RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 SKIP12755 728 aa8.55□□□□□ -1.04
USP47-206ENST00000525367 SLC19A1P41440 591 aa8.55□□□□□ -1.04
USP47-206ENST00000525367 PKDCCQ504Y2 493 aa8.55□□□□□ -1.04
USP47-206ENST00000525367 CEP126Q9P2H0 1117 aa8.55□□□□□ -1.04
USP47-206ENST00000525367 RNF223E7ERA6 249 aa8.54□□□□□ -1.04
USP47-206ENST00000525367 TSGA10IPQ3SY00 556 aa8.54□□□□□ -1.04
USP47-206ENST00000525367 ZBTB33Q86T24 672 aa8.54□□□□□ -1.04
USP47-206ENST00000525367 ZNF511Q8NB15 262 aa8.54□□□□□ -1.04
USP47-206ENST00000525367 USP17L3A6NCW0 530 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 USP17L4A6NCW7 530 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 USP17L5A8MUK1 530 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 ERFEQ4G0M1 354 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 USP17L2Q6R6M4 530 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 TREML4Q6UXN2 200 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 USP17L1Q7RTZ2 530 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 TRAIPQ9BWF2 469 aa8.53□□□□□ -1.04
USP47-206ENST00000525367 SH3BP2P78314 561 aa8.52□□□□□ -1.05
USP47-206ENST00000525367 AGERQ15109 404 aa8.52□□□□□ -1.05
USP47-206ENST00000525367 KANK4Q5T7N3 995 aaPredicted RBP8.52□□□□□ -1.05
USP47-206ENST00000525367 PHTF2Q8N3S3 785 aa8.52□□□□□ -1.05
USP47-206ENST00000525367 ZNF598Q86UK7 904 aaKnown RBP8.51□□□□□ -1.05
USP47-206ENST00000525367 DZIP3Q86Y13 1208 aaKnown RBP8.51□□□□□ -1.05
USP47-206ENST00000525367 RNF135Q8IUD6 432 aa8.51□□□□□ -1.05
USP47-206ENST00000525367 ACIN1Q9UKV3 1341 aaKnown RBP8.51□□□□□ -1.05
USP47-206ENST00000525367 SKOR1P84550 965 aa8.5□□□□□ -1.05
USP47-206ENST00000525367 NCOA4Q13772 614 aa8.5□□□□□ -1.05
USP47-206ENST00000525367 SLFNL1Q499Z3 407 aa8.5□□□□□ -1.05
USP47-206ENST00000525367 PLPP7Q8NBV4 271 aa8.5□□□□□ -1.05
USP47-206ENST00000525367 CCDC85AQ96PX6 553 aaPredicted RBP8.5□□□□□ -1.05
USP47-206ENST00000525367 GIGYF1O75420 1035 aaPredicted RBP8.49□□□□□ -1.05
USP47-206ENST00000525367 TRIM32Q13049 653 aa8.49□□□□□ -1.05
USP47-206ENST00000525367 BPHLQ86WA6 291 aaPredicted RBP8.49□□□□□ -1.05
USP47-206ENST00000525367 NFATC2IPQ8NCF5 419 aa8.49□□□□□ -1.05
USP47-206ENST00000525367 ZMIZ1Q9ULJ6 1067 aa8.49□□□□□ -1.05
USP47-206ENST00000525367 GDF9O60383 454 aa8.48□□□□□ -1.05
USP47-206ENST00000525367 ATG7O95352 703 aa8.48□□□□□ -1.05
USP47-206ENST00000525367 NPM2Q86SE8 214 aaKnown RBP8.48□□□□□ -1.05
USP47-206ENST00000525367 AEBP1Q8IUX7 1158 aa8.48□□□□□ -1.05
USP47-206ENST00000525367 C1QTNF2Q9BXJ5 285 aa8.48□□□□□ -1.05
USP47-206ENST00000525367 VRTNQ9H8Y1 702 aa8.48□□□□□ -1.05
USP47-206ENST00000525367 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
USP47-206ENST00000525367 CSB-PGBD3P0DP91 1061 aa8.47□□□□□ -1.05
USP47-206ENST00000525367 CRTC2Q53ET0 693 aaPredicted RBP8.47□□□□□ -1.05
USP47-206ENST00000525367 PLEKHM2Q8IWE5 1019 aa8.47□□□□□ -1.05
USP47-206ENST00000525367 ANKLE1Q8NAG6 615 aa8.47□□□□□ -1.05
USP47-206ENST00000525367 STK32AQ8WU08 396 aa8.47□□□□□ -1.05
USP47-206ENST00000525367 CDCA7Q9BWT1 371 aaPredicted RBP8.47□□□□□ -1.05
USP47-206ENST00000525367 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
USP47-206ENST00000525367 SLC10A4Q96EP9 437 aa8.46□□□□□ -1.06
USP47-206ENST00000525367 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
USP47-206ENST00000525367 CHIC2Q9UKJ5 165 aa8.46□□□□□ -1.06
USP47-206ENST00000525367 FAM187AA6NFU0 413 aa8.45□□□□□ -1.06
USP47-206ENST00000525367 RAB15P59190 212 aa8.45□□□□□ -1.06
USP47-206ENST00000525367 OXLD1Q5BKU9 147 aa8.45□□□□□ -1.06
USP47-206ENST00000525367 AAASQ9NRG9 546 aa8.45□□□□□ -1.06
USP47-206ENST00000525367 USP17L15C9J2P7 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L10C9JJH3 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L13C9JLJ4 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L12C9JPN9 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L11C9JVI0 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L21D6R901 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L18D6R9N7 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L22D6RA61 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L17D6RBQ6 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L19D6RCP7 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L20D6RJB6 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 ZBTB24O43167 697 aaPredicted RBP8.44□□□□□ -1.06
USP47-206ENST00000525367 MCCD1P59942 119 aaPredicted RBP8.44□□□□□ -1.06
USP47-206ENST00000525367 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 TMEM164Q5U3C3 297 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 NOVA2Q9UNW9 492 aaKnown RBP8.44□□□□□ -1.06
USP47-206ENST00000525367 DOLKQ9UPQ8 538 aa8.44□□□□□ -1.06
USP47-206ENST00000525367 CLDN10P78369 228 aa8.43□□□□□ -1.06
USP47-206ENST00000525367 KIAA1024Q9UPX6 916 aa8.43□□□□□ -1.06
USP47-206ENST00000525367 USTQ9Y2C2 406 aa8.43□□□□□ -1.06
USP47-206ENST00000525367 ST8SIA5O15466 376 aa8.42□□□□□ -1.06
USP47-206ENST00000525367 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
USP47-206ENST00000525367 ZNF594Q96JF6 807 aaPredicted RBP8.42□□□□□ -1.06
USP47-206ENST00000525367 ZBTB7CA1YPR0 619 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 ESPNB1AK53 854 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 TNFRSF10AO00220 468 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 RASA1P20936 1047 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 PTK7Q13308 1070 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 EML3Q32P44 896 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 ZNF592Q92610 1267 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 SLAIN2Q9P270 581 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 PCDHB11Q9Y5F2 797 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 TLL2Q9Y6L7 1015 aa8.41□□□□□ -1.06
USP47-206ENST00000525367 FAM196BA6NMK8 535 aa8.4□□□□□ -1.06
USP47-206ENST00000525367 CRIPAKQ8N1N5 446 aa8.4□□□□□ -1.06
USP47-206ENST00000525367 OGFOD1Q8N543 542 aa8.4□□□□□ -1.06
USP47-206ENST00000525367 KCTD15Q96SI1 283 aaPredicted RBP8.4□□□□□ -1.06
USP47-206ENST00000525367 SCTRP47872 440 aa8.39□□□□□ -1.07
USP47-206ENST00000525367 WNT7BP56706 349 aa8.39□□□□□ -1.07
USP47-206ENST00000525367 ELOAQ14241 798 aaKnown RBP8.39□□□□□ -1.07
USP47-206ENST00000525367 NBPF20Q3BBV1 942 aa8.39□□□□□ -1.07
USP47-206ENST00000525367 MAP7D1Q3KQU3 841 aa8.39□□□□□ -1.07
USP47-206ENST00000525367 INTS6LQ5JSJ4 861 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms