RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PURBQ96QR8 312 aaKnown RBP6.82□□□□□ -1.32
CSDE1-208ENST00000524652 EMILIN1Q9Y6C2 1016 aa6.82□□□□□ -1.32
CSDE1-208ENST00000524652 UPP2O95045 317 aa6.81□□□□□ -1.32
CSDE1-208ENST00000524652 PTK2Q05397 1052 aa6.81□□□□□ -1.32
CSDE1-208ENST00000524652 ZBTB33Q86T24 672 aa6.81□□□□□ -1.32
CSDE1-208ENST00000524652 SLC16A10Q8TF71 515 aa6.81□□□□□ -1.32
CSDE1-208ENST00000524652 PCMTD1Q96MG8 357 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-208ENST00000524652 HMX1Q9NP08 348 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-208ENST00000524652 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
CSDE1-208ENST00000524652 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
CSDE1-208ENST00000524652 TMEM259Q4ZIN3 620 aa6.79□□□□□ -1.32
CSDE1-208ENST00000524652 EPS8L1Q8TE68 723 aa6.79□□□□□ -1.32
CSDE1-208ENST00000524652 KCTD15Q96SI1 283 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-208ENST00000524652 OCSTAMPQ9BR26 566 aa6.79□□□□□ -1.32
CSDE1-208ENST00000524652 BRPF1P55201 1214 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-208ENST00000524652 INSM1Q01101 510 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-208ENST00000524652 DHX9Q08211 1270 aaKnown RBP6.78□□□□□ -1.32
CSDE1-208ENST00000524652 NBPF20Q3BBV1 942 aa6.78□□□□□ -1.32
CSDE1-208ENST00000524652 PPP1R26Q5T8A7 1209 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-208ENST00000524652 ADAM32Q8TC27 787 aa6.78□□□□□ -1.32
CSDE1-208ENST00000524652 TSEN34Q9BSV6 310 aaKnown RBP6.78□□□□□ -1.32
CSDE1-208ENST00000524652 PGPEP1Q9NXJ5 209 aa6.78□□□□□ -1.32
CSDE1-208ENST00000524652 H3BM21 787 aa6.77□□□□□ -1.33
CSDE1-208ENST00000524652 BMP2P12643 396 aa6.77□□□□□ -1.33
CSDE1-208ENST00000524652 C6orf118Q5T5N4 469 aa6.77□□□□□ -1.33
CSDE1-208ENST00000524652 IL27Q8NEV9 243 aa6.77□□□□□ -1.33
CSDE1-208ENST00000524652 IRF7Q92985 503 aa6.77□□□□□ -1.33
CSDE1-208ENST00000524652 MAN1A2O60476 641 aa6.76□□□□□ -1.33
CSDE1-208ENST00000524652 Q6ZVU0 165 aa6.76□□□□□ -1.33
CSDE1-208ENST00000524652 TRIM34Q9BYJ4 488 aa6.76□□□□□ -1.33
CSDE1-208ENST00000524652 SOS2Q07890 1332 aaPredicted RBP6.76□□□□□ -1.33
CSDE1-208ENST00000524652 INTS6LQ5JSJ4 861 aaKnown RBP6.75□□□□□ -1.33
CSDE1-208ENST00000524652 SOBPA7XYQ1 873 aa6.74□□□□□ -1.33
CSDE1-208ENST00000524652 SOCS7O14512 581 aa6.74□□□□□ -1.33
CSDE1-208ENST00000524652 VSIG8P0DPA2 414 aa6.73□□□□□ -1.33
CSDE1-208ENST00000524652 VEGFBP49765 207 aa6.73□□□□□ -1.33
CSDE1-208ENST00000524652 GJD4Q96KN9 370 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-208ENST00000524652 STK17AQ9UEE5 414 aa6.73□□□□□ -1.33
CSDE1-208ENST00000524652 DNMT3LQ9UJW3 386 aa6.73□□□□□ -1.33
CSDE1-208ENST00000524652 SPINT1O43278 529 aa6.72□□□□□ -1.33
CSDE1-208ENST00000524652 CBLBQ13191 982 aa6.72□□□□□ -1.33
CSDE1-208ENST00000524652 DZIP3Q86Y13 1208 aaKnown RBP6.72□□□□□ -1.33
CSDE1-208ENST00000524652 SEPT12Q8IYM1 358 aa6.72□□□□□ -1.33
CSDE1-208ENST00000524652 TTLL8A6PVC2 850 aa6.71□□□□□ -1.34
CSDE1-208ENST00000524652 GMPRP36959 345 aa6.71□□□□□ -1.34
CSDE1-208ENST00000524652 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.71□□□□□ -1.34
CSDE1-208ENST00000524652 BANK1Q8NDB2 785 aa6.71□□□□□ -1.34
CSDE1-208ENST00000524652 TRIM52Q96A61 297 aa6.71□□□□□ -1.34
CSDE1-208ENST00000524652 ERBB4Q15303 1308 aa6.71□□□□□ -1.34
CSDE1-208ENST00000524652 ZBBXA8MT70 800 aa6.7□□□□□ -1.34
CSDE1-208ENST00000524652 ESPNB1AK53 854 aa6.7□□□□□ -1.34
CSDE1-208ENST00000524652 TPRNQ4KMQ1 711 aa6.7□□□□□ -1.34
CSDE1-208ENST00000524652 ZNF784Q8NCA9 323 aaPredicted RBP6.7□□□□□ -1.34
CSDE1-208ENST00000524652 ERVH48-1M5A8F1 160 aa6.68□□□□□ -1.34
CSDE1-208ENST00000524652 APBB1O00213 710 aa6.68□□□□□ -1.34
CSDE1-208ENST00000524652 PPFIA3O75145 1194 aa6.68□□□□□ -1.34
CSDE1-208ENST00000524652 FBXO45P0C2W1 286 aa6.68□□□□□ -1.34
CSDE1-208ENST00000524652 CCDC125Q86Z20 511 aa6.68□□□□□ -1.34
CSDE1-208ENST00000524652 ZNF592Q92610 1267 aa6.68□□□□□ -1.34
CSDE1-208ENST00000524652 TMPRSS4Q9NRS4 437 aa6.68□□□□□ -1.34
CSDE1-208ENST00000524652 LILRA1O75019 489 aa6.67□□□□□ -1.34
CSDE1-208ENST00000524652 ADH1AP07327 375 aa6.67□□□□□ -1.34
CSDE1-208ENST00000524652 RAB15P59190 212 aa6.67□□□□□ -1.34
CSDE1-208ENST00000524652 MTMR14Q8NCE2 650 aa6.67□□□□□ -1.34
CSDE1-208ENST00000524652 FAM181BA6NEQ2 426 aa6.66□□□□□ -1.34
CSDE1-208ENST00000524652 MCCD1P59942 119 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-208ENST00000524652 RELBQ01201 579 aa6.66□□□□□ -1.34
CSDE1-208ENST00000524652 PTSQ03393 145 aa6.66□□□□□ -1.34
CSDE1-208ENST00000524652 ZSCAN1Q8NBB4 408 aa6.66□□□□□ -1.34
CSDE1-208ENST00000524652 AGBL1Q96MI9 1066 aa6.66□□□□□ -1.34
CSDE1-208ENST00000524652 NDUFB9Q9Y6M9 179 aa6.66□□□□□ -1.34
CSDE1-208ENST00000524652 GPR37L1O60883 481 aa6.65□□□□□ -1.34
CSDE1-208ENST00000524652 NR1H3Q13133 447 aa6.65□□□□□ -1.34
CSDE1-208ENST00000524652 INSM2Q96T92 566 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-208ENST00000524652 ZNF330Q9Y3S2 320 aaPredicted RBP6.65□□□□□ -1.34
CSDE1-208ENST00000524652 PCDHB9Q9Y5E1 797 aa6.65□□□□□ -1.34
CSDE1-208ENST00000524652 FIGNL2A6NMB9 653 aa6.64□□□□□ -1.35
CSDE1-208ENST00000524652 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-208ENST00000524652 CTSOP43234 321 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-208ENST00000524652 RNF20Q5VTR2 975 aa6.64□□□□□ -1.35
CSDE1-208ENST00000524652 RNF217Q8TC41 542 aa6.64□□□□□ -1.35
CSDE1-208ENST00000524652 POLMQ9NP87 494 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-208ENST00000524652 GIGYF1O75420 1035 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-208ENST00000524652 ADD1P35611 737 aaKnown RBP6.63□□□□□ -1.35
CSDE1-208ENST00000524652 PTGIRP43119 386 aa6.63□□□□□ -1.35
CSDE1-208ENST00000524652 KDF1Q8NAX2 398 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-208ENST00000524652 ZNF395Q9H8N7 513 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-208ENST00000524652 SLC35F4A4IF30 521 aa6.62□□□□□ -1.35
CSDE1-208ENST00000524652 CCDC155Q8N6L0 562 aa6.62□□□□□ -1.35
CSDE1-208ENST00000524652 NANOS1Q8WY41 292 aaKnown RBP6.62□□□□□ -1.35
CSDE1-208ENST00000524652 CYLDQ9NQC7 956 aa6.62□□□□□ -1.35
CSDE1-208ENST00000524652 ERVK-9P63128 1117 aa6.61□□□□□ -1.35
CSDE1-208ENST00000524652 FOXD4L5Q5VV16 416 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-208ENST00000524652 SNRKQ9NRH2 765 aa6.61□□□□□ -1.35
CSDE1-208ENST00000524652 ATP5J2-PTCD1G3V325 749 aa6.6□□□□□ -1.35
CSDE1-208ENST00000524652 ITGA6P23229 1130 aa6.6□□□□□ -1.35
CSDE1-208ENST00000524652 CC2D2BQ6DHV5 1058 aa6.6□□□□□ -1.35
CSDE1-208ENST00000524652 SENP3-EIF4A1A0A087X0R7 540 aa6.59□□□□□ -1.35
CSDE1-208ENST00000524652 GPC1P35052 558 aa6.59□□□□□ -1.35
CSDE1-208ENST00000524652 RNF144AP50876 292 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms