RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 DDB1Q16531 1140 aa26.54■■□□□ 1.84
CDC27-203ENST00000526866 RGPD5Q99666 1765 aa26.54■■□□□ 1.84
CDC27-203ENST00000526866 ZNF692Q9BU19 519 aaPredicted RBP26.53■■□□□ 1.84
CDC27-203ENST00000526866 WDR17Q8IZU2 1322 aa26.53■■□□□ 1.84
CDC27-203ENST00000526866 NEUROD1Q13562 356 aa26.52■■□□□ 1.84
CDC27-203ENST00000526866 ARHGEF25Q86VW2 580 aa26.51■■□□□ 1.83
CDC27-203ENST00000526866 RGPD3A6NKT7 1758 aaPredicted RBP26.5■■□□□ 1.83
CDC27-203ENST00000526866 RGPD4Q7Z3J3 1758 aa26.5■■□□□ 1.83
CDC27-203ENST00000526866 SOX12O15370 315 aa26.49■■□□□ 1.83
CDC27-203ENST00000526866 KCNH5Q8NCM2 988 aa26.49■■□□□ 1.83
CDC27-203ENST00000526866 TTC21AQ8NDW8 1320 aa26.48■■□□□ 1.83
CDC27-203ENST00000526866 PLSCR1O15162 318 aa26.47■■□□□ 1.83
CDC27-203ENST00000526866 PTF1AQ7RTS3 328 aa26.47■■□□□ 1.83
CDC27-203ENST00000526866 MARCH10Q8NA82 808 aaPredicted RBP26.47■■□□□ 1.83
CDC27-203ENST00000526866 NFAT5O94916 1531 aa26.46■■□□□ 1.83
CDC27-203ENST00000526866 KTN1Q86UP2 1357 aaKnown RBP26.45■■□□□ 1.82
CDC27-203ENST00000526866 CDCA7Q9BWT1 371 aaPredicted RBP26.45■■□□□ 1.82
CDC27-203ENST00000526866 BCL11BQ9C0K0 894 aaPredicted RBP26.45■■□□□ 1.82
CDC27-203ENST00000526866 MON2Q7Z3U7 1717 aa26.45■■□□□ 1.82
CDC27-203ENST00000526866 CSB-PGBD3P0DP91 1061 aa26.44■■□□□ 1.82
CDC27-203ENST00000526866 CARD10Q9BWT7 1032 aa26.44■■□□□ 1.82
CDC27-203ENST00000526866 SPON1Q9HCB6 807 aa26.42■■□□□ 1.82
CDC27-203ENST00000526866 BCL9O00512 1426 aa26.42■■□□□ 1.82
CDC27-203ENST00000526866 KCNQ2O43526 872 aa26.41■■□□□ 1.82
CDC27-203ENST00000526866 ANO8Q9HCE9 1232 aaPredicted RBP26.4■■□□□ 1.82
CDC27-203ENST00000526866 PPP1R1BQ9UD71 204 aaPredicted RBP26.39■■□□□ 1.81
CDC27-203ENST00000526866 ABCC6O95255 1503 aa26.38■■□□□ 1.81
CDC27-203ENST00000526866 SBNO2Q9Y2G9 1366 aa26.38■■□□□ 1.81
CDC27-203ENST00000526866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.38■■□□□ 1.81
CDC27-203ENST00000526866 PROM2Q8N271 834 aa26.38■■□□□ 1.81
CDC27-203ENST00000526866 CASZ1Q86V15 1759 aa26.37■■□□□ 1.81
CDC27-203ENST00000526866 EXOC5O00471 708 aa26.37■■□□□ 1.81
CDC27-203ENST00000526866 CCDC7Q96M83 1385 aa26.37■■□□□ 1.81
CDC27-203ENST00000526866 USP54Q70EL1 1684 aa26.36■■□□□ 1.81
CDC27-203ENST00000526866 USP31Q70CQ4 1352 aa26.36■■□□□ 1.81
CDC27-203ENST00000526866 CD163L1Q9NR16 1453 aa26.36■■□□□ 1.81
CDC27-203ENST00000526866 NME9Q86XW9 330 aa26.34■■□□□ 1.81
CDC27-203ENST00000526866 CARD11Q9BXL7 1154 aa26.34■■□□□ 1.81
CDC27-203ENST00000526866 TNS2Q63HR2 1409 aa26.34■■□□□ 1.81
CDC27-203ENST00000526866 LTN1O94822 1766 aa26.33■■□□□ 1.81
CDC27-203ENST00000526866 PDGFDQ9GZP0 370 aaPredicted RBP26.32■■□□□ 1.8
CDC27-203ENST00000526866 TMC1Q8TDI8 760 aa26.31■■□□□ 1.8
CDC27-203ENST00000526866 NINLQ9Y2I6 1382 aa26.31■■□□□ 1.8
CDC27-203ENST00000526866 TXNRD1Q16881 649 aa26.31■■□□□ 1.8
CDC27-203ENST00000526866 ERBB3P21860 1342 aa26.3■■□□□ 1.8
CDC27-203ENST00000526866 SLC12A5Q9H2X9 1139 aa26.29■■□□□ 1.8
CDC27-203ENST00000526866 NHSQ6T4R5 1651 aa26.28■■□□□ 1.8
CDC27-203ENST00000526866 HDGFL2Q7Z4V5 671 aaPredicted RBP26.28■■□□□ 1.8
CDC27-203ENST00000526866 NLRP2Q9NX02 1062 aa26.28■■□□□ 1.8
CDC27-203ENST00000526866 YY1P25490 414 aa26.27■■□□□ 1.8
CDC27-203ENST00000526866 ZBTB7AO95365 584 aa26.26■■□□□ 1.79
CDC27-203ENST00000526866 STK32BQ9NY57 414 aa26.26■■□□□ 1.79
CDC27-203ENST00000526866 EDC4Q6P2E9 1401 aaKnown RBP26.26■■□□□ 1.79
CDC27-203ENST00000526866 ACSBG1Q96GR2 724 aa26.25■■□□□ 1.79
CDC27-203ENST00000526866 SLC15A2Q16348 729 aa26.24■■□□□ 1.79
CDC27-203ENST00000526866 ANKRD24Q8TF21 1146 aa26.24■■□□□ 1.79
CDC27-203ENST00000526866 MYOM1P52179 1685 aa26.23■■□□□ 1.79
CDC27-203ENST00000526866 A0A1W2PP64 1363 aa26.23■■□□□ 1.79
CDC27-203ENST00000526866 IL2RBP14784 551 aa26.23■■□□□ 1.79
CDC27-203ENST00000526866 DCAF8L1A6NGE4 600 aa26.22■■□□□ 1.79
CDC27-203ENST00000526866 PTGER2P43116 358 aa26.22■■□□□ 1.79
CDC27-203ENST00000526866 TERF2IPQ9NYB0 399 aa26.22■■□□□ 1.79
CDC27-203ENST00000526866 ATF5Q9Y2D1 282 aaPredicted RBP26.22■■□□□ 1.79
CDC27-203ENST00000526866 TONSLQ96HA7 1378 aa26.21■■□□□ 1.79
CDC27-203ENST00000526866 BTAF1O14981 1849 aa26.19■■□□□ 1.78
CDC27-203ENST00000526866 PUS7Q96PZ0 661 aaKnown RBP26.18■■□□□ 1.78
CDC27-203ENST00000526866 PAPPAQ13219 1627 aa26.16■■□□□ 1.78
CDC27-203ENST00000526866 KAT6BQ8WYB5 2073 aa26.16■■□□□ 1.78
CDC27-203ENST00000526866 IP6K1Q92551 441 aa26.14■■□□□ 1.78
CDC27-203ENST00000526866 MTFR1LQ9H019 292 aa26.14■■□□□ 1.77
CDC27-203ENST00000526866 FAM208AQ9UK61 1670 aaKnown RBP26.13■■□□□ 1.77
CDC27-203ENST00000526866 LTV1Q96GA3 475 aaPredicted RBP26.13■■□□□ 1.77
CDC27-203ENST00000526866 TESK2Q96S53 571 aa26.13■■□□□ 1.77
CDC27-203ENST00000526866 SGIP1Q9BQI5 828 aa26.12■■□□□ 1.77
CDC27-203ENST00000526866 ST20-MTHFSA0A0A6YYL1 179 aa26.11■■□□□ 1.77
CDC27-203ENST00000526866 FHDC1Q9C0D6 1143 aaPredicted RBP26.11■■□□□ 1.77
CDC27-203ENST00000526866 ZNF827Q17R98 1081 aa26.09■■□□□ 1.77
CDC27-203ENST00000526866 DDX54Q8TDD1 881 aaKnown RBP26.09■■□□□ 1.77
CDC27-203ENST00000526866 SYT17Q9BSW7 474 aa26.09■■□□□ 1.77
CDC27-203ENST00000526866 LRRC4BQ9NT99 713 aa26.09■■□□□ 1.77
CDC27-203ENST00000526866 COG3Q96JB2 828 aa26.08■■□□□ 1.77
CDC27-203ENST00000526866 MAP3K19Q56UN5 1328 aa26.08■■□□□ 1.77
CDC27-203ENST00000526866 FBLN1P23142 703 aa26.07■■□□□ 1.76
CDC27-203ENST00000526866 RGPD2P0DJD1 1756 aa26.07■■□□□ 1.76
CDC27-203ENST00000526866 HOXC9P31274 260 aa26.05■■□□□ 1.76
CDC27-203ENST00000526866 AMPHP49418 695 aa26.04■■□□□ 1.76
CDC27-203ENST00000526866 DOT1LQ8TEK3 1739 aa26.03■■□□□ 1.76
CDC27-203ENST00000526866 SHANK3Q9BYB0 1731 aa26.03■■□□□ 1.76
CDC27-203ENST00000526866 ARXQ96QS3 562 aa26.03■■□□□ 1.76
CDC27-203ENST00000526866 AKT1S1Q96B36 256 aa26.02■■□□□ 1.76
CDC27-203ENST00000526866 ANKRD36BQ8N2N9 1353 aa26.02■■□□□ 1.76
CDC27-203ENST00000526866 SLC24A1O60721 1099 aa26.01■■□□□ 1.75
CDC27-203ENST00000526866 QSER1Q2KHR3 1735 aa26■■□□□ 1.75
CDC27-203ENST00000526866 SLC27A3Q5K4L6 730 aa26■■□□□ 1.75
CDC27-203ENST00000526866 UTRNP46939 3433 aa26■■□□□ 1.75
CDC27-203ENST00000526866 MEGF6O75095 1541 aa26■■□□□ 1.75
CDC27-203ENST00000526866 PRIM1P49642 420 aaKnown RBP25.99■■□□□ 1.75
CDC27-203ENST00000526866 SYTL4Q96C24 671 aaPredicted RBP25.99■■□□□ 1.75
CDC27-203ENST00000526866 NSD2O96028 1365 aa25.98■■□□□ 1.75
CDC27-203ENST00000526866 KCNQ4P56696 695 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms