RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 ARHGEF25Q86VW2 580 aa27.05■■□□□ 1.92
CAPN1-211ENST00000527739 AXIN2Q9Y2T1 843 aa27.05■■□□□ 1.92
CAPN1-211ENST00000527739 SLIT3O75094 1523 aa27.05■■□□□ 1.92
CAPN1-211ENST00000527739 PIK3C2AO00443 1686 aa27.05■■□□□ 1.92
CAPN1-211ENST00000527739 CSB-PGBD3P0DP91 1061 aa27.04■■□□□ 1.92
CAPN1-211ENST00000527739 TIMELESSQ9UNS1 1208 aa27.04■■□□□ 1.92
CAPN1-211ENST00000527739 THRAP3Q9Y2W1 955 aaKnown RBP27.04■■□□□ 1.92
CAPN1-211ENST00000527739 COL5A2P05997 1499 aaPredicted RBP27.03■■□□□ 1.92
CAPN1-211ENST00000527739 USP47Q96K76 1375 aa27.02■■□□□ 1.92
CAPN1-211ENST00000527739 TMF1P82094 1093 aa27.02■■□□□ 1.92
CAPN1-211ENST00000527739 CCER1Q8TC90 406 aaPredicted RBP27.02■■□□□ 1.92
CAPN1-211ENST00000527739 CLSPNQ9HAW4 1339 aa27.01■■□□□ 1.91
CAPN1-211ENST00000527739 CD163L1Q9NR16 1453 aa27■■□□□ 1.91
CAPN1-211ENST00000527739 AKAP12Q02952 1782 aa27■■□□□ 1.91
CAPN1-211ENST00000527739 CRB1P82279 1406 aa26.99■■□□□ 1.91
CAPN1-211ENST00000527739 A0A1W2PP64 1363 aa26.99■■□□□ 1.91
CAPN1-211ENST00000527739 RREB1Q92766 1687 aa26.98■■□□□ 1.91
CAPN1-211ENST00000527739 EDC4Q6P2E9 1401 aaKnown RBP26.97■■□□□ 1.91
CAPN1-211ENST00000527739 USP31Q70CQ4 1352 aa26.97■■□□□ 1.91
CAPN1-211ENST00000527739 PARP4Q9UKK3 1724 aaKnown RBP26.96■■□□□ 1.91
CAPN1-211ENST00000527739 WDR17Q8IZU2 1322 aa26.96■■□□□ 1.91
CAPN1-211ENST00000527739 NUP188Q5SRE5 1749 aa26.96■■□□□ 1.91
CAPN1-211ENST00000527739 PARD3Q8TEW0 1356 aa26.95■■□□□ 1.9
CAPN1-211ENST00000527739 NINLQ9Y2I6 1382 aa26.94■■□□□ 1.9
CAPN1-211ENST00000527739 CDCA8Q53HL2 280 aa26.92■■□□□ 1.9
CAPN1-211ENST00000527739 MON2Q7Z3U7 1717 aa26.91■■□□□ 1.9
CAPN1-211ENST00000527739 DDB1Q16531 1140 aa26.91■■□□□ 1.9
CAPN1-211ENST00000527739 COL18A1P39060 1754 aa26.91■■□□□ 1.9
CAPN1-211ENST00000527739 COG3Q96JB2 828 aa26.9■■□□□ 1.9
CAPN1-211ENST00000527739 CARD10Q9BWT7 1032 aa26.9■■□□□ 1.9
CAPN1-211ENST00000527739 PEAK1Q9H792 1746 aa26.9■■□□□ 1.9
CAPN1-211ENST00000527739 NLRP2Q9NX02 1062 aa26.89■■□□□ 1.9
CAPN1-211ENST00000527739 LRRC37A3O60309 1634 aa26.89■■□□□ 1.9
CAPN1-211ENST00000527739 NFAT5O94916 1531 aa26.89■■□□□ 1.89
CAPN1-211ENST00000527739 CDCA7Q9BWT1 371 aaPredicted RBP26.87■■□□□ 1.89
CAPN1-211ENST00000527739 ANKRD36BQ8N2N9 1353 aa26.85■■□□□ 1.89
CAPN1-211ENST00000527739 OVOS2A0A0G2JMS6 1433 aa26.85■■□□□ 1.89
CAPN1-211ENST00000527739 OVOS2A0A0J9YW53 1432 aa26.85■■□□□ 1.89
CAPN1-211ENST00000527739 OVOS2Q6IE36 1432 aa26.85■■□□□ 1.89
CAPN1-211ENST00000527739 NBPF14Q5TI25 921 aa26.84■■□□□ 1.89
CAPN1-211ENST00000527739 PTF1AQ7RTS3 328 aa26.84■■□□□ 1.89
CAPN1-211ENST00000527739 ANKRD24Q8TF21 1146 aa26.84■■□□□ 1.89
CAPN1-211ENST00000527739 POLR3GLQ9BT43 218 aa26.84■■□□□ 1.89
CAPN1-211ENST00000527739 EXOC5O00471 708 aa26.83■■□□□ 1.89
CAPN1-211ENST00000527739 LTV1Q96GA3 475 aaPredicted RBP26.83■■□□□ 1.89
CAPN1-211ENST00000527739 SBF2Q86WG5 1849 aa26.82■■□□□ 1.88
CAPN1-211ENST00000527739 C11orf95C9JLR9 678 aaPredicted RBP26.82■■□□□ 1.88
CAPN1-211ENST00000527739 GGNBP2Q9H3C7 697 aa26.82■■□□□ 1.88
CAPN1-211ENST00000527739 WNK3Q9BYP7 1800 aa26.81■■□□□ 1.88
CAPN1-211ENST00000527739 FBLN1P23142 703 aa26.81■■□□□ 1.88
CAPN1-211ENST00000527739 ERBB3P21860 1342 aa26.81■■□□□ 1.88
CAPN1-211ENST00000527739 CCDC7Q96M83 1385 aa26.81■■□□□ 1.88
CAPN1-211ENST00000527739 RGPD5Q99666 1765 aa26.81■■□□□ 1.88
CAPN1-211ENST00000527739 AMPHP49418 695 aa26.8■■□□□ 1.88
CAPN1-211ENST00000527739 MARCH10Q8NA82 808 aaPredicted RBP26.79■■□□□ 1.88
CAPN1-211ENST00000527739 IP6K1Q92551 441 aa26.79■■□□□ 1.88
CAPN1-211ENST00000527739 FYB1O15117 783 aa26.78■■□□□ 1.88
CAPN1-211ENST00000527739 MAP3K19Q56UN5 1328 aa26.76■■□□□ 1.87
CAPN1-211ENST00000527739 ABCC6O95255 1503 aa26.75■■□□□ 1.87
CAPN1-211ENST00000527739 EIF4G2P78344 907 aaKnown RBP eCLIP26.75■■□□□ 1.87
CAPN1-211ENST00000527739 ANO8Q9HCE9 1232 aaPredicted RBP26.75■■□□□ 1.87
CAPN1-211ENST00000527739 RGPD3A6NKT7 1758 aaPredicted RBP26.75■■□□□ 1.87
CAPN1-211ENST00000527739 RGPD4Q7Z3J3 1758 aa26.75■■□□□ 1.87
CAPN1-211ENST00000527739 PLSCR1O15162 318 aa26.74■■□□□ 1.87
CAPN1-211ENST00000527739 IL2RBP14784 551 aa26.74■■□□□ 1.87
CAPN1-211ENST00000527739 BCL11BQ9C0K0 894 aaPredicted RBP26.74■■□□□ 1.87
CAPN1-211ENST00000527739 RRS1Q15050 365 aaKnown RBP26.73■■□□□ 1.87
CAPN1-211ENST00000527739 USP54Q70EL1 1684 aa26.73■■□□□ 1.87
CAPN1-211ENST00000527739 KCNQ2O43526 872 aa26.72■■□□□ 1.87
CAPN1-211ENST00000527739 HSPA5P11021 654 aaKnown RBP26.72■■□□□ 1.87
CAPN1-211ENST00000527739 HOXC9P31274 260 aa26.72■■□□□ 1.87
CAPN1-211ENST00000527739 PROM2Q8N271 834 aa26.72■■□□□ 1.87
CAPN1-211ENST00000527739 CARD14Q9BXL6 1004 aa26.72■■□□□ 1.87
CAPN1-211ENST00000527739 SPON1Q9HCB6 807 aa26.71■■□□□ 1.87
CAPN1-211ENST00000527739 PDGFDQ9GZP0 370 aaPredicted RBP26.69■■□□□ 1.86
CAPN1-211ENST00000527739 BCL9O00512 1426 aa26.68■■□□□ 1.86
CAPN1-211ENST00000527739 LTN1O94822 1766 aa26.68■■□□□ 1.86
CAPN1-211ENST00000527739 NSD3Q9BZ95 1437 aa26.67■■□□□ 1.86
CAPN1-211ENST00000527739 CASZ1Q86V15 1759 aa26.67■■□□□ 1.86
CAPN1-211ENST00000527739 PPP1R1BQ9UD71 204 aaPredicted RBP26.67■■□□□ 1.86
CAPN1-211ENST00000527739 ACSBG1Q96GR2 724 aa26.66■■□□□ 1.86
CAPN1-211ENST00000527739 DDX54Q8TDD1 881 aaKnown RBP26.64■■□□□ 1.86
CAPN1-211ENST00000527739 TNS2Q63HR2 1409 aa26.64■■□□□ 1.85
CAPN1-211ENST00000527739 PPM1GO15355 546 aaPredicted RBP26.61■■□□□ 1.85
CAPN1-211ENST00000527739 TXNRD1Q16881 649 aa26.61■■□□□ 1.85
CAPN1-211ENST00000527739 HSP90AB2PQ58FF8 381 aa26.6■■□□□ 1.85
CAPN1-211ENST00000527739 CGNL1Q0VF96 1302 aa26.6■■□□□ 1.85
CAPN1-211ENST00000527739 RTL1A6NKG5 1358 aa26.59■■□□□ 1.85
CAPN1-211ENST00000527739 ZBTB7AO95365 584 aa26.59■■□□□ 1.85
CAPN1-211ENST00000527739 USHBP1Q8N6Y0 703 aa26.59■■□□□ 1.85
CAPN1-211ENST00000527739 YY1P25490 414 aa26.58■■□□□ 1.85
CAPN1-211ENST00000527739 NBPF6Q5VWK0 638 aa26.58■■□□□ 1.85
CAPN1-211ENST00000527739 NBPF4Q96M43 638 aa26.58■■□□□ 1.85
CAPN1-211ENST00000527739 EMILIN1Q9Y6C2 1016 aa26.57■■□□□ 1.84
CAPN1-211ENST00000527739 SMG6Q86US8 1419 aaKnown RBP26.56■■□□□ 1.84
CAPN1-211ENST00000527739 NHSQ6T4R5 1651 aa26.56■■□□□ 1.84
CAPN1-211ENST00000527739 TNNT2P45379 298 aaPredicted RBP26.55■■□□□ 1.84
CAPN1-211ENST00000527739 PANK3Q9H999 370 aa26.55■■□□□ 1.84
CAPN1-211ENST00000527739 ATF5Q9Y2D1 282 aaPredicted RBP26.55■■□□□ 1.84
CAPN1-211ENST00000527739 MYOM1P52179 1685 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms