RNA–Protein interactions for RNA: ENST00000525957.1

ME3-204, Transcript of malic enzyme 3, humanhuman

TSL 3

Gene ME3, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-204ENST00000525957 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
ME3-204ENST00000525957 WDR17Q8IZU2 1322 aa22.15■■□□□ 1.14
ME3-204ENST00000525957 CSB-PGBD3P0DP91 1061 aa22.15■■□□□ 1.14
ME3-204ENST00000525957 DDB1Q16531 1140 aa22.15■■□□□ 1.14
ME3-204ENST00000525957 SBF2Q86WG5 1849 aa22.14■■□□□ 1.13
ME3-204ENST00000525957 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.13
ME3-204ENST00000525957 NFAT5O94916 1531 aa22.13■■□□□ 1.13
ME3-204ENST00000525957 NBPF14Q5TI25 921 aa22.13■■□□□ 1.13
ME3-204ENST00000525957 ZNF692Q9BU19 519 aaPredicted RBP22.13■■□□□ 1.13
ME3-204ENST00000525957 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
ME3-204ENST00000525957 ARHGEF25Q86VW2 580 aa22.12■■□□□ 1.13
ME3-204ENST00000525957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.12■■□□□ 1.13
ME3-204ENST00000525957 KCNH5Q8NCM2 988 aa22.12■■□□□ 1.13
ME3-204ENST00000525957 PTF1AQ7RTS3 328 aa22.1■■□□□ 1.13
ME3-204ENST00000525957 CARD11Q9BXL7 1154 aa22.09■■□□□ 1.13
ME3-204ENST00000525957 RGPD3A6NKT7 1758 aaPredicted RBP22.08■■□□□ 1.13
ME3-204ENST00000525957 RGPD4Q7Z3J3 1758 aa22.08■■□□□ 1.13
ME3-204ENST00000525957 C11orf95C9JLR9 678 aaPredicted RBP22.08■■□□□ 1.13
ME3-204ENST00000525957 MARCH10Q8NA82 808 aaPredicted RBP22.07■■□□□ 1.12
ME3-204ENST00000525957 TMC1Q8TDI8 760 aa22.07■■□□□ 1.12
ME3-204ENST00000525957 NME9Q86XW9 330 aa22.06■■□□□ 1.12
ME3-204ENST00000525957 CARD10Q9BWT7 1032 aa22.06■■□□□ 1.12
ME3-204ENST00000525957 LTN1O94822 1766 aa22.05■■□□□ 1.12
ME3-204ENST00000525957 SBNO2Q9Y2G9 1366 aa22.05■■□□□ 1.12
ME3-204ENST00000525957 CDCA7Q9BWT1 371 aaPredicted RBP22.05■■□□□ 1.12
ME3-204ENST00000525957 CD163L1Q9NR16 1453 aa22.04■■□□□ 1.12
ME3-204ENST00000525957 TONSLQ96HA7 1378 aa22.04■■□□□ 1.12
ME3-204ENST00000525957 BCL11BQ9C0K0 894 aaPredicted RBP22.04■■□□□ 1.12
ME3-204ENST00000525957 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
ME3-204ENST00000525957 PPP1R1BQ9UD71 204 aaPredicted RBP22.04■■□□□ 1.12
ME3-204ENST00000525957 ABCC6O95255 1503 aa22.04■■□□□ 1.12
ME3-204ENST00000525957 USP54Q70EL1 1684 aa22.03■■□□□ 1.12
ME3-204ENST00000525957 TNS2Q63HR2 1409 aa22.03■■□□□ 1.12
ME3-204ENST00000525957 CCDC7Q96M83 1385 aa22.02■■□□□ 1.12
ME3-204ENST00000525957 SPON1Q9HCB6 807 aa22.02■■□□□ 1.12
ME3-204ENST00000525957 HDGFL2Q7Z4V5 671 aaPredicted RBP22.01■■□□□ 1.11
ME3-204ENST00000525957 PLSCR1O15162 318 aa22■■□□□ 1.11
ME3-204ENST00000525957 NLRP2Q9NX02 1062 aa22■■□□□ 1.11
ME3-204ENST00000525957 USP31Q70CQ4 1352 aa21.99■■□□□ 1.11
ME3-204ENST00000525957 EXOC5O00471 708 aa21.99■■□□□ 1.11
ME3-204ENST00000525957 KCNQ2O43526 872 aa21.99■■□□□ 1.11
ME3-204ENST00000525957 SLC12A5Q9H2X9 1139 aa21.99■■□□□ 1.11
ME3-204ENST00000525957 EDC4Q6P2E9 1401 aaKnown RBP21.98■■□□□ 1.11
ME3-204ENST00000525957 CASZ1Q86V15 1759 aa21.98■■□□□ 1.11
ME3-204ENST00000525957 ERBB3P21860 1342 aa21.98■■□□□ 1.11
ME3-204ENST00000525957 A0A1W2PP64 1363 aa21.98■■□□□ 1.11
ME3-204ENST00000525957 BCL9O00512 1426 aa21.97■■□□□ 1.11
ME3-204ENST00000525957 NHSQ6T4R5 1651 aa21.96■■□□□ 1.11
ME3-204ENST00000525957 ACSBG1Q96GR2 724 aa21.96■■□□□ 1.11
ME3-204ENST00000525957 PDGFDQ9GZP0 370 aaPredicted RBP21.96■■□□□ 1.11
ME3-204ENST00000525957 PROM2Q8N271 834 aa21.95■■□□□ 1.1
ME3-204ENST00000525957 ANKRD24Q8TF21 1146 aa21.95■■□□□ 1.1
ME3-204ENST00000525957 ZBTB7AO95365 584 aa21.94■■□□□ 1.1
ME3-204ENST00000525957 TXNRD1Q16881 649 aa21.94■■□□□ 1.1
ME3-204ENST00000525957 TERF2IPQ9NYB0 399 aa21.94■■□□□ 1.1
ME3-204ENST00000525957 IL2RBP14784 551 aa21.92■■□□□ 1.1
ME3-204ENST00000525957 MYOM1P52179 1685 aa21.91■■□□□ 1.1
ME3-204ENST00000525957 NINLQ9Y2I6 1382 aa21.91■■□□□ 1.1
ME3-204ENST00000525957 LTV1Q96GA3 475 aaPredicted RBP21.91■■□□□ 1.1
ME3-204ENST00000525957 STK32BQ9NY57 414 aa21.91■■□□□ 1.1
ME3-204ENST00000525957 BTAF1O14981 1849 aa21.9■■□□□ 1.1
ME3-204ENST00000525957 KAT6BQ8WYB5 2073 aa21.88■■□□□ 1.09
ME3-204ENST00000525957 YY1P25490 414 aa21.88■■□□□ 1.09
ME3-204ENST00000525957 ATF5Q9Y2D1 282 aaPredicted RBP21.88■■□□□ 1.09
ME3-204ENST00000525957 ST20-MTHFSA0A0A6YYL1 179 aa21.87■■□□□ 1.09
ME3-204ENST00000525957 FAM208AQ9UK61 1670 aaKnown RBP21.87■■□□□ 1.09
ME3-204ENST00000525957 SLC15A2Q16348 729 aa21.86■■□□□ 1.09
ME3-204ENST00000525957 TESK2Q96S53 571 aa21.86■■□□□ 1.09
ME3-204ENST00000525957 DCAF8L1A6NGE4 600 aa21.85■■□□□ 1.09
ME3-204ENST00000525957 COG3Q96JB2 828 aa21.84■■□□□ 1.09
ME3-204ENST00000525957 PAPPAQ13219 1627 aa21.84■■□□□ 1.09
ME3-204ENST00000525957 FBLN1P23142 703 aa21.83■■□□□ 1.09
ME3-204ENST00000525957 DDX54Q8TDD1 881 aaKnown RBP21.83■■□□□ 1.09
ME3-204ENST00000525957 IP6K1Q92551 441 aa21.83■■□□□ 1.09
ME3-204ENST00000525957 RGPD2P0DJD1 1756 aa21.82■■□□□ 1.08
ME3-204ENST00000525957 PTGER2P43116 358 aa21.82■■□□□ 1.08
ME3-204ENST00000525957 PUS7Q96PZ0 661 aaKnown RBP21.82■■□□□ 1.08
ME3-204ENST00000525957 MAP3K19Q56UN5 1328 aa21.81■■□□□ 1.08
ME3-204ENST00000525957 AMPHP49418 695 aa21.8■■□□□ 1.08
ME3-204ENST00000525957 DOT1LQ8TEK3 1739 aa21.8■■□□□ 1.08
ME3-204ENST00000525957 ANKRD36BQ8N2N9 1353 aa21.79■■□□□ 1.08
ME3-204ENST00000525957 HOXC9P31274 260 aa21.79■■□□□ 1.08
ME3-204ENST00000525957 ZNF827Q17R98 1081 aa21.78■■□□□ 1.08
ME3-204ENST00000525957 SYTL4Q96C24 671 aaPredicted RBP21.78■■□□□ 1.08
ME3-204ENST00000525957 MTFR1LQ9H019 292 aa21.78■■□□□ 1.08
ME3-204ENST00000525957 USP47Q96K76 1375 aa21.77■■□□□ 1.08
ME3-204ENST00000525957 MEGF6O75095 1541 aa21.76■■□□□ 1.07
ME3-204ENST00000525957 RRS1Q15050 365 aaKnown RBP21.76■■□□□ 1.07
ME3-204ENST00000525957 SHANK3Q9BYB0 1731 aa21.76■■□□□ 1.07
ME3-204ENST00000525957 FHDC1Q9C0D6 1143 aaPredicted RBP21.76■■□□□ 1.07
ME3-204ENST00000525957 LRRC4BQ9NT99 713 aa21.76■■□□□ 1.07
ME3-204ENST00000525957 GGNBP2Q9H3C7 697 aa21.75■■□□□ 1.07
ME3-204ENST00000525957 KIF20BQ96Q89 1820 aa21.74■■□□□ 1.07
ME3-204ENST00000525957 KCNQ4P56696 695 aa21.74■■□□□ 1.07
ME3-204ENST00000525957 USHBP1Q8N6Y0 703 aa21.74■■□□□ 1.07
ME3-204ENST00000525957 TMF1P82094 1093 aa21.73■■□□□ 1.07
ME3-204ENST00000525957 RTL1A6NKG5 1358 aa21.73■■□□□ 1.07
ME3-204ENST00000525957 PRIM1P49642 420 aaKnown RBP21.72■■□□□ 1.07
ME3-204ENST00000525957 TUBGCP6Q96RT7 1819 aa21.71■■□□□ 1.07
ME3-204ENST00000525957 SGIP1Q9BQI5 828 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms