RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 WDR17Q8IZU2 1322 aa36.77■■■■□ 3.48
TRIM3-206ENST00000528227 R3HDM1Q15032 1099 aaKnown RBP36.76■■■■□ 3.48
TRIM3-206ENST00000528227 RREB1Q92766 1687 aa36.75■■■■□ 3.47
TRIM3-206ENST00000528227 RGPD5Q99666 1765 aa36.75■■■■□ 3.47
TRIM3-206ENST00000528227 WNK3Q9BYP7 1800 aa36.75■■■■□ 3.47
TRIM3-206ENST00000528227 PEAK1Q9H792 1746 aa36.74■■■■□ 3.47
TRIM3-206ENST00000528227 SOX12O15370 315 aa36.74■■■■□ 3.47
TRIM3-206ENST00000528227 CD163L1Q9NR16 1453 aa36.74■■■■□ 3.47
TRIM3-206ENST00000528227 OVOS2A0A0G2JMS6 1433 aa36.71■■■■□ 3.47
TRIM3-206ENST00000528227 OVOS2A0A0J9YW53 1432 aa36.71■■■■□ 3.47
TRIM3-206ENST00000528227 OVOS2Q6IE36 1432 aa36.71■■■■□ 3.47
TRIM3-206ENST00000528227 C11orf95C9JLR9 678 aaPredicted RBP36.71■■■■□ 3.47
TRIM3-206ENST00000528227 USP54Q70EL1 1684 aa36.7■■■■□ 3.47
TRIM3-206ENST00000528227 NUP188Q5SRE5 1749 aa36.69■■■■□ 3.46
TRIM3-206ENST00000528227 DDB1Q16531 1140 aa36.69■■■■□ 3.46
TRIM3-206ENST00000528227 USP31Q70CQ4 1352 aa36.68■■■■□ 3.46
TRIM3-206ENST00000528227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.68■■■■□ 3.46
TRIM3-206ENST00000528227 ABCC6O95255 1503 aa36.68■■■■□ 3.46
TRIM3-206ENST00000528227 TMC1Q8TDI8 760 aa36.66■■■■□ 3.46
TRIM3-206ENST00000528227 CARD10Q9BWT7 1032 aa36.65■■■■□ 3.46
TRIM3-206ENST00000528227 SBF2Q86WG5 1849 aa36.64■■■■□ 3.46
TRIM3-206ENST00000528227 CDCA7Q9BWT1 371 aaPredicted RBP36.64■■■■□ 3.46
TRIM3-206ENST00000528227 SLC12A5Q9H2X9 1139 aa36.64■■■■□ 3.46
TRIM3-206ENST00000528227 CSB-PGBD3P0DP91 1061 aa36.63■■■■□ 3.45
TRIM3-206ENST00000528227 NME9Q86XW9 330 aa36.63■■■■□ 3.45
TRIM3-206ENST00000528227 HDGFL2Q7Z4V5 671 aaPredicted RBP36.62■■■■□ 3.45
TRIM3-206ENST00000528227 PUS7Q96PZ0 661 aaKnown RBP36.61■■■■□ 3.45
TRIM3-206ENST00000528227 EDC4Q6P2E9 1401 aaKnown RBP36.6■■■■□ 3.45
TRIM3-206ENST00000528227 RGPD3A6NKT7 1758 aaPredicted RBP36.58■■■■□ 3.45
TRIM3-206ENST00000528227 RGPD4Q7Z3J3 1758 aa36.58■■■■□ 3.45
TRIM3-206ENST00000528227 A0A1W2PP64 1363 aa36.57■■■■□ 3.45
TRIM3-206ENST00000528227 MARCH10Q8NA82 808 aaPredicted RBP36.57■■■■□ 3.44
TRIM3-206ENST00000528227 TERF2IPQ9NYB0 399 aa36.57■■■■□ 3.44
TRIM3-206ENST00000528227 CCDC7Q96M83 1385 aa36.56■■■■□ 3.44
TRIM3-206ENST00000528227 LTN1O94822 1766 aa36.56■■■■□ 3.44
TRIM3-206ENST00000528227 BCL9O00512 1426 aa36.56■■■■□ 3.44
TRIM3-206ENST00000528227 NBPF14Q5TI25 921 aa36.55■■■■□ 3.44
TRIM3-206ENST00000528227 TESK2Q96S53 571 aa36.55■■■■□ 3.44
TRIM3-206ENST00000528227 TRIM26Q12899 539 aaPredicted RBP36.54■■■■□ 3.44
TRIM3-206ENST00000528227 BCL11BQ9C0K0 894 aaPredicted RBP36.53■■■■□ 3.44
TRIM3-206ENST00000528227 ST20-MTHFSA0A0A6YYL1 179 aa36.52■■■■□ 3.44
TRIM3-206ENST00000528227 PLSCR1O15162 318 aa36.51■■■■□ 3.44
TRIM3-206ENST00000528227 PTF1AQ7RTS3 328 aa36.51■■■■□ 3.44
TRIM3-206ENST00000528227 ERBB3P21860 1342 aa36.51■■■■□ 3.43
TRIM3-206ENST00000528227 NINLQ9Y2I6 1382 aa36.49■■■■□ 3.43
TRIM3-206ENST00000528227 EXOC5O00471 708 aa36.48■■■■□ 3.43
TRIM3-206ENST00000528227 TNS2Q63HR2 1409 aa36.48■■■■□ 3.43
TRIM3-206ENST00000528227 SLC24A1O60721 1099 aa36.44■■■■□ 3.42
TRIM3-206ENST00000528227 NLRP2Q9NX02 1062 aa36.44■■■■□ 3.42
TRIM3-206ENST00000528227 ANKRD24Q8TF21 1146 aa36.41■■■■□ 3.42
TRIM3-206ENST00000528227 IL2RBP14784 551 aa36.37■■■■□ 3.41
TRIM3-206ENST00000528227 PROM2Q8N271 834 aa36.37■■■■□ 3.41
TRIM3-206ENST00000528227 ANO8Q9HCE9 1232 aaPredicted RBP36.36■■■■□ 3.41
TRIM3-206ENST00000528227 NHSQ6T4R5 1651 aa36.35■■■■□ 3.41
TRIM3-206ENST00000528227 IP6K1Q92551 441 aa36.34■■■■□ 3.41
TRIM3-206ENST00000528227 ANKRD36BQ8N2N9 1353 aa36.33■■■■□ 3.41
TRIM3-206ENST00000528227 USP47Q96K76 1375 aa36.33■■■■□ 3.41
TRIM3-206ENST00000528227 COG3Q96JB2 828 aa36.32■■■■□ 3.4
TRIM3-206ENST00000528227 FAM208AQ9UK61 1670 aaKnown RBP36.32■■■■□ 3.4
TRIM3-206ENST00000528227 KCNQ2O43526 872 aa36.31■■■■□ 3.4
TRIM3-206ENST00000528227 SPON1Q9HCB6 807 aa36.31■■■■□ 3.4
TRIM3-206ENST00000528227 CASZ1Q86V15 1759 aa36.3■■■■□ 3.4
TRIM3-206ENST00000528227 TMF1P82094 1093 aa36.29■■■■□ 3.4
TRIM3-206ENST00000528227 TXNRD1Q16881 649 aa36.28■■■■□ 3.4
TRIM3-206ENST00000528227 MAP3K19Q56UN5 1328 aa36.27■■■■□ 3.4
TRIM3-206ENST00000528227 ACSBG1Q96GR2 724 aa36.26■■■■□ 3.4
TRIM3-206ENST00000528227 LTV1Q96GA3 475 aaPredicted RBP36.25■■■■□ 3.39
TRIM3-206ENST00000528227 FBLN1P23142 703 aa36.23■■■■□ 3.39
TRIM3-206ENST00000528227 HOXC9P31274 260 aa36.23■■■■□ 3.39
TRIM3-206ENST00000528227 BTAF1O14981 1849 aa36.2■■■■□ 3.39
TRIM3-206ENST00000528227 AMPHP49418 695 aa36.2■■■■□ 3.39
TRIM3-206ENST00000528227 PPP1R1BQ9UD71 204 aaPredicted RBP36.2■■■■□ 3.39
TRIM3-206ENST00000528227 PDGFDQ9GZP0 370 aaPredicted RBP36.19■■■■□ 3.38
TRIM3-206ENST00000528227 STK32BQ9NY57 414 aa36.19■■■■□ 3.38
TRIM3-206ENST00000528227 FYB1O15117 783 aa36.18■■■■□ 3.38
TRIM3-206ENST00000528227 RGPD2P0DJD1 1756 aa36.17■■■■□ 3.38
TRIM3-206ENST00000528227 RTL1A6NKG5 1358 aa36.16■■■■□ 3.38
TRIM3-206ENST00000528227 SLC15A2Q16348 729 aa36.16■■■■□ 3.38
TRIM3-206ENST00000528227 GGNBP2Q9H3C7 697 aa36.16■■■■□ 3.38
TRIM3-206ENST00000528227 CDCA8Q53HL2 280 aa36.15■■■■□ 3.38
TRIM3-206ENST00000528227 PAPPAQ13219 1627 aa36.13■■■■□ 3.37
TRIM3-206ENST00000528227 RRS1Q15050 365 aaKnown RBP36.13■■■■□ 3.37
TRIM3-206ENST00000528227 DDX54Q8TDD1 881 aaKnown RBP36.13■■■■□ 3.37
TRIM3-206ENST00000528227 KIF20BQ96Q89 1820 aa36.13■■■■□ 3.37
TRIM3-206ENST00000528227 TIMELESSQ9UNS1 1208 aa36.12■■■■□ 3.37
TRIM3-206ENST00000528227 ZBTB7AO95365 584 aa36.11■■■■□ 3.37
TRIM3-206ENST00000528227 MYOM1P52179 1685 aa36.1■■■■□ 3.37
TRIM3-206ENST00000528227 SHANK3Q9BYB0 1731 aa36.09■■■■□ 3.37
TRIM3-206ENST00000528227 MEGF6O75095 1541 aa36.08■■■■□ 3.37
TRIM3-206ENST00000528227 KAT6BQ8WYB5 2073 aa36.07■■■■□ 3.37
TRIM3-206ENST00000528227 CLSPNQ9HAW4 1339 aa36.06■■■■□ 3.36
TRIM3-206ENST00000528227 PTGER2P43116 358 aa36.05■■■■□ 3.36
TRIM3-206ENST00000528227 NBPF6Q5VWK0 638 aa36.04■■■■□ 3.36
TRIM3-206ENST00000528227 NBPF4Q96M43 638 aa36.04■■■■□ 3.36
TRIM3-206ENST00000528227 DOT1LQ8TEK3 1739 aa36.03■■■■□ 3.36
TRIM3-206ENST00000528227 ZCRB1Q8TBF4 217 aaKnown RBP36.03■■■■□ 3.36
TRIM3-206ENST00000528227 LRRC4BQ9NT99 713 aa36.03■■■■□ 3.36
TRIM3-206ENST00000528227 ATF5Q9Y2D1 282 aaPredicted RBP36.03■■■■□ 3.36
TRIM3-206ENST00000528227 SMG6Q86US8 1419 aaKnown RBP36.02■■■■□ 3.36
TRIM3-206ENST00000528227 CARD14Q9BXL6 1004 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms