT4P35916 1363 aa18.53■□□□□ 0.56
EIF3F-202ENST00000528653 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.56
EIF3F-202ENST00000528653 AFF2P51816 1311 aa18.52■□□□□ 0.56
EIF3F-202ENST00000528653 PPM1GO15355 546 aaPredicted RBP18.52■□□□□ 0.56
EIF3F-202ENST00000528653 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.55
EIF3F-202ENST00000528653 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.52■□□□□ 0.55
EIF3F-202ENST00000528653 BLMP54132 1417 aaPredicted RBP18.51■□□□□ 0.55
EIF3F-202ENST00000528653 PPP2R1AP30153 589 aa18.51■□□□□ 0.55
EIF3F-202ENST00000528653 HOXC9P31274 260 aa18.51■□□□□ 0.55
EIF3F-202ENST00000528653 RALBP1Q15311 655 aa18.51■□□□□ 0.55
EIF3F-202ENST00000528653 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
EIF3F-202ENST00000528653 BTG4Q9NY30 223 aa18.51■□□□□ 0.55
EIF3F-202ENST00000528653 COL5A2P05997 1499 aaPredicted RBP18.51■□□□□ 0.55
EIF3F-202ENST00000528653 IP6K1Q92551 441 aa18.5■□□□□ 0.55
EIF3F-202ENST00000528653 AXIN2Q9Y2T1 843 aa18.5■□□□□ 0.55
EIF3F-202ENST00000528653 ANP32CO43423 234 aa18.49■□□□□ 0.55
EIF3F-202ENST00000528653 BCL9LQ86UU0 1499 aa18.48■□□□□ 0.55
EIF3F-202ENST00000528653 MTHFSP49914 203 aa18.48■□□□□ 0.55
EIF3F-202ENST00000528653 FNBP4Q8N3X1 1017 aaPredicted RBP18.48■□□□□ 0.55
EIF3F-202ENST00000528653 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
EIF3F-202ENST00000528653 INSRP06213 1382 aa18.47■□□□□ 0.55
EIF3F-202ENST00000528653 HSP90AB2PQ58FF8 381 aa18.47■□□□□ 0.55
EIF3F-202ENST00000528653 DIEXFQ68CQ4 756 aaKnown RBP18.47■□□□□ 0.55
EIF3F-202ENST00000528653 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
EIF3F-202ENST00000528653 USP21Q9UK80 565 aa18.47■□□□□ 0.55
EIF3F-202ENST00000528653 FAM208AQ9UK61 1670 aaKnown RBP18.47■□□□□ 0.55
EIF3F-202ENST00000528653 COL3A1P02461 1466 aaPredicted RBP18.46■□□□□ 0.55
EIF3F-202ENST00000528653 LTV1Q96GA3 475 aaPredicted RBP18.46■□□□□ 0.55
EIF3F-202ENST00000528653 ERBB3P21860 1342 aa18.46■□□□□ 0.55
EIF3F-202ENST00000528653 UNC5CLQ8IV45 518 aa18.45■□□□□ 0.54
EIF3F-202ENST00000528653 ANKRD24Q8TF21 1146 aa18.45■□□□□ 0.54
EIF3F-202ENST00000528653 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
EIF3F-202ENST00000528653 RGPD2P0DJD1 1756 aa18.44■□□□□ 0.54
EIF3F-202ENST00000528653 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
EIF3F-202ENST00000528653 ATRNO75882 1429 aa18.43■□□□□ 0.54
EIF3F-202ENST00000528653 EVA1CP58658 441 aa18.43■□□□□ 0.54
EIF3F-202ENST00000528653 LARP1Q6PKG0 1096 aaKnown RBP18.43■□□□□ 0.54
EIF3F-202ENST00000528653 CRB1P82279 1406 aa18.41■□□□□ 0.54
EIF3F-202ENST00000528653 EIF4A2Q14240 407 aaKnown RBP18.41■□□□□ 0.54
EIF3F-202ENST00000528653 ZNF772Q68DY9 489 aaPredicted RBP18.41■□□□□ 0.54
EIF3F-202ENST00000528653 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
EIF3F-202ENST00000528653 CCDC9Q9Y3X0 531 aaKnown RBP18.41■□□□□ 0.54
EIF3F-202ENST00000528653 GLI3P10071 1580 aa18.4■□□□□ 0.54
EIF3F-202ENST00000528653 TOM1L2Q6ZVM7 507 aa18.4■□□□□ 0.54
EIF3F-202ENST00000528653 VPS72Q15906 364 aa18.39■□□□□ 0.53
EIF3F-202ENST00000528653 NLRP2Q9NX02 1062 aa18.39■□□□□ 0.53
EIF3F-202ENST00000528653 TRPC5Q9UL62 973 aaPredicted RBP18.39■□□□□ 0.53
EIF3F-202ENST00000528653 RGPD1P0DJD0 1748 aa18.39■□□□□ 0.53
EIF3F-202ENST00000528653 WNK3Q9BYP7 1800 aa18.39■□□□□ 0.53
EIF3F-202ENST00000528653 DIAPH1O60610 1272 aaKnown RBP18.37■□□□□ 0.53
EIF3F-202ENST00000528653 IL13P35225 146 aa18.37■□□□□ 0.53
EIF3F-202ENST00000528653 USP35Q9P2H5 1018 aa18.37■□□□□ 0.53
EIF3F-202ENST00000528653 SPATA31A5Q5VU36 1347 aa18.37■□□□□ 0.53
EIF3F-202ENST00000528653 SPATA31A7Q8IWB4 1347 aa18.37■□□□□ 0.53
EIF3F-202ENST00000528653 SPATA31A1Q5TZJ5 1347 aa18.36■□□□□ 0.53
EIF3F-202ENST00000528653 USHBP1Q8N6Y0 703 aa18.36■□□□□ 0.53
EIF3F-202ENST00000528653 QTRT2Q9H974 415 aaKnown RBP18.36■□□□□ 0.53
EIF3F-202ENST00000528653 NBPF6Q5VWK0 638 aa18.35■□□□□ 0.53
EIF3F-202ENST00000528653 NBPF4Q96M43 638 aa18.35■□□□□ 0.53
EIF3F-202ENST00000528653 EYA1Q99502 592 aa18.35■□□□□ 0.53
EIF3F-202ENST00000528653 CARD10Q9BWT7 1032 aa18.35■□□□□ 0.53
EIF3F-202ENST00000528653 NCAPD2Q15021 1401 aa18.34■□□□□ 0.53
EIF3F-202ENST00000528653 IGSF1Q8N6C5 1336 aa18.34■□□□□ 0.53
EIF3F-202ENST00000528653 RXRBP28702 533 aa18.34■□□□□ 0.53
EIF3F-202ENST00000528653 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.52
EIF3F-202ENST00000528653 CCDC184Q52MB2 194 aa18.33■□□□□ 0.52
EIF3F-202ENST00000528653 TCP11L2Q8N4U5 519 aa18.33■□□□□ 0.52
EIF3F-202ENST00000528653 UPF1Q92900 1129 aaKnown RBP eCLIP18.33■□□□□ 0.52
EIF3F-202ENST00000528653 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
EIF3F-202ENST00000528653 THSD7AQ9UPZ6 1657 aa18.31■□□□□ 0.52
EIF3F-202ENST00000528653 MRS2Q9HD23 443 aa18.31■□□□□ 0.52
EIF3F-202ENST00000528653 NUDCQ9Y266 331 aa18.31■□□□□ 0.52
EIF3F-202ENST00000528653 MEGF6O75095 1541 aa18.31■□□□□ 0.52
EIF3F-202ENST00000528653 PARP4Q9UKK3 1724 aaKnown RBP18.31■□□□□ 0.52
EIF3F-202ENST00000528653 DISP2A7MBM2 1401 aa18.31■□□□□ 0.52
EIF3F-202ENST00000528653 RGS12O14924 1447 aa18.31■□□□□ 0.52
EIF3F-202ENST00000528653 RBM6P78332 1123 aaKnown RBP18.3■□□□□ 0.52
EIF3F-202ENST00000528653 FAM98CQ17RN3 349 aaKnown RBP18.3■□□□□ 0.52
EIF3F-202ENST00000528653 AEBP1Q8IUX7 1158 aa18.3■□□□□ 0.52
EIF3F-202ENST00000528653 MIER1Q8N108 512 aa18.3■□□□□ 0.52
EIF3F-202ENST00000528653 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
EIF3F-202ENST00000528653 HMOX1P09601 288 aa18.28■□□□□ 0.52
EIF3F-202ENST00000528653 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
EIF3F-202ENST00000528653 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
EIF3F-202ENST00000528653 SULT6B1Q6IMI4 303 aa18.28■□□□□ 0.52
EIF3F-202ENST00000528653 THRAP3Q9Y2W1 955 aaKnown RBP18.28■□□□□ 0.52
EIF3F-202ENST00000528653 KDRP35968 1356 aa18.28■□□□□ 0.52
EIF3F-202ENST00000528653 A0A0G2JS52 829 aa18.27■□□□□ 0.52
EIF3F-202ENST00000528653 MYT1Q01538 1121 aa18.27■□□□□ 0.52
EIF3F-202ENST00000528653 BARGINQ6ZT62 677 aa18.27■□□□□ 0.52
EIF3F-202ENST00000528653 IL2RBP14784 551 aa18.26■□□□□ 0.51
EIF3F-202ENST00000528653 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
EIF3F-202ENST00000528653 RAPGEF4Q8WZA2 1011 aa18.26■□□□□ 0.51
EIF3F-202ENST00000528653 OVOS2A0A0G2JMS6 1433 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms