RNA–Protein interactions for RNA: ENST00000528036.5

PKP3-206, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-206ENST00000528036 TMF1P82094 1093 aa32.47■■■□□ 2.79
PKP3-206ENST00000528036 CDCA8Q53HL2 280 aa32.47■■■□□ 2.79
PKP3-206ENST00000528036 MON2Q7Z3U7 1717 aa32.47■■■□□ 2.79
PKP3-206ENST00000528036 ABCC6O95255 1503 aa32.46■■■□□ 2.79
PKP3-206ENST00000528036 PCGF6Q9BYE7 350 aa32.45■■■□□ 2.79
PKP3-206ENST00000528036 USP47Q96K76 1375 aa32.45■■■□□ 2.78
PKP3-206ENST00000528036 DISP2A7MBM2 1401 aa32.43■■■□□ 2.78
PKP3-206ENST00000528036 FAM182BQ5T319 152 aa32.43■■■□□ 2.78
PKP3-206ENST00000528036 AXIN2Q9Y2T1 843 aa32.43■■■□□ 2.78
PKP3-206ENST00000528036 A0A1W2PP64 1363 aa32.43■■■□□ 2.78
PKP3-206ENST00000528036 SOX12O15370 315 aa32.42■■■□□ 2.78
PKP3-206ENST00000528036 NME9Q86XW9 330 aa32.42■■■□□ 2.78
PKP3-206ENST00000528036 CSB-PGBD3P0DP91 1061 aa32.41■■■□□ 2.78
PKP3-206ENST00000528036 CARD10Q9BWT7 1032 aa32.41■■■□□ 2.78
PKP3-206ENST00000528036 NFAT5O94916 1531 aa32.41■■■□□ 2.78
PKP3-206ENST00000528036 RGPD1P0DJD0 1748 aa32.4■■■□□ 2.78
PKP3-206ENST00000528036 COL18A1P39060 1754 aa32.39■■■□□ 2.78
PKP3-206ENST00000528036 USP54Q70EL1 1684 aa32.37■■■□□ 2.77
PKP3-206ENST00000528036 DDB1Q16531 1140 aa32.37■■■□□ 2.77
PKP3-206ENST00000528036 PARD3Q8TEW0 1356 aa32.36■■■□□ 2.77
PKP3-206ENST00000528036 TRIM37O94972 964 aa32.36■■■□□ 2.77
PKP3-206ENST00000528036 ANKRD36BQ8N2N9 1353 aa32.35■■■□□ 2.77
PKP3-206ENST00000528036 CCDC7Q96M83 1385 aa32.35■■■□□ 2.77
PKP3-206ENST00000528036 EN1Q05925 392 aaPredicted RBP32.35■■■□□ 2.77
PKP3-206ENST00000528036 PARP4Q9UKK3 1724 aaKnown RBP32.34■■■□□ 2.77
PKP3-206ENST00000528036 COG3Q96JB2 828 aa32.32■■■□□ 2.76
PKP3-206ENST00000528036 APBA3O96018 575 aa32.31■■■□□ 2.76
PKP3-206ENST00000528036 OVOS2A0A0G2JMS6 1433 aa32.31■■■□□ 2.76
PKP3-206ENST00000528036 OVOS2A0A0J9YW53 1432 aa32.31■■■□□ 2.76
PKP3-206ENST00000528036 OVOS2Q6IE36 1432 aa32.31■■■□□ 2.76
PKP3-206ENST00000528036 ERBB3P21860 1342 aa32.28■■■□□ 2.76
PKP3-206ENST00000528036 CAMKK2Q96RR4 588 aa32.28■■■□□ 2.76
PKP3-206ENST00000528036 EXOC5O00471 708 aa32.26■■■□□ 2.75
PKP3-206ENST00000528036 CCER1Q8TC90 406 aaPredicted RBP32.25■■■□□ 2.75
PKP3-206ENST00000528036 BCL9O00512 1426 aa32.25■■■□□ 2.75
PKP3-206ENST00000528036 IP6K1Q92551 441 aa32.24■■■□□ 2.75
PKP3-206ENST00000528036 TNS1Q9HBL0 1735 aaKnown RBP32.23■■■□□ 2.75
PKP3-206ENST00000528036 EZH2Q15910 746 aaKnown RBP32.23■■■□□ 2.75
PKP3-206ENST00000528036 NLRP2Q9NX02 1062 aa32.23■■■□□ 2.75
PKP3-206ENST00000528036 ANKRD24Q8TF21 1146 aa32.22■■■□□ 2.75
PKP3-206ENST00000528036 LRRC37A3O60309 1634 aa32.18■■■□□ 2.74
PKP3-206ENST00000528036 BCL11BQ9C0K0 894 aaPredicted RBP32.18■■■□□ 2.74
PKP3-206ENST00000528036 IL2RBP14784 551 aa32.17■■■□□ 2.74
PKP3-206ENST00000528036 NBPF14Q5TI25 921 aa32.17■■■□□ 2.74
PKP3-206ENST00000528036 MARCH10Q8NA82 808 aaPredicted RBP32.17■■■□□ 2.74
PKP3-206ENST00000528036 RGPD5Q99666 1765 aa32.17■■■□□ 2.74
PKP3-206ENST00000528036 FYB1O15117 783 aa32.16■■■□□ 2.74
PKP3-206ENST00000528036 PLSCR1O15162 318 aa32.16■■■□□ 2.74
PKP3-206ENST00000528036 AMPHP49418 695 aa32.15■■■□□ 2.74
PKP3-206ENST00000528036 LTN1O94822 1766 aa32.13■■■□□ 2.73
PKP3-206ENST00000528036 MAP3K19Q56UN5 1328 aa32.13■■■□□ 2.73
PKP3-206ENST00000528036 TNS2Q63HR2 1409 aa32.13■■■□□ 2.73
PKP3-206ENST00000528036 WNK3Q9BYP7 1800 aa32.12■■■□□ 2.73
PKP3-206ENST00000528036 PEAK1Q9H792 1746 aa32.12■■■□□ 2.73
PKP3-206ENST00000528036 RTL1A6NKG5 1358 aa32.12■■■□□ 2.73
PKP3-206ENST00000528036 PSDA5PKW4 1024 aaPredicted RBP32.11■■■□□ 2.73
PKP3-206ENST00000528036 EIF4G2P78344 907 aaKnown RBP eCLIP32.11■■■□□ 2.73
PKP3-206ENST00000528036 HOXC9P31274 260 aa32.1■■■□□ 2.73
PKP3-206ENST00000528036 R3HDM1Q15032 1099 aaKnown RBP32.1■■■□□ 2.73
PKP3-206ENST00000528036 GGNBP2Q9H3C7 697 aa32.09■■■□□ 2.73
PKP3-206ENST00000528036 KIF24Q5T7B8 1368 aa32.07■■■□□ 2.72
PKP3-206ENST00000528036 SRCAPQ6ZRS2 3230 aa32.05■■■□□ 2.72
PKP3-206ENST00000528036 LTV1Q96GA3 475 aaPredicted RBP32.04■■■□□ 2.72
PKP3-206ENST00000528036 FAM208AQ9UK61 1670 aaKnown RBP32.03■■■□□ 2.72
PKP3-206ENST00000528036 CARD14Q9BXL6 1004 aa32.02■■■□□ 2.72
PKP3-206ENST00000528036 SMG6Q86US8 1419 aaKnown RBP32.01■■■□□ 2.72
PKP3-206ENST00000528036 LRP5O75197 1615 aa32.01■■■□□ 2.72
PKP3-206ENST00000528036 RGPD3A6NKT7 1758 aaPredicted RBP32■■■□□ 2.71
PKP3-206ENST00000528036 RGPD4Q7Z3J3 1758 aa32■■■□□ 2.71
PKP3-206ENST00000528036 RREB1Q92766 1687 aa32■■■□□ 2.71
PKP3-206ENST00000528036 NSD3Q9BZ95 1437 aa32■■■□□ 2.71
PKP3-206ENST00000528036 CGNL1Q0VF96 1302 aa32■■■□□ 2.71
PKP3-206ENST00000528036 RRS1Q15050 365 aaKnown RBP31.99■■■□□ 2.71
PKP3-206ENST00000528036 SBF2Q86WG5 1849 aa31.98■■■□□ 2.71
PKP3-206ENST00000528036 INSRP06213 1382 aa31.96■■■□□ 2.71
PKP3-206ENST00000528036 FLT4P35916 1363 aa31.96■■■□□ 2.71
PKP3-206ENST00000528036 HSPA5P11021 654 aaKnown RBP31.96■■■□□ 2.71
PKP3-206ENST00000528036 FBLN1P23142 703 aa31.96■■■□□ 2.71
PKP3-206ENST00000528036 NUP188Q5SRE5 1749 aa31.93■■■□□ 2.7
PKP3-206ENST00000528036 MYOM1P52179 1685 aa31.92■■■□□ 2.7
PKP3-206ENST00000528036 PTF1AQ7RTS3 328 aa31.92■■■□□ 2.7
PKP3-206ENST00000528036 POLR3GLQ9BT43 218 aa31.92■■■□□ 2.7
PKP3-206ENST00000528036 ZCRB1Q8TBF4 217 aaKnown RBP31.91■■■□□ 2.7
PKP3-206ENST00000528036 KIF20BQ96Q89 1820 aa31.91■■■□□ 2.7
PKP3-206ENST00000528036 TXNRD1Q16881 649 aa31.9■■■□□ 2.7
PKP3-206ENST00000528036 DDX54Q8TDD1 881 aaKnown RBP31.9■■■□□ 2.7
PKP3-206ENST00000528036 RAPGEF4Q8WZA2 1011 aa31.9■■■□□ 2.7
PKP3-206ENST00000528036 KCNQ2O43526 872 aa31.89■■■□□ 2.7
PKP3-206ENST00000528036 NBPF6Q5VWK0 638 aa31.88■■■□□ 2.69
PKP3-206ENST00000528036 PROM2Q8N271 834 aa31.88■■■□□ 2.69
PKP3-206ENST00000528036 ACSBG1Q96GR2 724 aa31.88■■■□□ 2.69
PKP3-206ENST00000528036 NBPF4Q96M43 638 aa31.88■■■□□ 2.69
PKP3-206ENST00000528036 HSP90AB2PQ58FF8 381 aa31.87■■■□□ 2.69
PKP3-206ENST00000528036 NHSQ6T4R5 1651 aa31.86■■■□□ 2.69
PKP3-206ENST00000528036 TATP17735 454 aaPredicted RBP31.85■■■□□ 2.69
PKP3-206ENST00000528036 STK32BQ9NY57 414 aa31.84■■■□□ 2.69
PKP3-206ENST00000528036 SPON1Q9HCB6 807 aa31.83■■■□□ 2.69
PKP3-206ENST00000528036 WASHC2AQ641Q2 1341 aa31.82■■■□□ 2.68
PKP3-206ENST00000528036 EMILIN1Q9Y6C2 1016 aa31.81■■■□□ 2.68
PKP3-206ENST00000528036 NSD2O96028 1365 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms