RNA–Protein interactions for RNA: ENST00000524617.1

NPAS4-202, Transcript of neuronal PAS domain protein 4, humanhuman

TSL 3

Gene NPAS4, Length 326 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-202ENST00000524617 INSRP06213 1382 aa10.61□□□□□ -0.71
NPAS4-202ENST00000524617 AFF2P51816 1311 aa10.6□□□□□ -0.71
NPAS4-202ENST00000524617 RRS1Q15050 365 aaKnown RBP10.6□□□□□ -0.71
NPAS4-202ENST00000524617 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
NPAS4-202ENST00000524617 MEX3CQ5U5Q3 659 aaKnown RBP10.6□□□□□ -0.71
NPAS4-202ENST00000524617 IP6K1Q92551 441 aa10.6□□□□□ -0.71
NPAS4-202ENST00000524617 POLKQ9UBT6 870 aa10.6□□□□□ -0.71
NPAS4-202ENST00000524617 ERBB3P21860 1342 aa10.59□□□□□ -0.71
NPAS4-202ENST00000524617 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
NPAS4-202ENST00000524617 FBLN1P23142 703 aa10.59□□□□□ -0.71
NPAS4-202ENST00000524617 HOXC9P31274 260 aa10.59□□□□□ -0.71
NPAS4-202ENST00000524617 CHRNA2Q15822 529 aa10.59□□□□□ -0.71
NPAS4-202ENST00000524617 UNC5CLQ8IV45 518 aa10.59□□□□□ -0.71
NPAS4-202ENST00000524617 AXIN2Q9Y2T1 843 aa10.59□□□□□ -0.71
NPAS4-202ENST00000524617 EMILIN1Q9Y6C2 1016 aa10.59□□□□□ -0.71
NPAS4-202ENST00000524617 COL3A1P02461 1466 aaPredicted RBP10.59□□□□□ -0.71
NPAS4-202ENST00000524617 FAM208AQ9UK61 1670 aaKnown RBP10.59□□□□□ -0.71
NPAS4-202ENST00000524617 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
NPAS4-202ENST00000524617 SOX12O15370 315 aa10.58□□□□□ -0.72
NPAS4-202ENST00000524617 RALBP1Q15311 655 aa10.58□□□□□ -0.72
NPAS4-202ENST00000524617 NGLY1Q96IV0 654 aa10.58□□□□□ -0.72
NPAS4-202ENST00000524617 BTG4Q9NY30 223 aa10.58□□□□□ -0.72
NPAS4-202ENST00000524617 RGS17Q9UGC6 210 aaPredicted RBP10.58□□□□□ -0.72
NPAS4-202ENST00000524617 VPS72Q15906 364 aa10.57□□□□□ -0.72
NPAS4-202ENST00000524617 ZNF772Q68DY9 489 aaPredicted RBP10.57□□□□□ -0.72
NPAS4-202ENST00000524617 PRKRIP1Q9H875 184 aaPredicted RBP10.57□□□□□ -0.72
NPAS4-202ENST00000524617 USP21Q9UK80 565 aa10.57□□□□□ -0.72
NPAS4-202ENST00000524617 CRB1P82279 1406 aa10.57□□□□□ -0.72
NPAS4-202ENST00000524617 WDR17Q8IZU2 1322 aa10.57□□□□□ -0.72
NPAS4-202ENST00000524617 GLI3P10071 1580 aa10.56□□□□□ -0.72
NPAS4-202ENST00000524617 MAP2P11137 1827 aaKnown RBP10.56□□□□□ -0.72
NPAS4-202ENST00000524617 PPP2R1AP30153 589 aa10.56□□□□□ -0.72
NPAS4-202ENST00000524617 AMPHP49418 695 aa10.56□□□□□ -0.72
NPAS4-202ENST00000524617 ARXQ96QS3 562 aa10.56□□□□□ -0.72
NPAS4-202ENST00000524617 TNNT2P45379 298 aaPredicted RBP10.55□□□□□ -0.72
NPAS4-202ENST00000524617 TRPC5Q9UL62 973 aaPredicted RBP10.55□□□□□ -0.72
NPAS4-202ENST00000524617 RGPD1P0DJD0 1748 aa10.55□□□□□ -0.72
NPAS4-202ENST00000524617 SPATA31A5Q5VU36 1347 aa10.55□□□□□ -0.72
NPAS4-202ENST00000524617 SPATA31A7Q8IWB4 1347 aa10.55□□□□□ -0.72
NPAS4-202ENST00000524617 MYBBP1AQ9BQG0 1328 aaKnown RBP10.55□□□□□ -0.72
NPAS4-202ENST00000524617 RGPD5Q99666 1765 aa10.54□□□□□ -0.72
NPAS4-202ENST00000524617 PLEKHG2Q9H7P9 1386 aa10.54□□□□□ -0.72
NPAS4-202ENST00000524617 DISP2A7MBM2 1401 aa10.54□□□□□ -0.72
NPAS4-202ENST00000524617 MTHFSP49914 203 aa10.54□□□□□ -0.72
NPAS4-202ENST00000524617 HSP90AB2PQ58FF8 381 aa10.54□□□□□ -0.72
NPAS4-202ENST00000524617 ANKRD24Q8TF21 1146 aa10.54□□□□□ -0.72
NPAS4-202ENST00000524617 SPATA31A1Q5TZJ5 1347 aa10.54□□□□□ -0.72
NPAS4-202ENST00000524617 THSD7AQ9UPZ6 1657 aa10.53□□□□□ -0.72
NPAS4-202ENST00000524617 ZBTB7CA1YPR0 619 aa10.53□□□□□ -0.72
NPAS4-202ENST00000524617 LARP1Q6PKG0 1096 aaKnown RBP10.53□□□□□ -0.72
NPAS4-202ENST00000524617 PHF23Q9BUL5 403 aaPredicted RBP10.53□□□□□ -0.72
NPAS4-202ENST00000524617 CARD10Q9BWT7 1032 aa10.53□□□□□ -0.72
NPAS4-202ENST00000524617 WNK3Q9BYP7 1800 aa10.53□□□□□ -0.72
NPAS4-202ENST00000524617 IL13P35225 146 aa10.52□□□□□ -0.73
NPAS4-202ENST00000524617 EIF4A2Q14240 407 aaKnown RBP10.52□□□□□ -0.73
NPAS4-202ENST00000524617 POTEAQ6S8J7 498 aa10.52□□□□□ -0.73
NPAS4-202ENST00000524617 GJD4Q96KN9 370 aaPredicted RBP10.52□□□□□ -0.73
NPAS4-202ENST00000524617 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
NPAS4-202ENST00000524617 IGSF1Q8N6C5 1336 aa10.52□□□□□ -0.73
NPAS4-202ENST00000524617 KDRP35968 1356 aa10.52□□□□□ -0.73
NPAS4-202ENST00000524617 ONECUT3O60422 494 aaPredicted RBP10.51□□□□□ -0.73
NPAS4-202ENST00000524617 RBM6P78332 1123 aaKnown RBP10.51□□□□□ -0.73
NPAS4-202ENST00000524617 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
NPAS4-202ENST00000524617 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
NPAS4-202ENST00000524617 STRN4Q9NRL3 753 aa10.51□□□□□ -0.73
NPAS4-202ENST00000524617 PARP4Q9UKK3 1724 aaKnown RBP10.5□□□□□ -0.73
NPAS4-202ENST00000524617 PPM1GO15355 546 aaPredicted RBP10.5□□□□□ -0.73
NPAS4-202ENST00000524617 EVA1CP58658 441 aa10.5□□□□□ -0.73
NPAS4-202ENST00000524617 TOM1L2Q6ZVM7 507 aa10.5□□□□□ -0.73
NPAS4-202ENST00000524617 TCP11L2Q8N4U5 519 aa10.5□□□□□ -0.73
NPAS4-202ENST00000524617 RGS12O14924 1447 aa10.5□□□□□ -0.73
NPAS4-202ENST00000524617 LRRC37A3O60309 1634 aa10.49□□□□□ -0.73
NPAS4-202ENST00000524617 ANP32CO43423 234 aa10.49□□□□□ -0.73
NPAS4-202ENST00000524617 CSB-PGBD3P0DP91 1061 aa10.49□□□□□ -0.73
NPAS4-202ENST00000524617 CNGB1Q14028 1251 aaPredicted RBP10.49□□□□□ -0.73
NPAS4-202ENST00000524617 NBPF6Q5VWK0 638 aa10.49□□□□□ -0.73
NPAS4-202ENST00000524617 NBPF4Q96M43 638 aa10.49□□□□□ -0.73
NPAS4-202ENST00000524617 CFAP53Q96M91 514 aa10.49□□□□□ -0.73
NPAS4-202ENST00000524617 OVOS2A0A0G2JMS6 1433 aa10.49□□□□□ -0.73
NPAS4-202ENST00000524617 MEGF6O75095 1541 aa10.48□□□□□ -0.73
NPAS4-202ENST00000524617 RGPD2P0DJD1 1756 aa10.48□□□□□ -0.73
NPAS4-202ENST00000524617 DIAPH1O60610 1272 aaKnown RBP10.48□□□□□ -0.73
NPAS4-202ENST00000524617 EYA1Q99502 592 aa10.48□□□□□ -0.73
NPAS4-202ENST00000524617 TNS2Q63HR2 1409 aa10.48□□□□□ -0.73
NPAS4-202ENST00000524617 RXRBP28702 533 aa10.47□□□□□ -0.73
NPAS4-202ENST00000524617 LTV1Q96GA3 475 aaPredicted RBP10.47□□□□□ -0.73
NPAS4-202ENST00000524617 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
NPAS4-202ENST00000524617 NLRP2Q9NX02 1062 aa10.47□□□□□ -0.73
NPAS4-202ENST00000524617 PKD1L3Q7Z443 1732 aa10.47□□□□□ -0.73
NPAS4-202ENST00000524617 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.73
NPAS4-202ENST00000524617 IL2RBP14784 551 aa10.45□□□□□ -0.74
NPAS4-202ENST00000524617 FAM98CQ17RN3 349 aaKnown RBP10.45□□□□□ -0.74
NPAS4-202ENST00000524617 CCDC9Q9Y3X0 531 aaKnown RBP10.45□□□□□ -0.74
NPAS4-202ENST00000524617 SHANK3Q9BYB0 1731 aa10.44□□□□□ -0.74
NPAS4-202ENST00000524617 BCL9O00512 1426 aa10.44□□□□□ -0.74
NPAS4-202ENST00000524617 SEPT12Q8IYM1 358 aa10.44□□□□□ -0.74
NPAS4-202ENST00000524617 USHBP1Q8N6Y0 703 aa10.44□□□□□ -0.74
NPAS4-202ENST00000524617 RTN4Q9NQC3 1192 aaKnown RBP10.44□□□□□ -0.74
NPAS4-202ENST00000524617 USP35Q9P2H5 1018 aa10.44□□□□□ -0.74
NPAS4-202ENST00000524617 NUDCQ9Y266 331 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms