RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 NCOA3Q9Y6Q9 1424 aa8.97□□□□□ -0.97
CCDC90B-204ENST00000525504 UNC13BO14795 1591 aa8.96□□□□□ -0.97
CCDC90B-204ENST00000525504 NUTM2DQ5VT03 806 aaPredicted RBP8.96□□□□□ -0.98
CCDC90B-204ENST00000525504 RBM33Q96EV2 1170 aaKnown RBP8.96□□□□□ -0.98
CCDC90B-204ENST00000525504 IL21Q9HBE4 155 aa8.96□□□□□ -0.98
CCDC90B-204ENST00000525504 SLAIN2Q9P270 581 aa8.96□□□□□ -0.98
CCDC90B-204ENST00000525504 SEPT9Q9UHD8 586 aaPredicted RBP8.96□□□□□ -0.98
CCDC90B-204ENST00000525504 HFM1A2PYH4 1435 aa8.96□□□□□ -0.98
CCDC90B-204ENST00000525504 TYW1BQ6NUM6 668 aa8.95□□□□□ -0.98
CCDC90B-204ENST00000525504 C19orf44Q9H6X5 657 aa8.95□□□□□ -0.98
CCDC90B-204ENST00000525504 AMOTL2Q9Y2J4 779 aa8.94□□□□□ -0.98
CCDC90B-204ENST00000525504 POLR1AO95602 1720 aaPredicted RBP8.94□□□□□ -0.98
CCDC90B-204ENST00000525504 LOC100996750A0A140TA64 210 aa8.93□□□□□ -0.98
CCDC90B-204ENST00000525504 TRIM6-TRIM34B2RNG4 842 aa8.93□□□□□ -0.98
CCDC90B-204ENST00000525504 PPP4CP60510 307 aa8.93□□□□□ -0.98
CCDC90B-204ENST00000525504 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
CCDC90B-204ENST00000525504 KRTAP4-6Q9BYQ5 205 aa8.93□□□□□ -0.98
CCDC90B-204ENST00000525504 STK17AQ9UEE5 414 aa8.93□□□□□ -0.98
CCDC90B-204ENST00000525504 RPGRIP1LQ68CZ1 1315 aa8.93□□□□□ -0.98
CCDC90B-204ENST00000525504 NKTRP30414 1462 aaKnown RBP8.93□□□□□ -0.98
CCDC90B-204ENST00000525504 TMEM131LA2VDJ0 1609 aa8.92□□□□□ -0.98
CCDC90B-204ENST00000525504 IQGAP3Q86VI3 1631 aa8.92□□□□□ -0.98
CCDC90B-204ENST00000525504 MSH6P52701 1360 aa8.92□□□□□ -0.98
CCDC90B-204ENST00000525504 ACIN1Q9UKV3 1341 aaKnown RBP8.92□□□□□ -0.98
CCDC90B-204ENST00000525504 DGAT1O75907 488 aa8.92□□□□□ -0.98
CCDC90B-204ENST00000525504 PHF14O94880 888 aa8.92□□□□□ -0.98
CCDC90B-204ENST00000525504 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
CCDC90B-204ENST00000525504 MYT1Q01538 1121 aa8.91□□□□□ -0.98
CCDC90B-204ENST00000525504 ZNF326Q5BKZ1 582 aaKnown RBP8.91□□□□□ -0.98
CCDC90B-204ENST00000525504 MTRQ99707 1265 aa8.91□□□□□ -0.98
CCDC90B-204ENST00000525504 STRCP1A6NGW2 1772 aa8.91□□□□□ -0.98
CCDC90B-204ENST00000525504 PTPRUQ92729 1446 aa8.9□□□□□ -0.98
CCDC90B-204ENST00000525504 METP08581 1390 aa8.9□□□□□ -0.98
CCDC90B-204ENST00000525504 MAP3K9P80192 1104 aa8.9□□□□□ -0.98
CCDC90B-204ENST00000525504 MPHOSPH9Q99550 1183 aa8.9□□□□□ -0.98
CCDC90B-204ENST00000525504 RGS17Q9UGC6 210 aaPredicted RBP8.9□□□□□ -0.98
CCDC90B-204ENST00000525504 ATF3P18847 181 aa8.89□□□□□ -0.99
CCDC90B-204ENST00000525504 PKDCCQ504Y2 493 aa8.89□□□□□ -0.99
CCDC90B-204ENST00000525504 NWD1Q149M9 1564 aa8.89□□□□□ -0.99
CCDC90B-204ENST00000525504 CFAP65Q6ZU64 1925 aaKnown RBP8.89□□□□□ -0.99
CCDC90B-204ENST00000525504 E9PCH4 1651 aa8.88□□□□□ -0.99
CCDC90B-204ENST00000525504 POTECB2RU33 542 aa8.88□□□□□ -0.99
CCDC90B-204ENST00000525504 PDE4AP27815 886 aa8.88□□□□□ -0.99
CCDC90B-204ENST00000525504 GGCXP38435 758 aa8.88□□□□□ -0.99
CCDC90B-204ENST00000525504 HRCP23327 699 aa8.87□□□□□ -0.99
CCDC90B-204ENST00000525504 AMER1Q5JTC6 1135 aaPredicted RBP8.87□□□□□ -0.99
CCDC90B-204ENST00000525504 C6orf132Q5T0Z8 1188 aa8.87□□□□□ -0.99
CCDC90B-204ENST00000525504 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
CCDC90B-204ENST00000525504 TMUB1Q9BVT8 246 aa8.87□□□□□ -0.99
CCDC90B-204ENST00000525504 TRPM2O94759 1503 aa8.86□□□□□ -0.99
CCDC90B-204ENST00000525504 GCC2Q8IWJ2 1684 aa8.86□□□□□ -0.99
CCDC90B-204ENST00000525504 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
CCDC90B-204ENST00000525504 BRINP3Q76B58 766 aa8.86□□□□□ -0.99
CCDC90B-204ENST00000525504 DCCP43146 1447 aa8.85□□□□□ -0.99
CCDC90B-204ENST00000525504 DIP2AQ14689 1571 aa8.85□□□□□ -0.99
CCDC90B-204ENST00000525504 SETBP1Q9Y6X0 1596 aa8.85□□□□□ -0.99
CCDC90B-204ENST00000525504 JCADQ9P266 1359 aa8.85□□□□□ -0.99
CCDC90B-204ENST00000525504 PRR20EP86478 221 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 PRR20CP86479 221 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 PRR20DP86480 221 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 PRR20BP86481 221 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 PRR20AP86496 221 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 SPATA31E1Q6ZUB1 1445 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 PRAG1Q86YV5 1406 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 EPAS1Q99814 870 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 SETD5Q9C0A6 1442 aa8.84□□□□□ -0.99
CCDC90B-204ENST00000525504 ADGRF5Q8IZF2 1346 aa8.83□□□□□ -1
CCDC90B-204ENST00000525504 MED1Q15648 1581 aaPredicted RBP8.83□□□□□ -1
CCDC90B-204ENST00000525504 SIRT1Q96EB6 747 aa8.83□□□□□ -1
CCDC90B-204ENST00000525504 ANKRD30BQ9BXX2 1392 aa8.83□□□□□ -1
CCDC90B-204ENST00000525504 SPATA31A6Q5VVP1 1343 aa8.82□□□□□ -1
CCDC90B-204ENST00000525504 NEXMIFQ5QGS0 1516 aa8.82□□□□□ -1
CCDC90B-204ENST00000525504 RGL3Q3MIN7 710 aa8.82□□□□□ -1
CCDC90B-204ENST00000525504 POTEAQ6S8J7 498 aa8.82□□□□□ -1
CCDC90B-204ENST00000525504 ZNF516Q92618 1163 aa8.82□□□□□ -1
CCDC90B-204ENST00000525504 ROBO2Q9HCK4 1378 aa8.82□□□□□ -1
CCDC90B-204ENST00000525504 CCDC144AA2RUR9 1427 aa8.81□□□□□ -1
CCDC90B-204ENST00000525504 PACS2Q86VP3 889 aa8.81□□□□□ -1
CCDC90B-204ENST00000525504 HS6ST3Q8IZP7 471 aa8.81□□□□□ -1
CCDC90B-204ENST00000525504 C14orf93Q9H972 538 aaKnown RBP8.81□□□□□ -1
CCDC90B-204ENST00000525504 RTN4Q9NQC3 1192 aaKnown RBP8.81□□□□□ -1
CCDC90B-204ENST00000525504 RYDENQ9NUL5 291 aaKnown RBP8.81□□□□□ -1
CCDC90B-204ENST00000525504 ABCC11Q96J66 1382 aa8.81□□□□□ -1
CCDC90B-204ENST00000525504 MST1RQ04912 1400 aa8.8□□□□□ -1
CCDC90B-204ENST00000525504 PTCH1Q13635 1447 aa8.8□□□□□ -1
CCDC90B-204ENST00000525504 ADGRL3Q9HAR2 1447 aa8.8□□□□□ -1
CCDC90B-204ENST00000525504 WIPF1O43516 503 aa8.8□□□□□ -1
CCDC90B-204ENST00000525504 INSM1Q01101 510 aaPredicted RBP8.8□□□□□ -1
CCDC90B-204ENST00000525504 LRRC59Q96AG4 307 aaKnown RBP8.8□□□□□ -1
CCDC90B-204ENST00000525504 XIRP1Q702N8 1843 aaKnown RBP8.8□□□□□ -1
CCDC90B-204ENST00000525504 CLTCL1P53675 1640 aa8.8□□□□□ -1
CCDC90B-204ENST00000525504 LRPPRCP42704 1394 aaKnown RBP8.79□□□□□ -1
CCDC90B-204ENST00000525504 SLC24A1O60721 1099 aa8.79□□□□□ -1
CCDC90B-204ENST00000525504 EMILIN3Q9NT22 766 aa8.79□□□□□ -1
CCDC90B-204ENST00000525504 CHD2O14647 1828 aaKnown RBP8.79□□□□□ -1
CCDC90B-204ENST00000525504 NRXN3Q9Y4C0 1643 aa8.79□□□□□ -1
CCDC90B-204ENST00000525504 SOS2Q07890 1332 aaPredicted RBP8.79□□□□□ -1
CCDC90B-204ENST00000525504 RAB3GAP2Q9H2M9 1393 aa8.78□□□□□ -1
CCDC90B-204ENST00000525504 WFS1O76024 890 aa8.78□□□□□ -1
CCDC90B-204ENST00000525504 DDX27Q96GQ7 796 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms