RNA–Protein interactions for RNA: ENST00000525912.1

LINC01016-203, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 3

Gene LINC01016, Length 396 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-203ENST00000525912 MAP3K19Q56UN5 1328 aa16.68■□□□□ 0.26
LINC01016-203ENST00000525912 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
LINC01016-203ENST00000525912 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
LINC01016-203ENST00000525912 ZNF772Q68DY9 489 aaPredicted RBP16.67■□□□□ 0.26
LINC01016-203ENST00000525912 LARP1Q6PKG0 1096 aaKnown RBP16.67■□□□□ 0.26
LINC01016-203ENST00000525912 KCNH5Q8NCM2 988 aa16.67■□□□□ 0.26
LINC01016-203ENST00000525912 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
LINC01016-203ENST00000525912 MAP2P11137 1827 aaKnown RBP16.66■□□□□ 0.26
LINC01016-203ENST00000525912 KNSTRNQ9Y448 316 aa16.66■□□□□ 0.26
LINC01016-203ENST00000525912 EMILIN1Q9Y6C2 1016 aa16.66■□□□□ 0.26
LINC01016-203ENST00000525912 COL5A2P05997 1499 aaPredicted RBP16.66■□□□□ 0.26
LINC01016-203ENST00000525912 RGPD2P0DJD1 1756 aa16.64■□□□□ 0.25
LINC01016-203ENST00000525912 VPS72Q15906 364 aa16.63■□□□□ 0.25
LINC01016-203ENST00000525912 TRPC5Q9UL62 973 aaPredicted RBP16.63■□□□□ 0.25
LINC01016-203ENST00000525912 HOXC9P31274 260 aa16.62■□□□□ 0.25
LINC01016-203ENST00000525912 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
LINC01016-203ENST00000525912 GJD4Q96KN9 370 aaPredicted RBP16.62■□□□□ 0.25
LINC01016-203ENST00000525912 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
LINC01016-203ENST00000525912 CCDC9Q9Y3X0 531 aaKnown RBP16.62■□□□□ 0.25
LINC01016-203ENST00000525912 HSP90AB2PQ58FF8 381 aa16.61■□□□□ 0.25
LINC01016-203ENST00000525912 IP6K1Q92551 441 aa16.61■□□□□ 0.25
LINC01016-203ENST00000525912 POLKQ9UBT6 870 aa16.61■□□□□ 0.25
LINC01016-203ENST00000525912 SPATA31A5Q5VU36 1347 aa16.61■□□□□ 0.25
LINC01016-203ENST00000525912 SPATA31A7Q8IWB4 1347 aa16.61■□□□□ 0.25
LINC01016-203ENST00000525912 RGS12O14924 1447 aa16.61■□□□□ 0.25
LINC01016-203ENST00000525912 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
LINC01016-203ENST00000525912 RXRBP28702 533 aa16.6■□□□□ 0.25
LINC01016-203ENST00000525912 EVA1CP58658 441 aa16.6■□□□□ 0.25
LINC01016-203ENST00000525912 MORC1Q86VD1 984 aa16.6■□□□□ 0.25
LINC01016-203ENST00000525912 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
LINC01016-203ENST00000525912 AMPHP49418 695 aa16.59■□□□□ 0.25
LINC01016-203ENST00000525912 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
LINC01016-203ENST00000525912 SPATA31A1Q5TZJ5 1347 aa16.59■□□□□ 0.25
LINC01016-203ENST00000525912 NSD2O96028 1365 aa16.59■□□□□ 0.25
LINC01016-203ENST00000525912 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.24
LINC01016-203ENST00000525912 ANKRD24Q8TF21 1146 aa16.58■□□□□ 0.24
LINC01016-203ENST00000525912 BRWD3Q6RI45 1802 aa16.58■□□□□ 0.24
LINC01016-203ENST00000525912 ERBB3P21860 1342 aa16.57■□□□□ 0.24
LINC01016-203ENST00000525912 WDR17Q8IZU2 1322 aa16.57■□□□□ 0.24
LINC01016-203ENST00000525912 ABCC6O95255 1503 aa16.56■□□□□ 0.24
LINC01016-203ENST00000525912 NPC1L1Q9UHC9 1359 aa16.55■□□□□ 0.24
LINC01016-203ENST00000525912 TOM1L2Q6ZVM7 507 aa16.55■□□□□ 0.24
LINC01016-203ENST00000525912 CRB1P82279 1406 aa16.54■□□□□ 0.24
LINC01016-203ENST00000525912 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
LINC01016-203ENST00000525912 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
LINC01016-203ENST00000525912 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
LINC01016-203ENST00000525912 SMG6Q86US8 1419 aaKnown RBP16.53■□□□□ 0.24
LINC01016-203ENST00000525912 RTL1A6NKG5 1358 aa16.53■□□□□ 0.24
LINC01016-203ENST00000525912 FLT4P35916 1363 aa16.53■□□□□ 0.24
LINC01016-203ENST00000525912 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
LINC01016-203ENST00000525912 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
LINC01016-203ENST00000525912 SEPT12Q8IYM1 358 aa16.53■□□□□ 0.24
LINC01016-203ENST00000525912 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
LINC01016-203ENST00000525912 NLRP2Q9NX02 1062 aa16.53■□□□□ 0.24
LINC01016-203ENST00000525912 FAM208AQ9UK61 1670 aaKnown RBP16.53■□□□□ 0.24
LINC01016-203ENST00000525912 EP400Q96L91 3159 aa16.52■□□□□ 0.24
LINC01016-203ENST00000525912 INSRP06213 1382 aa16.52■□□□□ 0.24
LINC01016-203ENST00000525912 WNK3Q9BYP7 1800 aa16.52■□□□□ 0.24
LINC01016-203ENST00000525912 ONECUT3O60422 494 aaPredicted RBP16.52■□□□□ 0.24
LINC01016-203ENST00000525912 MTHFSP49914 203 aa16.52■□□□□ 0.24
LINC01016-203ENST00000525912 FAM182BQ5T319 152 aa16.52■□□□□ 0.24
LINC01016-203ENST00000525912 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.24
LINC01016-203ENST00000525912 EIF4A2Q14240 407 aaKnown RBP16.51■□□□□ 0.23
LINC01016-203ENST00000525912 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
LINC01016-203ENST00000525912 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
LINC01016-203ENST00000525912 A0A0G2JS52 829 aa16.49■□□□□ 0.23
LINC01016-203ENST00000525912 DISP2A7MBM2 1401 aa16.49■□□□□ 0.23
LINC01016-203ENST00000525912 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
LINC01016-203ENST00000525912 MYT1Q01538 1121 aa16.49■□□□□ 0.23
LINC01016-203ENST00000525912 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
LINC01016-203ENST00000525912 PARD3Q8TEW0 1356 aa16.48■□□□□ 0.23
LINC01016-203ENST00000525912 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
LINC01016-203ENST00000525912 EYA1Q99502 592 aa16.47■□□□□ 0.23
LINC01016-203ENST00000525912 LRRC37A3O60309 1634 aa16.47■□□□□ 0.23
LINC01016-203ENST00000525912 KIF24Q5T7B8 1368 aa16.47■□□□□ 0.23
LINC01016-203ENST00000525912 MEGF6O75095 1541 aa16.46■□□□□ 0.23
LINC01016-203ENST00000525912 PARP4Q9UKK3 1724 aaKnown RBP16.45■□□□□ 0.22
LINC01016-203ENST00000525912 IL13P35225 146 aa16.45■□□□□ 0.22
LINC01016-203ENST00000525912 AEBP1Q8IUX7 1158 aa16.45■□□□□ 0.22
LINC01016-203ENST00000525912 THRAP3Q9Y2W1 955 aaKnown RBP16.44■□□□□ 0.22
LINC01016-203ENST00000525912 RGPD1P0DJD0 1748 aa16.44■□□□□ 0.22
LINC01016-203ENST00000525912 SHANK3Q9BYB0 1731 aa16.43■□□□□ 0.22
LINC01016-203ENST00000525912 NCAPD2Q15021 1401 aa16.43■□□□□ 0.22
LINC01016-203ENST00000525912 KRT27Q7Z3Y8 459 aa16.42■□□□□ 0.22
LINC01016-203ENST00000525912 IL2RBP14784 551 aa16.41■□□□□ 0.22
LINC01016-203ENST00000525912 MARCH10Q8NA82 808 aaPredicted RBP16.41■□□□□ 0.22
LINC01016-203ENST00000525912 PRKRIP1Q9H875 184 aaPredicted RBP16.4■□□□□ 0.22
LINC01016-203ENST00000525912 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
LINC01016-203ENST00000525912 DDB1Q16531 1140 aa16.39■□□□□ 0.21
LINC01016-203ENST00000525912 PTF1AQ7RTS3 328 aa16.39■□□□□ 0.21
LINC01016-203ENST00000525912 HMOX1P09601 288 aa16.38■□□□□ 0.21
LINC01016-203ENST00000525912 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
LINC01016-203ENST00000525912 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
LINC01016-203ENST00000525912 TNS2Q63HR2 1409 aa16.37■□□□□ 0.21
LINC01016-203ENST00000525912 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
LINC01016-203ENST00000525912 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
LINC01016-203ENST00000525912 RALBP1Q15311 655 aa16.36■□□□□ 0.21
LINC01016-203ENST00000525912 UPF1Q92900 1129 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC01016-203ENST00000525912 EXOC5O00471 708 aa16.35■□□□□ 0.21
LINC01016-203ENST00000525912 SOCS7O14512 581 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms