RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 RGPD5Q99666 1765 aa16.58■□□□□ 0.24
CDC27-202ENST00000525495 COL5A2P05997 1499 aaPredicted RBP16.57■□□□□ 0.24
CDC27-202ENST00000525495 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
CDC27-202ENST00000525495 CDCA8Q53HL2 280 aa16.57■□□□□ 0.24
CDC27-202ENST00000525495 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
CDC27-202ENST00000525495 KCNH5Q8NCM2 988 aa16.57■□□□□ 0.24
CDC27-202ENST00000525495 AATKQ6ZMQ8 1374 aa16.57■□□□□ 0.24
CDC27-202ENST00000525495 OVOS2A0A0J9YW53 1432 aa16.57■□□□□ 0.24
CDC27-202ENST00000525495 OVOS2Q6IE36 1432 aa16.57■□□□□ 0.24
CDC27-202ENST00000525495 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
CDC27-202ENST00000525495 SPATA31A1Q5TZJ5 1347 aa16.56■□□□□ 0.24
CDC27-202ENST00000525495 THSD7AQ9UPZ6 1657 aa16.55■□□□□ 0.24
CDC27-202ENST00000525495 EVA1CP58658 441 aa16.55■□□□□ 0.24
CDC27-202ENST00000525495 LARP1Q6PKG0 1096 aaKnown RBP16.55■□□□□ 0.24
CDC27-202ENST00000525495 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
CDC27-202ENST00000525495 LTN1O94822 1766 aa16.55■□□□□ 0.24
CDC27-202ENST00000525495 USP35Q9P2H5 1018 aa16.54■□□□□ 0.24
CDC27-202ENST00000525495 A0A0G2JS52 829 aa16.52■□□□□ 0.23
CDC27-202ENST00000525495 MYT1Q01538 1121 aa16.52■□□□□ 0.23
CDC27-202ENST00000525495 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
CDC27-202ENST00000525495 CARD14Q9BXL6 1004 aa16.51■□□□□ 0.23
CDC27-202ENST00000525495 C11orf95C9JLR9 678 aaPredicted RBP16.5■□□□□ 0.23
CDC27-202ENST00000525495 POLR3GLQ9BT43 218 aa16.5■□□□□ 0.23
CDC27-202ENST00000525495 ABCC6O95255 1503 aa16.5■□□□□ 0.23
CDC27-202ENST00000525495 CRB1P82279 1406 aa16.5■□□□□ 0.23
CDC27-202ENST00000525495 FYB1O15117 783 aa16.49■□□□□ 0.23
CDC27-202ENST00000525495 KRT27Q7Z3Y8 459 aa16.49■□□□□ 0.23
CDC27-202ENST00000525495 COG3Q96JB2 828 aa16.48■□□□□ 0.23
CDC27-202ENST00000525495 GGNBP2Q9H3C7 697 aa16.48■□□□□ 0.23
CDC27-202ENST00000525495 NSD3Q9BZ95 1437 aa16.48■□□□□ 0.23
CDC27-202ENST00000525495 WDR17Q8IZU2 1322 aa16.48■□□□□ 0.23
CDC27-202ENST00000525495 FBLN1P23142 703 aa16.48■□□□□ 0.23
CDC27-202ENST00000525495 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
CDC27-202ENST00000525495 TCP11L2Q8N4U5 519 aa16.48■□□□□ 0.23
CDC27-202ENST00000525495 WNK3Q9BYP7 1800 aa16.47■□□□□ 0.23
CDC27-202ENST00000525495 FAM182BQ5T319 152 aa16.46■□□□□ 0.23
CDC27-202ENST00000525495 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
CDC27-202ENST00000525495 PARP4Q9UKK3 1724 aaKnown RBP16.46■□□□□ 0.23
CDC27-202ENST00000525495 THRAP3Q9Y2W1 955 aaKnown RBP16.45■□□□□ 0.22
CDC27-202ENST00000525495 ERBB3P21860 1342 aa16.44■□□□□ 0.22
CDC27-202ENST00000525495 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
CDC27-202ENST00000525495 CSB-PGBD3P0DP91 1061 aa16.43■□□□□ 0.22
CDC27-202ENST00000525495 LRRC37A3O60309 1634 aa16.43■□□□□ 0.22
CDC27-202ENST00000525495 NPM3O75607 178 aaKnown RBP16.42■□□□□ 0.22
CDC27-202ENST00000525495 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
CDC27-202ENST00000525495 RRS1Q15050 365 aaKnown RBP16.42■□□□□ 0.22
CDC27-202ENST00000525495 IP6K1Q92551 441 aa16.42■□□□□ 0.22
CDC27-202ENST00000525495 CARD10Q9BWT7 1032 aa16.42■□□□□ 0.22
CDC27-202ENST00000525495 KIF7Q2M1P5 1343 aa16.41■□□□□ 0.22
CDC27-202ENST00000525495 PANK3Q9H999 370 aa16.41■□□□□ 0.22
CDC27-202ENST00000525495 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
CDC27-202ENST00000525495 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
CDC27-202ENST00000525495 ANKRD24Q8TF21 1146 aa16.4■□□□□ 0.22
CDC27-202ENST00000525495 DISP2A7MBM2 1401 aa16.4■□□□□ 0.22
CDC27-202ENST00000525495 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.22
CDC27-202ENST00000525495 RGPD2P0DJD1 1756 aa16.39■□□□□ 0.21
CDC27-202ENST00000525495 HOXC9P31274 260 aa16.39■□□□□ 0.21
CDC27-202ENST00000525495 CGNL1Q0VF96 1302 aa16.39■□□□□ 0.21
CDC27-202ENST00000525495 AMPHP49418 695 aa16.38■□□□□ 0.21
CDC27-202ENST00000525495 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
CDC27-202ENST00000525495 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
CDC27-202ENST00000525495 CCDC7Q96M83 1385 aa16.38■□□□□ 0.21
CDC27-202ENST00000525495 RGPD1P0DJD0 1748 aa16.38■□□□□ 0.21
CDC27-202ENST00000525495 TNS1Q9HBL0 1735 aaKnown RBP16.38■□□□□ 0.21
CDC27-202ENST00000525495 PDE3BQ13370 1112 aa16.37■□□□□ 0.21
CDC27-202ENST00000525495 LTV1Q96GA3 475 aaPredicted RBP16.37■□□□□ 0.21
CDC27-202ENST00000525495 RTL1A6NKG5 1358 aa16.37■□□□□ 0.21
CDC27-202ENST00000525495 DEFB132Q7Z7B7 95 aa16.36■□□□□ 0.21
CDC27-202ENST00000525495 MAP2P11137 1827 aaKnown RBP16.36■□□□□ 0.21
CDC27-202ENST00000525495 DDB1Q16531 1140 aa16.35■□□□□ 0.21
CDC27-202ENST00000525495 FAM196AQ6ZSG2 479 aa16.35■□□□□ 0.21
CDC27-202ENST00000525495 EMILIN1Q9Y6C2 1016 aa16.35■□□□□ 0.21
CDC27-202ENST00000525495 HSP90AB2PQ58FF8 381 aa16.34■□□□□ 0.21
CDC27-202ENST00000525495 CDCA7Q9BWT1 371 aaPredicted RBP16.34■□□□□ 0.21
CDC27-202ENST00000525495 SBF2Q86WG5 1849 aa16.33■□□□□ 0.2
CDC27-202ENST00000525495 TRIM37O94972 964 aa16.33■□□□□ 0.2
CDC27-202ENST00000525495 SF3B2Q13435 895 aaKnown RBP16.33■□□□□ 0.2
CDC27-202ENST00000525495 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
CDC27-202ENST00000525495 MARCH10Q8NA82 808 aaPredicted RBP16.32■□□□□ 0.2
CDC27-202ENST00000525495 FLT4P35916 1363 aa16.32■□□□□ 0.2
CDC27-202ENST00000525495 OVOS2A0A0G2JMS6 1433 aa16.32■□□□□ 0.2
CDC27-202ENST00000525495 TNS2Q63HR2 1409 aa16.32■□□□□ 0.2
CDC27-202ENST00000525495 INSRP06213 1382 aa16.31■□□□□ 0.2
CDC27-202ENST00000525495 KIF24Q5T7B8 1368 aa16.31■□□□□ 0.2
CDC27-202ENST00000525495 IL2RBP14784 551 aa16.3■□□□□ 0.2
CDC27-202ENST00000525495 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
CDC27-202ENST00000525495 NSD2O96028 1365 aa16.3■□□□□ 0.2
CDC27-202ENST00000525495 EXOC5O00471 708 aa16.29■□□□□ 0.2
CDC27-202ENST00000525495 PPM1GO15355 546 aaPredicted RBP16.29■□□□□ 0.2
CDC27-202ENST00000525495 NBPF6Q5VWK0 638 aa16.29■□□□□ 0.2
CDC27-202ENST00000525495 NBPF4Q96M43 638 aa16.29■□□□□ 0.2
CDC27-202ENST00000525495 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
CDC27-202ENST00000525495 BAG6P46379 1132 aa16.29■□□□□ 0.2
CDC27-202ENST00000525495 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
CDC27-202ENST00000525495 KNSTRNQ9Y448 316 aa16.29■□□□□ 0.2
CDC27-202ENST00000525495 SMG6Q86US8 1419 aaKnown RBP16.28■□□□□ 0.2
CDC27-202ENST00000525495 PER1O15534 1290 aaPredicted RBP16.28■□□□□ 0.2
CDC27-202ENST00000525495 AMER1Q5JTC6 1135 aaPredicted RBP16.28■□□□□ 0.2
CDC27-202ENST00000525495 USHBP1Q8N6Y0 703 aa16.28■□□□□ 0.2
CDC27-202ENST00000525495 MEGF6O75095 1541 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms