RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 MARCH10Q8NA82 808 aaPredicted RBP23.91■■□□□ 1.42
CHMP4A-203ENST00000527154 WNK3Q9BYP7 1800 aa23.91■■□□□ 1.42
CHMP4A-203ENST00000527154 MAP3K5Q99683 1374 aa23.91■■□□□ 1.42
CHMP4A-203ENST00000527154 CDCA7Q9BWT1 371 aaPredicted RBP23.89■■□□□ 1.41
CHMP4A-203ENST00000527154 FHDC1Q9C0D6 1143 aaPredicted RBP23.89■■□□□ 1.41
CHMP4A-203ENST00000527154 C1QTNF8P60827 252 aa23.88■■□□□ 1.41
CHMP4A-203ENST00000527154 SLC15A2Q16348 729 aa23.88■■□□□ 1.41
CHMP4A-203ENST00000527154 RAB3GAP2Q9H2M9 1393 aa23.88■■□□□ 1.41
CHMP4A-203ENST00000527154 WDR17Q8IZU2 1322 aa23.87■■□□□ 1.41
CHMP4A-203ENST00000527154 PPIP5K1Q6PFW1 1433 aa23.87■■□□□ 1.41
CHMP4A-203ENST00000527154 CHD4Q14839 1912 aa23.87■■□□□ 1.41
CHMP4A-203ENST00000527154 TXNRD1Q16881 649 aa23.87■■□□□ 1.41
CHMP4A-203ENST00000527154 MTFR1LQ9H019 292 aa23.87■■□□□ 1.41
CHMP4A-203ENST00000527154 KIAA1210Q9ULL0 1709 aa23.87■■□□□ 1.41
CHMP4A-203ENST00000527154 USP6P35125 1406 aa23.86■■□□□ 1.41
CHMP4A-203ENST00000527154 ATF5Q9Y2D1 282 aaPredicted RBP23.85■■□□□ 1.41
CHMP4A-203ENST00000527154 AXIN2Q9Y2T1 843 aa23.85■■□□□ 1.41
CHMP4A-203ENST00000527154 TOM1L2Q6ZVM7 507 aa23.83■■□□□ 1.41
CHMP4A-203ENST00000527154 STK32BQ9NY57 414 aa23.83■■□□□ 1.41
CHMP4A-203ENST00000527154 PAPPAQ13219 1627 aa23.83■■□□□ 1.41
CHMP4A-203ENST00000527154 SENP3-EIF4A1A0A087X0R7 540 aa23.82■■□□□ 1.4
CHMP4A-203ENST00000527154 AKAP12Q02952 1782 aa23.82■■□□□ 1.4
CHMP4A-203ENST00000527154 CPSF1Q10570 1443 aaKnown RBP23.82■■□□□ 1.4
CHMP4A-203ENST00000527154 CARD10Q9BWT7 1032 aa23.81■■□□□ 1.4
CHMP4A-203ENST00000527154 PIK3C2AO00443 1686 aa23.8■■□□□ 1.4
CHMP4A-203ENST00000527154 NLRP6P59044 892 aa23.8■■□□□ 1.4
CHMP4A-203ENST00000527154 ARHGEF25Q86VW2 580 aa23.8■■□□□ 1.4
CHMP4A-203ENST00000527154 IFFO2Q5TF58 517 aa23.79■■□□□ 1.4
CHMP4A-203ENST00000527154 TRPM1Q7Z4N2 1603 aa23.78■■□□□ 1.4
CHMP4A-203ENST00000527154 TNS2Q63HR2 1409 aa23.77■■□□□ 1.4
CHMP4A-203ENST00000527154 CEP350Q5VT06 3117 aa23.76■■□□□ 1.39
CHMP4A-203ENST00000527154 ARXQ96QS3 562 aa23.76■■□□□ 1.39
CHMP4A-203ENST00000527154 NHSQ6T4R5 1651 aa23.76■■□□□ 1.39
CHMP4A-203ENST00000527154 ABCC6O95255 1503 aa23.75■■□□□ 1.39
CHMP4A-203ENST00000527154 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
CHMP4A-203ENST00000527154 CABP2Q9NPB3 220 aa23.75■■□□□ 1.39
CHMP4A-203ENST00000527154 GOLGB1Q14789 3259 aaKnown RBP23.75■■□□□ 1.39
CHMP4A-203ENST00000527154 NBPF1Q3BBV0 1214 aa23.74■■□□□ 1.39
CHMP4A-203ENST00000527154 CABP1Q9NZU7 370 aa23.74■■□□□ 1.39
CHMP4A-203ENST00000527154 CENPJQ9HC77 1338 aaPredicted RBP23.74■■□□□ 1.39
CHMP4A-203ENST00000527154 CCDC7Q96M83 1385 aa23.73■■□□□ 1.39
CHMP4A-203ENST00000527154 COL24A1Q17RW2 1714 aa23.73■■□□□ 1.39
CHMP4A-203ENST00000527154 EXOC5O00471 708 aa23.72■■□□□ 1.39
CHMP4A-203ENST00000527154 NFAT5O94916 1531 aa23.72■■□□□ 1.39
CHMP4A-203ENST00000527154 QRICH2Q9H0J4 1663 aa23.71■■□□□ 1.39
CHMP4A-203ENST00000527154 KCNH5Q8NCM2 988 aa23.7■■□□□ 1.38
CHMP4A-203ENST00000527154 ZBTB7CA1YPR0 619 aa23.69■■□□□ 1.38
CHMP4A-203ENST00000527154 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
CHMP4A-203ENST00000527154 ZNF827Q17R98 1081 aa23.67■■□□□ 1.38
CHMP4A-203ENST00000527154 TTC21BQ7Z4L5 1316 aa23.66■■□□□ 1.38
CHMP4A-203ENST00000527154 QSER1Q2KHR3 1735 aa23.65■■□□□ 1.38
CHMP4A-203ENST00000527154 SHANK3Q9BYB0 1731 aa23.65■■□□□ 1.38
CHMP4A-203ENST00000527154 SLC16A10Q8TF71 515 aa23.65■■□□□ 1.38
CHMP4A-203ENST00000527154 LRRC4BQ9NT99 713 aa23.65■■□□□ 1.38
CHMP4A-203ENST00000527154 TTC21AQ8NDW8 1320 aa23.64■■□□□ 1.38
CHMP4A-203ENST00000527154 AKT1S1Q96B36 256 aa23.64■■□□□ 1.37
CHMP4A-203ENST00000527154 ZNF692Q9BU19 519 aaPredicted RBP23.64■■□□□ 1.37
CHMP4A-203ENST00000527154 GIGYF1O75420 1035 aaPredicted RBP23.63■■□□□ 1.37
CHMP4A-203ENST00000527154 BTAF1O14981 1849 aa23.62■■□□□ 1.37
CHMP4A-203ENST00000527154 ERBB3P21860 1342 aa23.61■■□□□ 1.37
CHMP4A-203ENST00000527154 CSB-PGBD3P0DP91 1061 aa23.61■■□□□ 1.37
CHMP4A-203ENST00000527154 GPR162Q16538 588 aa23.6■■□□□ 1.37
CHMP4A-203ENST00000527154 USP54Q70EL1 1684 aa23.6■■□□□ 1.37
CHMP4A-203ENST00000527154 ACSBG1Q96GR2 724 aa23.59■■□□□ 1.37
CHMP4A-203ENST00000527154 USP31Q70CQ4 1352 aa23.58■■□□□ 1.37
CHMP4A-203ENST00000527154 PNPLA7Q6ZV29 1317 aa23.57■■□□□ 1.36
CHMP4A-203ENST00000527154 EVC2Q86UK5 1308 aa23.57■■□□□ 1.36
CHMP4A-203ENST00000527154 SLC27A3Q5K4L6 730 aa23.56■■□□□ 1.36
CHMP4A-203ENST00000527154 IL2RBP14784 551 aa23.55■■□□□ 1.36
CHMP4A-203ENST00000527154 NLGN2Q8NFZ4 835 aa23.52■■□□□ 1.36
CHMP4A-203ENST00000527154 POLD1P28340 1107 aa23.51■■□□□ 1.35
CHMP4A-203ENST00000527154 MON2Q7Z3U7 1717 aa23.5■■□□□ 1.35
CHMP4A-203ENST00000527154 TUBGCP6Q96RT7 1819 aa23.5■■□□□ 1.35
CHMP4A-203ENST00000527154 SOX12O15370 315 aa23.5■■□□□ 1.35
CHMP4A-203ENST00000527154 YBX3P16989 372 aaKnown RBP eCLIP23.49■■□□□ 1.35
CHMP4A-203ENST00000527154 GRIN3BO60391 1043 aa23.48■■□□□ 1.35
CHMP4A-203ENST00000527154 KTN1Q86UP2 1357 aaKnown RBP23.48■■□□□ 1.35
CHMP4A-203ENST00000527154 NLRP2Q9NX02 1062 aa23.47■■□□□ 1.35
CHMP4A-203ENST00000527154 NSD2O96028 1365 aa23.46■■□□□ 1.35
CHMP4A-203ENST00000527154 CD163L1Q9NR16 1453 aa23.46■■□□□ 1.35
CHMP4A-203ENST00000527154 SBNO2Q9Y2G9 1366 aa23.46■■□□□ 1.35
CHMP4A-203ENST00000527154 LY75O60449 1722 aa23.45■■□□□ 1.34
CHMP4A-203ENST00000527154 ADCY9O60503 1353 aa23.45■■□□□ 1.34
CHMP4A-203ENST00000527154 ANKRD24Q8TF21 1146 aa23.44■■□□□ 1.34
CHMP4A-203ENST00000527154 ATP10DQ9P241 1426 aa23.43■■□□□ 1.34
CHMP4A-203ENST00000527154 ANKRD36BQ8N2N9 1353 aa23.43■■□□□ 1.34
CHMP4A-203ENST00000527154 LTN1O94822 1766 aa23.43■■□□□ 1.34
CHMP4A-203ENST00000527154 TFCP2L1Q9NZI6 479 aa23.41■■□□□ 1.34
CHMP4A-203ENST00000527154 PELP1Q8IZL8 1130 aaKnown RBP23.4■■□□□ 1.34
CHMP4A-203ENST00000527154 KLHL34Q8N239 644 aa23.4■■□□□ 1.34
CHMP4A-203ENST00000527154 NME9Q86XW9 330 aa23.38■■□□□ 1.33
CHMP4A-203ENST00000527154 HSPA6P17066 643 aa23.37■■□□□ 1.33
CHMP4A-203ENST00000527154 KCNQ4P56696 695 aa23.37■■□□□ 1.33
CHMP4A-203ENST00000527154 L3MBTL2Q969R5 705 aa23.37■■□□□ 1.33
CHMP4A-203ENST00000527154 FAM208AQ9UK61 1670 aaKnown RBP23.37■■□□□ 1.33
CHMP4A-203ENST00000527154 KAT6BQ8WYB5 2073 aa23.36■■□□□ 1.33
CHMP4A-203ENST00000527154 COL23A1Q86Y22 540 aaPredicted RBP23.36■■□□□ 1.33
CHMP4A-203ENST00000527154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.36■■□□□ 1.33
CHMP4A-203ENST00000527154 IP6K1Q92551 441 aa23.36■■□□□ 1.33
CHMP4A-203ENST00000527154 PRIM1P49642 420 aaKnown RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms