RNA–Protein interactions for RNA: ENST00000526131.1

AP004247.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP004247.2, Length 1,890 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.2-201ENST00000526131 PLCH1Q4KWH8 1693 aa15□□□□□ -0.01
AP004247.2-201ENST00000526131 NPC1L1Q9UHC9 1359 aa14.99□□□□□ -0.01
AP004247.2-201ENST00000526131 MTHFSP49914 203 aa14.99□□□□□ -0.01
AP004247.2-201ENST00000526131 ARHGEF25Q86VW2 580 aa14.99□□□□□ -0.01
AP004247.2-201ENST00000526131 PRKRIP1Q9H875 184 aaPredicted RBP14.99□□□□□ -0.01
AP004247.2-201ENST00000526131 AXIN2Q9Y2T1 843 aa14.99□□□□□ -0.01
AP004247.2-201ENST00000526131 PARD3Q8TEW0 1356 aa14.99□□□□□ -0.01
AP004247.2-201ENST00000526131 PPP2R1AP30153 589 aa14.99□□□□□ -0.01
AP004247.2-201ENST00000526131 CSB-PGBD3P0DP91 1061 aa14.97□□□□□ -0.01
AP004247.2-201ENST00000526131 HSP90AB2PQ58FF8 381 aa14.97□□□□□ -0.01
AP004247.2-201ENST00000526131 USP35Q9P2H5 1018 aa14.97□□□□□ -0.01
AP004247.2-201ENST00000526131 CCDC9Q9Y3X0 531 aaKnown RBP14.97□□□□□ -0.01
AP004247.2-201ENST00000526131 COL14A1Q05707 1796 aaKnown RBP14.97□□□□□ -0.01
AP004247.2-201ENST00000526131 HOXC9P31274 260 aa14.97□□□□□ -0.01
AP004247.2-201ENST00000526131 EVA1CP58658 441 aa14.97□□□□□ -0.01
AP004247.2-201ENST00000526131 AFF2P51816 1311 aa14.96□□□□□ -0.01
AP004247.2-201ENST00000526131 RALBP1Q15311 655 aa14.96□□□□□ -0.01
AP004247.2-201ENST00000526131 CPDO75976 1380 aa14.96□□□□□ -0.02
AP004247.2-201ENST00000526131 RGPD2P0DJD1 1756 aa14.96□□□□□ -0.02
AP004247.2-201ENST00000526131 CAMTA1Q9Y6Y1 1673 aa14.95□□□□□ -0.02
AP004247.2-201ENST00000526131 COL18A1P39060 1754 aa14.95□□□□□ -0.02
AP004247.2-201ENST00000526131 AATKQ6ZMQ8 1374 aa14.95□□□□□ -0.02
AP004247.2-201ENST00000526131 USP21Q9UK80 565 aa14.95□□□□□ -0.02
AP004247.2-201ENST00000526131 MYBBP1AQ9BQG0 1328 aaKnown RBP14.95□□□□□ -0.02
AP004247.2-201ENST00000526131 FLT4P35916 1363 aa14.94□□□□□ -0.02
AP004247.2-201ENST00000526131 LMO7Q8WWI1 1683 aa14.94□□□□□ -0.02
AP004247.2-201ENST00000526131 ANKRD24Q8TF21 1146 aa14.93□□□□□ -0.02
AP004247.2-201ENST00000526131 IP6K1Q92551 441 aa14.93□□□□□ -0.02
AP004247.2-201ENST00000526131 MIER1Q8N108 512 aa14.93□□□□□ -0.02
AP004247.2-201ENST00000526131 USHBP1Q8N6Y0 703 aa14.93□□□□□ -0.02
AP004247.2-201ENST00000526131 CCDC184Q52MB2 194 aa14.92□□□□□ -0.02
AP004247.2-201ENST00000526131 LARP1Q6PKG0 1096 aaKnown RBP14.92□□□□□ -0.02
AP004247.2-201ENST00000526131 TOM1L2Q6ZVM7 507 aa14.92□□□□□ -0.02
AP004247.2-201ENST00000526131 NLRP2Q9NX02 1062 aa14.92□□□□□ -0.02
AP004247.2-201ENST00000526131 COL5A2P05997 1499 aaPredicted RBP14.92□□□□□ -0.02
AP004247.2-201ENST00000526131 NRAPQ86VF7 1730 aa14.91□□□□□ -0.02
AP004247.2-201ENST00000526131 NWD2Q9ULI1 1742 aa14.91□□□□□ -0.02
AP004247.2-201ENST00000526131 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
AP004247.2-201ENST00000526131 SLIT2O94813 1529 aa14.9□□□□□ -0.02
AP004247.2-201ENST00000526131 CDK12Q9NYV4 1490 aaPredicted RBP14.9□□□□□ -0.02
AP004247.2-201ENST00000526131 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
AP004247.2-201ENST00000526131 RTL1A6NKG5 1358 aa14.9□□□□□ -0.02
AP004247.2-201ENST00000526131 ERBB3P21860 1342 aa14.9□□□□□ -0.02
AP004247.2-201ENST00000526131 EIF4A2Q14240 407 aaKnown RBP14.9□□□□□ -0.02
AP004247.2-201ENST00000526131 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
AP004247.2-201ENST00000526131 CFAP53Q96M91 514 aa14.9□□□□□ -0.02
AP004247.2-201ENST00000526131 BCL9LQ86UU0 1499 aa14.89□□□□□ -0.03
AP004247.2-201ENST00000526131 A0A0G2JS52 829 aa14.89□□□□□ -0.03
AP004247.2-201ENST00000526131 MYT1Q01538 1121 aa14.89□□□□□ -0.03
AP004247.2-201ENST00000526131 BLMP54132 1417 aaPredicted RBP14.89□□□□□ -0.03
AP004247.2-201ENST00000526131 INSRP06213 1382 aa14.89□□□□□ -0.03
AP004247.2-201ENST00000526131 MRS2Q9HD23 443 aa14.89□□□□□ -0.03
AP004247.2-201ENST00000526131 DIAPH1O60610 1272 aaKnown RBP14.88□□□□□ -0.03
AP004247.2-201ENST00000526131 FNBP4Q8N3X1 1017 aaPredicted RBP14.88□□□□□ -0.03
AP004247.2-201ENST00000526131 HMOX1P09601 288 aa14.87□□□□□ -0.03
AP004247.2-201ENST00000526131 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
AP004247.2-201ENST00000526131 WDR17Q8IZU2 1322 aa14.87□□□□□ -0.03
AP004247.2-201ENST00000526131 KCNA4P22459 653 aa14.86□□□□□ -0.03
AP004247.2-201ENST00000526131 NBPF6Q5VWK0 638 aa14.86□□□□□ -0.03
AP004247.2-201ENST00000526131 NBPF4Q96M43 638 aa14.86□□□□□ -0.03
AP004247.2-201ENST00000526131 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
AP004247.2-201ENST00000526131 EYA1Q99502 592 aa14.85□□□□□ -0.03
AP004247.2-201ENST00000526131 RGS17Q9UGC6 210 aaPredicted RBP14.85□□□□□ -0.03
AP004247.2-201ENST00000526131 KIF24Q5T7B8 1368 aa14.85□□□□□ -0.03
AP004247.2-201ENST00000526131 COL3A1P02461 1466 aaPredicted RBP14.85□□□□□ -0.03
AP004247.2-201ENST00000526131 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.85□□□□□ -0.03
AP004247.2-201ENST00000526131 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 IL13P35225 146 aa14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 FAM98CQ17RN3 349 aaKnown RBP14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 ZNF772Q68DY9 489 aaPredicted RBP14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 AEBP1Q8IUX7 1158 aa14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 TRPC5Q9UL62 973 aaPredicted RBP14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 ABCC6O95255 1503 aa14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 CRB1P82279 1406 aa14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
AP004247.2-201ENST00000526131 SULT6B1Q6IMI4 303 aa14.83□□□□□ -0.04
AP004247.2-201ENST00000526131 FAM208AQ9UK61 1670 aaKnown RBP14.83□□□□□ -0.04
AP004247.2-201ENST00000526131 WDR43Q15061 677 aaKnown RBP eCLIP14.82□□□□□ -0.04
AP004247.2-201ENST00000526131 VPS72Q15906 364 aa14.82□□□□□ -0.04
AP004247.2-201ENST00000526131 POTEAQ6S8J7 498 aa14.82□□□□□ -0.04
AP004247.2-201ENST00000526131 FAM9BQ8IZU0 186 aa14.82□□□□□ -0.04
AP004247.2-201ENST00000526131 HOXD11P31277 338 aaPredicted RBP14.82□□□□□ -0.04
AP004247.2-201ENST00000526131 GJD4Q96KN9 370 aaPredicted RBP14.82□□□□□ -0.04
AP004247.2-201ENST00000526131 NUDCQ9Y266 331 aa14.82□□□□□ -0.04
AP004247.2-201ENST00000526131 SPATA31A1Q5TZJ5 1347 aa14.81□□□□□ -0.04
AP004247.2-201ENST00000526131 SPATA31A5Q5VU36 1347 aa14.81□□□□□ -0.04
AP004247.2-201ENST00000526131 SPATA31A7Q8IWB4 1347 aa14.81□□□□□ -0.04
AP004247.2-201ENST00000526131 GLI3P10071 1580 aa14.81□□□□□ -0.04
AP004247.2-201ENST00000526131 TCP11L2Q8N4U5 519 aa14.8□□□□□ -0.04
AP004247.2-201ENST00000526131 CARD10Q9BWT7 1032 aa14.8□□□□□ -0.04
AP004247.2-201ENST00000526131 ATRNO75882 1429 aa14.8□□□□□ -0.04
AP004247.2-201ENST00000526131 RGPD1P0DJD0 1748 aa14.79□□□□□ -0.04
AP004247.2-201ENST00000526131 KAT6BQ8WYB5 2073 aa14.79□□□□□ -0.04
AP004247.2-201ENST00000526131 CCDC146Q8IYE0 955 aa14.79□□□□□ -0.04
AP004247.2-201ENST00000526131 RAPGEF4Q8WZA2 1011 aa14.78□□□□□ -0.04
AP004247.2-201ENST00000526131 IGSF1Q8N6C5 1336 aa14.78□□□□□ -0.04
AP004247.2-201ENST00000526131 WNK3Q9BYP7 1800 aa14.78□□□□□ -0.04
AP004247.2-201ENST00000526131 RXRBP28702 533 aa14.78□□□□□ -0.04
AP004247.2-201ENST00000526131 MEGF6O75095 1541 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms