RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 AXIN2Q9Y2T1 843 aa21.28■■□□□ 1
CSTF3-204ENST00000524556 PIK3C2AO00443 1686 aa21.28■■□□□ 1
CSTF3-204ENST00000524556 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
CSTF3-204ENST00000524556 PTF1AQ7RTS3 328 aa21.27■■□□□ 1
CSTF3-204ENST00000524556 WDR17Q8IZU2 1322 aa21.27■□□□□ 0.99
CSTF3-204ENST00000524556 CASZ1Q86V15 1759 aa21.26■□□□□ 0.99
CSTF3-204ENST00000524556 ANO8Q9HCE9 1232 aaPredicted RBP21.26■□□□□ 0.99
CSTF3-204ENST00000524556 AKAP12Q02952 1782 aa21.25■□□□□ 0.99
CSTF3-204ENST00000524556 MARCH10Q8NA82 808 aaPredicted RBP21.25■□□□□ 0.99
CSTF3-204ENST00000524556 CDCA7Q9BWT1 371 aaPredicted RBP21.25■□□□□ 0.99
CSTF3-204ENST00000524556 RGPD5Q99666 1765 aa21.25■□□□□ 0.99
CSTF3-204ENST00000524556 BCL9O00512 1426 aa21.24■□□□□ 0.99
CSTF3-204ENST00000524556 PROM2Q8N271 834 aa21.24■□□□□ 0.99
CSTF3-204ENST00000524556 ARHGEF25Q86VW2 580 aa21.23■□□□□ 0.99
CSTF3-204ENST00000524556 EVC2Q86UK5 1308 aa21.23■□□□□ 0.99
CSTF3-204ENST00000524556 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
CSTF3-204ENST00000524556 KCNH5Q8NCM2 988 aa21.21■□□□□ 0.99
CSTF3-204ENST00000524556 ZNF692Q9BU19 519 aaPredicted RBP21.21■□□□□ 0.99
CSTF3-204ENST00000524556 CARD10Q9BWT7 1032 aa21.21■□□□□ 0.99
CSTF3-204ENST00000524556 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
CSTF3-204ENST00000524556 TTC21BQ7Z4L5 1316 aa21.21■□□□□ 0.99
CSTF3-204ENST00000524556 TRPM1Q7Z4N2 1603 aa21.19■□□□□ 0.98
CSTF3-204ENST00000524556 CSB-PGBD3P0DP91 1061 aa21.18■□□□□ 0.98
CSTF3-204ENST00000524556 EXOC5O00471 708 aa21.17■□□□□ 0.98
CSTF3-204ENST00000524556 SOX12O15370 315 aa21.17■□□□□ 0.98
CSTF3-204ENST00000524556 ZBTB7AO95365 584 aa21.17■□□□□ 0.98
CSTF3-204ENST00000524556 TXNRD1Q16881 649 aa21.17■□□□□ 0.98
CSTF3-204ENST00000524556 L3MBTL2Q969R5 705 aa21.17■□□□□ 0.98
CSTF3-204ENST00000524556 TTC21AQ8NDW8 1320 aa21.17■□□□□ 0.98
CSTF3-204ENST00000524556 PTGER2P43116 358 aa21.16■□□□□ 0.98
CSTF3-204ENST00000524556 UTRNP46939 3433 aa21.16■□□□□ 0.98
CSTF3-204ENST00000524556 MYOM1P52179 1685 aa21.15■□□□□ 0.98
CSTF3-204ENST00000524556 STK32BQ9NY57 414 aa21.15■□□□□ 0.98
CSTF3-204ENST00000524556 NFAT5O94916 1531 aa21.14■□□□□ 0.98
CSTF3-204ENST00000524556 CCDC7Q96M83 1385 aa21.14■□□□□ 0.98
CSTF3-204ENST00000524556 SLC15A2Q16348 729 aa21.14■□□□□ 0.97
CSTF3-204ENST00000524556 ATF5Q9Y2D1 282 aaPredicted RBP21.14■□□□□ 0.97
CSTF3-204ENST00000524556 ABCC6O95255 1503 aa21.12■□□□□ 0.97
CSTF3-204ENST00000524556 TNS2Q63HR2 1409 aa21.11■□□□□ 0.97
CSTF3-204ENST00000524556 KTN1Q86UP2 1357 aaKnown RBP21.1■□□□□ 0.97
CSTF3-204ENST00000524556 NHSQ6T4R5 1651 aa21.09■□□□□ 0.97
CSTF3-204ENST00000524556 MON2Q7Z3U7 1717 aa21.09■□□□□ 0.97
CSTF3-204ENST00000524556 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
CSTF3-204ENST00000524556 SYT17Q9BSW7 474 aa21.08■□□□□ 0.97
CSTF3-204ENST00000524556 FHDC1Q9C0D6 1143 aaPredicted RBP21.08■□□□□ 0.97
CSTF3-204ENST00000524556 MTFR1LQ9H019 292 aa21.08■□□□□ 0.97
CSTF3-204ENST00000524556 KAT6BQ8WYB5 2073 aa21.08■□□□□ 0.96
CSTF3-204ENST00000524556 SGIP1Q9BQI5 828 aa21.07■□□□□ 0.96
CSTF3-204ENST00000524556 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
CSTF3-204ENST00000524556 USP31Q70CQ4 1352 aa21.06■□□□□ 0.96
CSTF3-204ENST00000524556 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
CSTF3-204ENST00000524556 NLRP2Q9NX02 1062 aa21.05■□□□□ 0.96
CSTF3-204ENST00000524556 CHD4Q14839 1912 aa21.05■□□□□ 0.96
CSTF3-204ENST00000524556 USP54Q70EL1 1684 aa21.05■□□□□ 0.96
CSTF3-204ENST00000524556 ERBB3P21860 1342 aa21.04■□□□□ 0.96
CSTF3-204ENST00000524556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
CSTF3-204ENST00000524556 ZNF784Q8NCA9 323 aaPredicted RBP21.04■□□□□ 0.96
CSTF3-204ENST00000524556 LTN1O94822 1766 aa21.04■□□□□ 0.96
CSTF3-204ENST00000524556 IL2RBP14784 551 aa21.03■□□□□ 0.96
CSTF3-204ENST00000524556 BTAF1O14981 1849 aa21.03■□□□□ 0.96
CSTF3-204ENST00000524556 PAPPAQ13219 1627 aa21.03■□□□□ 0.96
CSTF3-204ENST00000524556 NME9Q86XW9 330 aa21.01■□□□□ 0.95
CSTF3-204ENST00000524556 ARXQ96QS3 562 aa21.01■□□□□ 0.95
CSTF3-204ENST00000524556 NEUROD1Q13562 356 aa21■□□□□ 0.95
CSTF3-204ENST00000524556 CD163L1Q9NR16 1453 aa21■□□□□ 0.95
CSTF3-204ENST00000524556 SBNO2Q9Y2G9 1366 aa20.99■□□□□ 0.95
CSTF3-204ENST00000524556 ANKRD24Q8TF21 1146 aa20.99■□□□□ 0.95
CSTF3-204ENST00000524556 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
CSTF3-204ENST00000524556 ZNF827Q17R98 1081 aa20.97■□□□□ 0.95
CSTF3-204ENST00000524556 LRRC4BQ9NT99 713 aa20.97■□□□□ 0.95
CSTF3-204ENST00000524556 HDGFL2Q7Z4V5 671 aaPredicted RBP20.96■□□□□ 0.95
CSTF3-204ENST00000524556 TMC1Q8TDI8 760 aa20.96■□□□□ 0.95
CSTF3-204ENST00000524556 SLC12A5Q9H2X9 1139 aa20.94■□□□□ 0.94
CSTF3-204ENST00000524556 EDC4Q6P2E9 1401 aaKnown RBP20.94■□□□□ 0.94
CSTF3-204ENST00000524556 QSER1Q2KHR3 1735 aa20.93■□□□□ 0.94
CSTF3-204ENST00000524556 AKT1S1Q96B36 256 aa20.93■□□□□ 0.94
CSTF3-204ENST00000524556 GOLGB1Q14789 3259 aaKnown RBP20.93■□□□□ 0.94
CSTF3-204ENST00000524556 SLC27A3Q5K4L6 730 aa20.92■□□□□ 0.94
CSTF3-204ENST00000524556 SLC16A10Q8TF71 515 aa20.92■□□□□ 0.94
CSTF3-204ENST00000524556 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
CSTF3-204ENST00000524556 COL24A1Q17RW2 1714 aa20.91■□□□□ 0.94
CSTF3-204ENST00000524556 DDX54Q8TDD1 881 aaKnown RBP20.91■□□□□ 0.94
CSTF3-204ENST00000524556 IP6K1Q92551 441 aa20.91■□□□□ 0.94
CSTF3-204ENST00000524556 TERF2IPQ9NYB0 399 aa20.91■□□□□ 0.94
CSTF3-204ENST00000524556 FAM208AQ9UK61 1670 aaKnown RBP20.9■□□□□ 0.94
CSTF3-204ENST00000524556 A0A1W2PP64 1363 aa20.89■□□□□ 0.93
CSTF3-204ENST00000524556 GPR162Q16538 588 aa20.89■□□□□ 0.93
CSTF3-204ENST00000524556 LTV1Q96GA3 475 aaPredicted RBP20.88■□□□□ 0.93
CSTF3-204ENST00000524556 TUBGCP6Q96RT7 1819 aa20.88■□□□□ 0.93
CSTF3-204ENST00000524556 PNPLA7Q6ZV29 1317 aa20.87■□□□□ 0.93
CSTF3-204ENST00000524556 POLD1P28340 1107 aa20.87■□□□□ 0.93
CSTF3-204ENST00000524556 C1QTNF8P60827 252 aa20.87■□□□□ 0.93
CSTF3-204ENST00000524556 PUS7Q96PZ0 661 aaKnown RBP20.87■□□□□ 0.93
CSTF3-204ENST00000524556 LY75O60449 1722 aa20.85■□□□□ 0.93
CSTF3-204ENST00000524556 PRIM1P49642 420 aaKnown RBP20.85■□□□□ 0.93
CSTF3-204ENST00000524556 TFCP2L1Q9NZI6 479 aa20.85■□□□□ 0.93
CSTF3-204ENST00000524556 SENP3-EIF4A1A0A087X0R7 540 aa20.84■□□□□ 0.93
CSTF3-204ENST00000524556 KCNQ4P56696 695 aa20.84■□□□□ 0.93
CSTF3-204ENST00000524556 KLHL34Q8N239 644 aa20.84■□□□□ 0.93
CSTF3-204ENST00000524556 SYTL4Q96C24 671 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms