RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 SHPRHQ149N8 1683 aa17.68■□□□□ 0.42
SWAP70-203ENST00000524817 RGPD5Q99666 1765 aa17.68■□□□□ 0.42
SWAP70-203ENST00000524817 A0A0G2JS52 829 aa17.68■□□□□ 0.42
SWAP70-203ENST00000524817 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
SWAP70-203ENST00000524817 MYT1Q01538 1121 aa17.68■□□□□ 0.42
SWAP70-203ENST00000524817 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
SWAP70-203ENST00000524817 NFAT5O94916 1531 aa17.68■□□□□ 0.42
SWAP70-203ENST00000524817 TOM1L2Q6ZVM7 507 aa17.67■□□□□ 0.42
SWAP70-203ENST00000524817 ABCA3Q99758 1704 aa17.67■□□□□ 0.42
SWAP70-203ENST00000524817 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
SWAP70-203ENST00000524817 HMOX1P09601 288 aa17.66■□□□□ 0.42
SWAP70-203ENST00000524817 IP6K1Q92551 441 aa17.66■□□□□ 0.42
SWAP70-203ENST00000524817 RGS17Q9UGC6 210 aaPredicted RBP17.66■□□□□ 0.42
SWAP70-203ENST00000524817 LTN1O94822 1766 aa17.66■□□□□ 0.42
SWAP70-203ENST00000524817 PARD3Q8TEW0 1356 aa17.66■□□□□ 0.42
SWAP70-203ENST00000524817 NSD2O96028 1365 aa17.65■□□□□ 0.42
SWAP70-203ENST00000524817 CRYBG1Q9Y4K1 1723 aa17.65■□□□□ 0.42
SWAP70-203ENST00000524817 SLIT3O75094 1523 aa17.65■□□□□ 0.42
SWAP70-203ENST00000524817 EIF4A2Q14240 407 aaKnown RBP17.64■□□□□ 0.41
SWAP70-203ENST00000524817 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
SWAP70-203ENST00000524817 NBPF6Q5VWK0 638 aa17.64■□□□□ 0.41
SWAP70-203ENST00000524817 NBPF4Q96M43 638 aa17.64■□□□□ 0.41
SWAP70-203ENST00000524817 COL22A1Q8NFW1 1626 aaPredicted RBP17.64■□□□□ 0.41
SWAP70-203ENST00000524817 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
SWAP70-203ENST00000524817 RALBP1Q15311 655 aa17.64■□□□□ 0.41
SWAP70-203ENST00000524817 AEBP1Q8IUX7 1158 aa17.63■□□□□ 0.41
SWAP70-203ENST00000524817 POTEAQ6S8J7 498 aa17.63■□□□□ 0.41
SWAP70-203ENST00000524817 MRS2Q9HD23 443 aa17.63■□□□□ 0.41
SWAP70-203ENST00000524817 MYBBP1AQ9BQG0 1328 aaKnown RBP17.62■□□□□ 0.41
SWAP70-203ENST00000524817 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
SWAP70-203ENST00000524817 UNC5CLQ8IV45 518 aa17.62■□□□□ 0.41
SWAP70-203ENST00000524817 NPC1L1Q9UHC9 1359 aa17.61■□□□□ 0.41
SWAP70-203ENST00000524817 ERBB3P21860 1342 aa17.61■□□□□ 0.41
SWAP70-203ENST00000524817 FAM182BQ5T319 152 aa17.61■□□□□ 0.41
SWAP70-203ENST00000524817 FLT4P35916 1363 aa17.61■□□□□ 0.41
SWAP70-203ENST00000524817 BCL9LQ86UU0 1499 aa17.61■□□□□ 0.41
SWAP70-203ENST00000524817 FAM9BQ8IZU0 186 aa17.61■□□□□ 0.41
SWAP70-203ENST00000524817 EYA1Q99502 592 aa17.61■□□□□ 0.41
SWAP70-203ENST00000524817 ANKRD26Q9UPS8 1709 aa17.6■□□□□ 0.41
SWAP70-203ENST00000524817 CPDO75976 1380 aa17.6■□□□□ 0.41
SWAP70-203ENST00000524817 AATKQ6ZMQ8 1374 aa17.6■□□□□ 0.41
SWAP70-203ENST00000524817 FNBP4Q8N3X1 1017 aaPredicted RBP17.6■□□□□ 0.41
SWAP70-203ENST00000524817 DIAPH1O60610 1272 aaKnown RBP17.59■□□□□ 0.41
SWAP70-203ENST00000524817 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
SWAP70-203ENST00000524817 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
SWAP70-203ENST00000524817 SULT6B1Q6IMI4 303 aa17.58■□□□□ 0.41
SWAP70-203ENST00000524817 COL5A2P05997 1499 aaPredicted RBP17.58■□□□□ 0.4
SWAP70-203ENST00000524817 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.4
SWAP70-203ENST00000524817 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
SWAP70-203ENST00000524817 CFAP53Q96M91 514 aa17.57■□□□□ 0.4
SWAP70-203ENST00000524817 IL13P35225 146 aa17.56■□□□□ 0.4
SWAP70-203ENST00000524817 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
SWAP70-203ENST00000524817 WDR17Q8IZU2 1322 aa17.56■□□□□ 0.4
SWAP70-203ENST00000524817 SLIT2O94813 1529 aa17.56■□□□□ 0.4
SWAP70-203ENST00000524817 PLCH1Q4KWH8 1693 aa17.55■□□□□ 0.4
SWAP70-203ENST00000524817 INSRP06213 1382 aa17.55■□□□□ 0.4
SWAP70-203ENST00000524817 COL18A1P39060 1754 aa17.55■□□□□ 0.4
SWAP70-203ENST00000524817 GJD4Q96KN9 370 aaPredicted RBP17.54■□□□□ 0.4
SWAP70-203ENST00000524817 KAT6BQ8WYB5 2073 aa17.54■□□□□ 0.4
SWAP70-203ENST00000524817 TRPC5Q9UL62 973 aaPredicted RBP17.54■□□□□ 0.4
SWAP70-203ENST00000524817 ADAMTS8Q9UP79 889 aa17.53■□□□□ 0.4
SWAP70-203ENST00000524817 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
SWAP70-203ENST00000524817 COL14A1Q05707 1796 aaKnown RBP17.52■□□□□ 0.4
SWAP70-203ENST00000524817 USP54Q70EL1 1684 aa17.52■□□□□ 0.4
SWAP70-203ENST00000524817 LMO7Q8WWI1 1683 aa17.52■□□□□ 0.39
SWAP70-203ENST00000524817 DDX54Q8TDD1 881 aaKnown RBP17.52■□□□□ 0.39
SWAP70-203ENST00000524817 SPATA31A1Q5TZJ5 1347 aa17.51■□□□□ 0.39
SWAP70-203ENST00000524817 ZNF772Q68DY9 489 aaPredicted RBP17.51■□□□□ 0.39
SWAP70-203ENST00000524817 SPATA31A5Q5VU36 1347 aa17.5■□□□□ 0.39
SWAP70-203ENST00000524817 SPATA31A7Q8IWB4 1347 aa17.5■□□□□ 0.39
SWAP70-203ENST00000524817 VPS72Q15906 364 aa17.5■□□□□ 0.39
SWAP70-203ENST00000524817 TCP11L2Q8N4U5 519 aa17.5■□□□□ 0.39
SWAP70-203ENST00000524817 SMG6Q86US8 1419 aaKnown RBP17.5■□□□□ 0.39
SWAP70-203ENST00000524817 WDR43Q15061 677 aaKnown RBP eCLIP17.5■□□□□ 0.39
SWAP70-203ENST00000524817 RRP7AQ9Y3A4 280 aaKnown RBP17.5■□□□□ 0.39
SWAP70-203ENST00000524817 RXRBP28702 533 aa17.5■□□□□ 0.39
SWAP70-203ENST00000524817 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
SWAP70-203ENST00000524817 PRKAR2BP31323 418 aa17.49■□□□□ 0.39
SWAP70-203ENST00000524817 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
SWAP70-203ENST00000524817 BLMP54132 1417 aaPredicted RBP17.49■□□□□ 0.39
SWAP70-203ENST00000524817 NUDCQ9Y266 331 aa17.49■□□□□ 0.39
SWAP70-203ENST00000524817 CRB1P82279 1406 aa17.49■□□□□ 0.39
SWAP70-203ENST00000524817 RTL1A6NKG5 1358 aa17.49■□□□□ 0.39
SWAP70-203ENST00000524817 CARD10Q9BWT7 1032 aa17.48■□□□□ 0.39
SWAP70-203ENST00000524817 RAPGEF4Q8WZA2 1011 aa17.48■□□□□ 0.39
SWAP70-203ENST00000524817 SEPT12Q8IYM1 358 aa17.47■□□□□ 0.39
SWAP70-203ENST00000524817 COL3A1P02461 1466 aaPredicted RBP17.47■□□□□ 0.39
SWAP70-203ENST00000524817 IGSF1Q8N6C5 1336 aa17.46■□□□□ 0.39
SWAP70-203ENST00000524817 IL2RBP14784 551 aa17.45■□□□□ 0.38
SWAP70-203ENST00000524817 PNISRQ8TF01 805 aaKnown RBP17.45■□□□□ 0.38
SWAP70-203ENST00000524817 RBM6P78332 1123 aaKnown RBP17.45■□□□□ 0.38
SWAP70-203ENST00000524817 YTHDC1Q96MU7 727 aaKnown RBP17.45■□□□□ 0.38
SWAP70-203ENST00000524817 NRAPQ86VF7 1730 aa17.45■□□□□ 0.38
SWAP70-203ENST00000524817 MEGF6O75095 1541 aa17.44■□□□□ 0.38
SWAP70-203ENST00000524817 ATRNO75882 1429 aa17.43■□□□□ 0.38
SWAP70-203ENST00000524817 SRCAPQ6ZRS2 3230 aa17.43■□□□□ 0.38
SWAP70-203ENST00000524817 GLI3P10071 1580 aa17.43■□□□□ 0.38
SWAP70-203ENST00000524817 TATP17735 454 aaPredicted RBP17.43■□□□□ 0.38
SWAP70-203ENST00000524817 DDB1Q16531 1140 aa17.43■□□□□ 0.38
SWAP70-203ENST00000524817 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms