RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 USP35Q9P2H5 1018 aa15.69■□□□□ 0.1
TRAPPC4-204ENST00000524797 CRB1P82279 1406 aa15.69■□□□□ 0.1
TRAPPC4-204ENST00000524797 TNS1Q9HBL0 1735 aaKnown RBP15.69■□□□□ 0.1
TRAPPC4-204ENST00000524797 SOX12O15370 315 aa15.68■□□□□ 0.1
TRAPPC4-204ENST00000524797 TMF1P82094 1093 aa15.68■□□□□ 0.1
TRAPPC4-204ENST00000524797 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
TRAPPC4-204ENST00000524797 CCER1Q8TC90 406 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC4-204ENST00000524797 THRAP3Q9Y2W1 955 aaKnown RBP15.67■□□□□ 0.1
TRAPPC4-204ENST00000524797 MYOM1P52179 1685 aa15.67■□□□□ 0.1
TRAPPC4-204ENST00000524797 AXIN2Q9Y2T1 843 aa15.66■□□□□ 0.1
TRAPPC4-204ENST00000524797 FAM182BQ5T319 152 aa15.66■□□□□ 0.1
TRAPPC4-204ENST00000524797 OVOS2A0A0J9YW53 1432 aa15.66■□□□□ 0.1
TRAPPC4-204ENST00000524797 OVOS2Q6IE36 1432 aa15.66■□□□□ 0.1
TRAPPC4-204ENST00000524797 LRRC37A3O60309 1634 aa15.65■□□□□ 0.1
TRAPPC4-204ENST00000524797 SF3B2Q13435 895 aaKnown RBP15.65■□□□□ 0.1
TRAPPC4-204ENST00000524797 ANKRD36BQ8N2N9 1353 aa15.65■□□□□ 0.1
TRAPPC4-204ENST00000524797 WDR17Q8IZU2 1322 aa15.65■□□□□ 0.1
TRAPPC4-204ENST00000524797 KIF20BQ96Q89 1820 aa15.64■□□□□ 0.1
TRAPPC4-204ENST00000524797 DEFB132Q7Z7B7 95 aa15.64■□□□□ 0.09
TRAPPC4-204ENST00000524797 TOM1L2Q6ZVM7 507 aa15.63■□□□□ 0.09
TRAPPC4-204ENST00000524797 EP400Q96L91 3159 aa15.63■□□□□ 0.09
TRAPPC4-204ENST00000524797 PEAK1Q9H792 1746 aa15.62■□□□□ 0.09
TRAPPC4-204ENST00000524797 CDCA8Q53HL2 280 aa15.62■□□□□ 0.09
TRAPPC4-204ENST00000524797 PDE3BQ13370 1112 aa15.61■□□□□ 0.09
TRAPPC4-204ENST00000524797 SBF2Q86WG5 1849 aa15.61■□□□□ 0.09
TRAPPC4-204ENST00000524797 FAM196AQ6ZSG2 479 aa15.6■□□□□ 0.09
TRAPPC4-204ENST00000524797 CSB-PGBD3P0DP91 1061 aa15.6■□□□□ 0.09
TRAPPC4-204ENST00000524797 BAG6P46379 1132 aa15.6■□□□□ 0.09
TRAPPC4-204ENST00000524797 CARD10Q9BWT7 1032 aa15.6■□□□□ 0.09
TRAPPC4-204ENST00000524797 FAM208AQ9UK61 1670 aaKnown RBP15.59■□□□□ 0.09
TRAPPC4-204ENST00000524797 DISP2A7MBM2 1401 aa15.59■□□□□ 0.09
TRAPPC4-204ENST00000524797 COG3Q96JB2 828 aa15.58■□□□□ 0.08
TRAPPC4-204ENST00000524797 CCDC7Q96M83 1385 aa15.58■□□□□ 0.08
TRAPPC4-204ENST00000524797 TRIM37O94972 964 aa15.56■□□□□ 0.08
TRAPPC4-204ENST00000524797 CDCA7Q9BWT1 371 aaPredicted RBP15.56■□□□□ 0.08
TRAPPC4-204ENST00000524797 RREB1Q92766 1687 aa15.56■□□□□ 0.08
TRAPPC4-204ENST00000524797 DDB1Q16531 1140 aa15.56■□□□□ 0.08
TRAPPC4-204ENST00000524797 ERBB3P21860 1342 aa15.56■□□□□ 0.08
TRAPPC4-204ENST00000524797 RGPD2P0DJD1 1756 aa15.55■□□□□ 0.08
TRAPPC4-204ENST00000524797 EN1Q05925 392 aaPredicted RBP15.55■□□□□ 0.08
TRAPPC4-204ENST00000524797 ANKRD24Q8TF21 1146 aa15.55■□□□□ 0.08
TRAPPC4-204ENST00000524797 OVOS2A0A0G2JMS6 1433 aa15.55■□□□□ 0.08
TRAPPC4-204ENST00000524797 FYB1O15117 783 aa15.55■□□□□ 0.08
TRAPPC4-204ENST00000524797 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
TRAPPC4-204ENST00000524797 IP6K1Q92551 441 aa15.55■□□□□ 0.08
TRAPPC4-204ENST00000524797 EIF4G2P78344 907 aaKnown RBP eCLIP15.54■□□□□ 0.08
TRAPPC4-204ENST00000524797 NSD3Q9BZ95 1437 aa15.53■□□□□ 0.08
TRAPPC4-204ENST00000524797 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
TRAPPC4-204ENST00000524797 GGNBP2Q9H3C7 697 aa15.53■□□□□ 0.08
TRAPPC4-204ENST00000524797 NLRP2Q9NX02 1062 aa15.53■□□□□ 0.08
TRAPPC4-204ENST00000524797 NUP188Q5SRE5 1749 aa15.53■□□□□ 0.08
TRAPPC4-204ENST00000524797 MAP3K19Q56UN5 1328 aa15.53■□□□□ 0.08
TRAPPC4-204ENST00000524797 C11orf95C9JLR9 678 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC4-204ENST00000524797 TNS2Q63HR2 1409 aa15.52■□□□□ 0.08
TRAPPC4-204ENST00000524797 RGPD3A6NKT7 1758 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC4-204ENST00000524797 RGPD4Q7Z3J3 1758 aa15.52■□□□□ 0.07
TRAPPC4-204ENST00000524797 ANKRD26Q9UPS8 1709 aa15.52■□□□□ 0.07
TRAPPC4-204ENST00000524797 FBLN1P23142 703 aa15.52■□□□□ 0.07
TRAPPC4-204ENST00000524797 MARCH10Q8NA82 808 aaPredicted RBP15.52■□□□□ 0.07
TRAPPC4-204ENST00000524797 APBA3O96018 575 aa15.51■□□□□ 0.07
TRAPPC4-204ENST00000524797 EZH2Q15910 746 aaKnown RBP15.51■□□□□ 0.07
TRAPPC4-204ENST00000524797 CAMKK2Q96RR4 588 aa15.51■□□□□ 0.07
TRAPPC4-204ENST00000524797 RTL1A6NKG5 1358 aa15.51■□□□□ 0.07
TRAPPC4-204ENST00000524797 HOXC9P31274 260 aa15.51■□□□□ 0.07
TRAPPC4-204ENST00000524797 BCL9O00512 1426 aa15.5■□□□□ 0.07
TRAPPC4-204ENST00000524797 PARD3Q8TEW0 1356 aa15.5■□□□□ 0.07
TRAPPC4-204ENST00000524797 EXOC5O00471 708 aa15.49■□□□□ 0.07
TRAPPC4-204ENST00000524797 AMPHP49418 695 aa15.49■□□□□ 0.07
TRAPPC4-204ENST00000524797 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC4-204ENST00000524797 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
TRAPPC4-204ENST00000524797 NHSQ6T4R5 1651 aa15.48■□□□□ 0.07
TRAPPC4-204ENST00000524797 IL2RBP14784 551 aa15.48■□□□□ 0.07
TRAPPC4-204ENST00000524797 RRS1Q15050 365 aaKnown RBP15.48■□□□□ 0.07
TRAPPC4-204ENST00000524797 MAP2P11137 1827 aaKnown RBP15.48■□□□□ 0.07
TRAPPC4-204ENST00000524797 SHANK3Q9BYB0 1731 aa15.47■□□□□ 0.07
TRAPPC4-204ENST00000524797 PSDA5PKW4 1024 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC4-204ENST00000524797 LRP5O75197 1615 aa15.46■□□□□ 0.06
TRAPPC4-204ENST00000524797 BCL11BQ9C0K0 894 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC4-204ENST00000524797 PTF1AQ7RTS3 328 aa15.45■□□□□ 0.06
TRAPPC4-204ENST00000524797 CGNL1Q0VF96 1302 aa15.44■□□□□ 0.06
TRAPPC4-204ENST00000524797 KIF24Q5T7B8 1368 aa15.44■□□□□ 0.06
TRAPPC4-204ENST00000524797 INSRP06213 1382 aa15.43■□□□□ 0.06
TRAPPC4-204ENST00000524797 FLT4P35916 1363 aa15.43■□□□□ 0.06
TRAPPC4-204ENST00000524797 KAT6BQ8WYB5 2073 aa15.43■□□□□ 0.06
TRAPPC4-204ENST00000524797 BTAF1O14981 1849 aa15.43■□□□□ 0.06
TRAPPC4-204ENST00000524797 SMG6Q86US8 1419 aaKnown RBP15.43■□□□□ 0.06
TRAPPC4-204ENST00000524797 MEGF6O75095 1541 aa15.42■□□□□ 0.06
TRAPPC4-204ENST00000524797 PLSCR1O15162 318 aa15.41■□□□□ 0.06
TRAPPC4-204ENST00000524797 R3HDM1Q15032 1099 aaKnown RBP15.41■□□□□ 0.06
TRAPPC4-204ENST00000524797 PANK3Q9H999 370 aa15.41■□□□□ 0.06
TRAPPC4-204ENST00000524797 HSP90AB2PQ58FF8 381 aa15.41■□□□□ 0.06
TRAPPC4-204ENST00000524797 NBPF6Q5VWK0 638 aa15.41■□□□□ 0.06
TRAPPC4-204ENST00000524797 NBPF4Q96M43 638 aa15.41■□□□□ 0.06
TRAPPC4-204ENST00000524797 EMILIN1Q9Y6C2 1016 aa15.41■□□□□ 0.06
TRAPPC4-204ENST00000524797 DOT1LQ8TEK3 1739 aa15.4■□□□□ 0.06
TRAPPC4-204ENST00000524797 KCNQ2O43526 872 aa15.39■□□□□ 0.05
TRAPPC4-204ENST00000524797 USHBP1Q8N6Y0 703 aa15.39■□□□□ 0.05
TRAPPC4-204ENST00000524797 ACSBG1Q96GR2 724 aa15.39■□□□□ 0.05
TRAPPC4-204ENST00000524797 NBPF14Q5TI25 921 aa15.38■□□□□ 0.05
TRAPPC4-204ENST00000524797 PKD1L3Q7Z443 1732 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms