RNA–Protein interactions for RNA: ENST00000528588.5

VPS51-206, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-206ENST00000528588 PIK3C2AO00443 1686 aa28.61■■■□□ 2.17
VPS51-206ENST00000528588 AKAP12Q02952 1782 aa28.6■■■□□ 2.17
VPS51-206ENST00000528588 CASZ1Q86V15 1759 aa28.6■■■□□ 2.17
VPS51-206ENST00000528588 ANO8Q9HCE9 1232 aaPredicted RBP28.59■■■□□ 2.17
VPS51-206ENST00000528588 PTF1AQ7RTS3 328 aa28.58■■■□□ 2.17
VPS51-206ENST00000528588 BCL11BQ9C0K0 894 aaPredicted RBP28.58■■■□□ 2.17
VPS51-206ENST00000528588 RGPD5Q99666 1765 aa28.57■■■□□ 2.16
VPS51-206ENST00000528588 WDR17Q8IZU2 1322 aa28.56■■■□□ 2.16
VPS51-206ENST00000528588 L3MBTL2Q969R5 705 aa28.55■■■□□ 2.16
VPS51-206ENST00000528588 AXIN2Q9Y2T1 843 aa28.55■■■□□ 2.16
VPS51-206ENST00000528588 MARCH10Q8NA82 808 aaPredicted RBP28.54■■■□□ 2.16
VPS51-206ENST00000528588 CPSF1Q10570 1443 aaKnown RBP28.53■■■□□ 2.16
VPS51-206ENST00000528588 CDCA7Q9BWT1 371 aaPredicted RBP28.53■■■□□ 2.16
VPS51-206ENST00000528588 SIN3AQ96ST3 1273 aa28.52■■■□□ 2.16
VPS51-206ENST00000528588 PDGFDQ9GZP0 370 aaPredicted RBP28.52■■■□□ 2.16
VPS51-206ENST00000528588 BCL9O00512 1426 aa28.52■■■□□ 2.16
VPS51-206ENST00000528588 PROM2Q8N271 834 aa28.5■■■□□ 2.15
VPS51-206ENST00000528588 EVC2Q86UK5 1308 aa28.49■■■□□ 2.15
VPS51-206ENST00000528588 MYOM1P52179 1685 aa28.49■■■□□ 2.15
VPS51-206ENST00000528588 ZBTB7AO95365 584 aa28.49■■■□□ 2.15
VPS51-206ENST00000528588 TRPM1Q7Z4N2 1603 aa28.48■■■□□ 2.15
VPS51-206ENST00000528588 CSB-PGBD3P0DP91 1061 aa28.48■■■□□ 2.15
VPS51-206ENST00000528588 ARHGEF25Q86VW2 580 aa28.48■■■□□ 2.15
VPS51-206ENST00000528588 SOX12O15370 315 aa28.47■■■□□ 2.15
VPS51-206ENST00000528588 KCNH5Q8NCM2 988 aa28.47■■■□□ 2.15
VPS51-206ENST00000528588 CARD10Q9BWT7 1032 aa28.47■■■□□ 2.15
VPS51-206ENST00000528588 TTC21BQ7Z4L5 1316 aa28.45■■■□□ 2.15
VPS51-206ENST00000528588 TXNRD1Q16881 649 aa28.44■■■□□ 2.14
VPS51-206ENST00000528588 ZNF692Q9BU19 519 aaPredicted RBP28.44■■■□□ 2.14
VPS51-206ENST00000528588 STK32BQ9NY57 414 aa28.44■■■□□ 2.14
VPS51-206ENST00000528588 EXOC5O00471 708 aa28.43■■■□□ 2.14
VPS51-206ENST00000528588 ATF5Q9Y2D1 282 aaPredicted RBP28.43■■■□□ 2.14
VPS51-206ENST00000528588 PTGER2P43116 358 aa28.42■■■□□ 2.14
VPS51-206ENST00000528588 NEUROD1Q13562 356 aa28.42■■■□□ 2.14
VPS51-206ENST00000528588 NFAT5O94916 1531 aa28.42■■■□□ 2.14
VPS51-206ENST00000528588 TTC21AQ8NDW8 1320 aa28.41■■■□□ 2.14
VPS51-206ENST00000528588 CCDC7Q96M83 1385 aa28.39■■■□□ 2.14
VPS51-206ENST00000528588 SLC15A2Q16348 729 aa28.39■■■□□ 2.14
VPS51-206ENST00000528588 TNS2Q63HR2 1409 aa28.38■■■□□ 2.13
VPS51-206ENST00000528588 NHSQ6T4R5 1651 aa28.38■■■□□ 2.13
VPS51-206ENST00000528588 ABCC6O95255 1503 aa28.38■■■□□ 2.13
VPS51-206ENST00000528588 KTN1Q86UP2 1357 aaKnown RBP28.35■■■□□ 2.13
VPS51-206ENST00000528588 FHDC1Q9C0D6 1143 aaPredicted RBP28.34■■■□□ 2.13
VPS51-206ENST00000528588 MTFR1LQ9H019 292 aa28.34■■■□□ 2.13
VPS51-206ENST00000528588 MON2Q7Z3U7 1717 aa28.34■■■□□ 2.13
VPS51-206ENST00000528588 SYT17Q9BSW7 474 aa28.33■■■□□ 2.13
VPS51-206ENST00000528588 ROCK2O75116 1388 aaKnown RBP28.32■■■□□ 2.12
VPS51-206ENST00000528588 ZNF784Q8NCA9 323 aaPredicted RBP28.31■■■□□ 2.12
VPS51-206ENST00000528588 CHD4Q14839 1912 aa28.31■■■□□ 2.12
VPS51-206ENST00000528588 KAT6BQ8WYB5 2073 aa28.31■■■□□ 2.12
VPS51-206ENST00000528588 ACSBG1Q96GR2 724 aa28.3■■■□□ 2.12
VPS51-206ENST00000528588 BTAF1O14981 1849 aa28.29■■■□□ 2.12
VPS51-206ENST00000528588 LTN1O94822 1766 aa28.29■■■□□ 2.12
VPS51-206ENST00000528588 SGIP1Q9BQI5 828 aa28.29■■■□□ 2.12
VPS51-206ENST00000528588 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
VPS51-206ENST00000528588 NLRP2Q9NX02 1062 aa28.28■■■□□ 2.12
VPS51-206ENST00000528588 USP54Q70EL1 1684 aa28.28■■■□□ 2.12
VPS51-206ENST00000528588 ERBB3P21860 1342 aa28.27■■■□□ 2.12
VPS51-206ENST00000528588 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.27■■■□□ 2.12
VPS51-206ENST00000528588 USP31Q70CQ4 1352 aa28.25■■■□□ 2.11
VPS51-206ENST00000528588 UTRNP46939 3433 aa28.25■■■□□ 2.11
VPS51-206ENST00000528588 IL2RBP14784 551 aa28.24■■■□□ 2.11
VPS51-206ENST00000528588 ARXQ96QS3 562 aa28.24■■■□□ 2.11
VPS51-206ENST00000528588 TRIM26Q12899 539 aaPredicted RBP28.22■■■□□ 2.11
VPS51-206ENST00000528588 NME9Q86XW9 330 aa28.22■■■□□ 2.11
VPS51-206ENST00000528588 ANKRD24Q8TF21 1146 aa28.2■■■□□ 2.1
VPS51-206ENST00000528588 ZNF827Q17R98 1081 aa28.19■■■□□ 2.1
VPS51-206ENST00000528588 CD163L1Q9NR16 1453 aa28.19■■■□□ 2.1
VPS51-206ENST00000528588 MAP3K5Q99683 1374 aa28.18■■■□□ 2.1
VPS51-206ENST00000528588 SBNO2Q9Y2G9 1366 aa28.18■■■□□ 2.1
VPS51-206ENST00000528588 TONSLQ96HA7 1378 aa28.16■■■□□ 2.1
VPS51-206ENST00000528588 LRRC4BQ9NT99 713 aa28.16■■■□□ 2.1
VPS51-206ENST00000528588 TMC1Q8TDI8 760 aa28.15■■■□□ 2.1
VPS51-206ENST00000528588 QSER1Q2KHR3 1735 aa28.15■■■□□ 2.1
VPS51-206ENST00000528588 CARD11Q9BXL7 1154 aa28.14■■■□□ 2.1
VPS51-206ENST00000528588 HDGFL2Q7Z4V5 671 aaPredicted RBP28.13■■■□□ 2.09
VPS51-206ENST00000528588 EDC4Q6P2E9 1401 aaKnown RBP28.11■■■□□ 2.09
VPS51-206ENST00000528588 FAM208AQ9UK61 1670 aaKnown RBP28.11■■■□□ 2.09
VPS51-206ENST00000528588 AKT1S1Q96B36 256 aa28.11■■■□□ 2.09
VPS51-206ENST00000528588 GPR162Q16538 588 aa28.1■■■□□ 2.09
VPS51-206ENST00000528588 SLC12A5Q9H2X9 1139 aa28.1■■■□□ 2.09
VPS51-206ENST00000528588 SENP3-EIF4A1A0A087X0R7 540 aa28.09■■■□□ 2.09
VPS51-206ENST00000528588 SLC27A3Q5K4L6 730 aa28.09■■■□□ 2.09
VPS51-206ENST00000528588 DDX54Q8TDD1 881 aaKnown RBP28.09■■■□□ 2.09
VPS51-206ENST00000528588 COL24A1Q17RW2 1714 aa28.09■■■□□ 2.09
VPS51-206ENST00000528588 TUBGCP6Q96RT7 1819 aa28.08■■■□□ 2.09
VPS51-206ENST00000528588 C1QTNF8P60827 252 aa28.08■■■□□ 2.09
VPS51-206ENST00000528588 KLHL34Q8N239 644 aa28.08■■■□□ 2.09
VPS51-206ENST00000528588 SLC16A10Q8TF71 515 aa28.08■■■□□ 2.09
VPS51-206ENST00000528588 POLD1P28340 1107 aa28.06■■■□□ 2.08
VPS51-206ENST00000528588 LTV1Q96GA3 475 aaPredicted RBP28.06■■■□□ 2.08
VPS51-206ENST00000528588 TERF2IPQ9NYB0 399 aa28.06■■■□□ 2.08
VPS51-206ENST00000528588 A0A1W2PP64 1363 aa28.05■■■□□ 2.08
VPS51-206ENST00000528588 PNPLA7Q6ZV29 1317 aa28.05■■■□□ 2.08
VPS51-206ENST00000528588 DOT1LQ8TEK3 1739 aa28.05■■■□□ 2.08
VPS51-206ENST00000528588 IP6K1Q92551 441 aa28.05■■■□□ 2.08
VPS51-206ENST00000528588 SYTL4Q96C24 671 aaPredicted RBP28.03■■■□□ 2.08
VPS51-206ENST00000528588 TFCP2L1Q9NZI6 479 aa28.03■■■□□ 2.08
VPS51-206ENST00000528588 LY75O60449 1722 aa28.02■■■□□ 2.08
VPS51-206ENST00000528588 KCNQ4P56696 695 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms