RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 ANKRD36BQ8N2N9 1353 aa23.76■■□□□ 1.39
CCS-203ENST00000526058 FAM182BQ5T319 152 aa23.75■■□□□ 1.39
CCS-203ENST00000526058 BARGINQ6ZT62 677 aa23.75■■□□□ 1.39
CCS-203ENST00000526058 CCDC125Q86Z20 511 aa23.75■■□□□ 1.39
CCS-203ENST00000526058 OVOS2A0A0J9YW53 1432 aa23.74■■□□□ 1.39
CCS-203ENST00000526058 CRB1P82279 1406 aa23.74■■□□□ 1.39
CCS-203ENST00000526058 OVOS2Q6IE36 1432 aa23.74■■□□□ 1.39
CCS-203ENST00000526058 LTN1O94822 1766 aa23.73■■□□□ 1.39
CCS-203ENST00000526058 BLMP54132 1417 aaPredicted RBP23.72■■□□□ 1.39
CCS-203ENST00000526058 MYOM1P52179 1685 aa23.72■■□□□ 1.39
CCS-203ENST00000526058 WDR17Q8IZU2 1322 aa23.71■■□□□ 1.39
CCS-203ENST00000526058 HSPA5P11021 654 aaKnown RBP23.71■■□□□ 1.39
CCS-203ENST00000526058 EIF4G2P78344 907 aaKnown RBP eCLIP23.71■■□□□ 1.39
CCS-203ENST00000526058 TOM1L2Q6ZVM7 507 aa23.71■■□□□ 1.39
CCS-203ENST00000526058 THRAP3Q9Y2W1 955 aaKnown RBP23.71■■□□□ 1.39
CCS-203ENST00000526058 CSB-PGBD3P0DP91 1061 aa23.68■■□□□ 1.38
CCS-203ENST00000526058 COG3Q96JB2 828 aa23.68■■□□□ 1.38
CCS-203ENST00000526058 ABCC6O95255 1503 aa23.68■■□□□ 1.38
CCS-203ENST00000526058 PARP4Q9UKK3 1724 aaKnown RBP23.67■■□□□ 1.38
CCS-203ENST00000526058 FYB1O15117 783 aa23.66■■□□□ 1.38
CCS-203ENST00000526058 DEFB132Q7Z7B7 95 aa23.66■■□□□ 1.38
CCS-203ENST00000526058 FBLN1P23142 703 aa23.65■■□□□ 1.38
CCS-203ENST00000526058 PDE3BQ13370 1112 aa23.65■■□□□ 1.38
CCS-203ENST00000526058 POLR3GLQ9BT43 218 aa23.65■■□□□ 1.38
CCS-203ENST00000526058 CARD14Q9BXL6 1004 aa23.65■■□□□ 1.38
CCS-203ENST00000526058 GGNBP2Q9H3C7 697 aa23.65■■□□□ 1.38
CCS-203ENST00000526058 WNK3Q9BYP7 1800 aa23.64■■□□□ 1.38
CCS-203ENST00000526058 SF3B2Q13435 895 aaKnown RBP23.64■■□□□ 1.37
CCS-203ENST00000526058 KIF20BQ96Q89 1820 aa23.63■■□□□ 1.37
CCS-203ENST00000526058 CARD10Q9BWT7 1032 aa23.63■■□□□ 1.37
CCS-203ENST00000526058 RGPD1P0DJD0 1748 aa23.62■■□□□ 1.37
CCS-203ENST00000526058 ERBB3P21860 1342 aa23.61■■□□□ 1.37
CCS-203ENST00000526058 FAM196AQ6ZSG2 479 aa23.61■■□□□ 1.37
CCS-203ENST00000526058 LRRC37A3O60309 1634 aa23.61■■□□□ 1.37
CCS-203ENST00000526058 NSD3Q9BZ95 1437 aa23.6■■□□□ 1.37
CCS-203ENST00000526058 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
CCS-203ENST00000526058 ANKRD24Q8TF21 1146 aa23.59■■□□□ 1.37
CCS-203ENST00000526058 IP6K1Q92551 441 aa23.59■■□□□ 1.37
CCS-203ENST00000526058 TRIM37O94972 964 aa23.58■■□□□ 1.37
CCS-203ENST00000526058 DDB1Q16531 1140 aa23.58■■□□□ 1.37
CCS-203ENST00000526058 NLRP2Q9NX02 1062 aa23.58■■□□□ 1.37
CCS-203ENST00000526058 TNS1Q9HBL0 1735 aaKnown RBP23.58■■□□□ 1.37
CCS-203ENST00000526058 CCDC7Q96M83 1385 aa23.57■■□□□ 1.36
CCS-203ENST00000526058 C11orf95C9JLR9 678 aaPredicted RBP23.57■■□□□ 1.36
CCS-203ENST00000526058 DISP2A7MBM2 1401 aa23.57■■□□□ 1.36
CCS-203ENST00000526058 RRS1Q15050 365 aaKnown RBP23.56■■□□□ 1.36
CCS-203ENST00000526058 HOXC9P31274 260 aa23.55■■□□□ 1.36
CCS-203ENST00000526058 BAG6P46379 1132 aa23.55■■□□□ 1.36
CCS-203ENST00000526058 AMPHP49418 695 aa23.55■■□□□ 1.36
CCS-203ENST00000526058 LTV1Q96GA3 475 aaPredicted RBP23.55■■□□□ 1.36
CCS-203ENST00000526058 CDCA7Q9BWT1 371 aaPredicted RBP23.55■■□□□ 1.36
CCS-203ENST00000526058 PEAK1Q9H792 1746 aa23.54■■□□□ 1.36
CCS-203ENST00000526058 EN1Q05925 392 aaPredicted RBP23.54■■□□□ 1.36
CCS-203ENST00000526058 RGPD2P0DJD1 1756 aa23.51■■□□□ 1.35
CCS-203ENST00000526058 MARCH10Q8NA82 808 aaPredicted RBP23.51■■□□□ 1.35
CCS-203ENST00000526058 OVOS2A0A0G2JMS6 1433 aa23.5■■□□□ 1.35
CCS-203ENST00000526058 SBF2Q86WG5 1849 aa23.5■■□□□ 1.35
CCS-203ENST00000526058 EXOC5O00471 708 aa23.5■■□□□ 1.35
CCS-203ENST00000526058 FAM208AQ9UK61 1670 aaKnown RBP23.5■■□□□ 1.35
CCS-203ENST00000526058 PANK3Q9H999 370 aa23.49■■□□□ 1.35
CCS-203ENST00000526058 CGNL1Q0VF96 1302 aa23.49■■□□□ 1.35
CCS-203ENST00000526058 SRCAPQ6ZRS2 3230 aa23.48■■□□□ 1.35
CCS-203ENST00000526058 APBA3O96018 575 aa23.48■■□□□ 1.35
CCS-203ENST00000526058 IL2RBP14784 551 aa23.48■■□□□ 1.35
CCS-203ENST00000526058 RTL1A6NKG5 1358 aa23.48■■□□□ 1.35
CCS-203ENST00000526058 EZH2Q15910 746 aaKnown RBP23.47■■□□□ 1.35
CCS-203ENST00000526058 TNS2Q63HR2 1409 aa23.46■■□□□ 1.35
CCS-203ENST00000526058 HSP90AB2PQ58FF8 381 aa23.45■■□□□ 1.34
CCS-203ENST00000526058 CAMKK2Q96RR4 588 aa23.45■■□□□ 1.34
CCS-203ENST00000526058 MAP2P11137 1827 aaKnown RBP23.45■■□□□ 1.34
CCS-203ENST00000526058 EMILIN1Q9Y6C2 1016 aa23.44■■□□□ 1.34
CCS-203ENST00000526058 KIF7Q2M1P5 1343 aa23.43■■□□□ 1.34
CCS-203ENST00000526058 ANKRD26Q9UPS8 1709 aa23.43■■□□□ 1.34
CCS-203ENST00000526058 PTF1AQ7RTS3 328 aa23.43■■□□□ 1.34
CCS-203ENST00000526058 FLT4P35916 1363 aa23.42■■□□□ 1.34
CCS-203ENST00000526058 NBPF6Q5VWK0 638 aa23.42■■□□□ 1.34
CCS-203ENST00000526058 NBPF4Q96M43 638 aa23.42■■□□□ 1.34
CCS-203ENST00000526058 BCL9O00512 1426 aa23.42■■□□□ 1.34
CCS-203ENST00000526058 INSRP06213 1382 aa23.4■■□□□ 1.34
CCS-203ENST00000526058 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
CCS-203ENST00000526058 PPM1GO15355 546 aaPredicted RBP23.39■■□□□ 1.33
CCS-203ENST00000526058 TNNT2P45379 298 aaPredicted RBP23.39■■□□□ 1.33
CCS-203ENST00000526058 USHBP1Q8N6Y0 703 aa23.39■■□□□ 1.33
CCS-203ENST00000526058 BCL11BQ9C0K0 894 aaPredicted RBP23.39■■□□□ 1.33
CCS-203ENST00000526058 SMG6Q86US8 1419 aaKnown RBP23.38■■□□□ 1.33
CCS-203ENST00000526058 RREB1Q92766 1687 aa23.38■■□□□ 1.33
CCS-203ENST00000526058 POLKQ9UBT6 870 aa23.37■■□□□ 1.33
CCS-203ENST00000526058 KAT6BQ8WYB5 2073 aa23.37■■□□□ 1.33
CCS-203ENST00000526058 PARD3Q8TEW0 1356 aa23.37■■□□□ 1.33
CCS-203ENST00000526058 PSDA5PKW4 1024 aaPredicted RBP23.36■■□□□ 1.33
CCS-203ENST00000526058 MEGF6O75095 1541 aa23.36■■□□□ 1.33
CCS-203ENST00000526058 KCNQ2O43526 872 aa23.35■■□□□ 1.33
CCS-203ENST00000526058 ACSBG1Q96GR2 724 aa23.35■■□□□ 1.33
CCS-203ENST00000526058 NUP188Q5SRE5 1749 aa23.34■■□□□ 1.33
CCS-203ENST00000526058 DDX54Q8TDD1 881 aaKnown RBP23.34■■□□□ 1.33
CCS-203ENST00000526058 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
CCS-203ENST00000526058 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.33
CCS-203ENST00000526058 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.33
CCS-203ENST00000526058 NHSQ6T4R5 1651 aa23.32■■□□□ 1.32
CCS-203ENST00000526058 NSD2O96028 1365 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms