RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 ARHGEF25Q86VW2 580 aa13.76□□□□□ -0.21
CNKSR1-209ENST00000524529 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
CNKSR1-209ENST00000524529 APBA3O96018 575 aa13.75□□□□□ -0.21
CNKSR1-209ENST00000524529 R3HDM1Q15032 1099 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-209ENST00000524529 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
CNKSR1-209ENST00000524529 KTN1Q86UP2 1357 aaKnown RBP13.74□□□□□ -0.21
CNKSR1-209ENST00000524529 TTC21AQ8NDW8 1320 aa13.74□□□□□ -0.21
CNKSR1-209ENST00000524529 SOX12O15370 315 aa13.74□□□□□ -0.21
CNKSR1-209ENST00000524529 LTN1O94822 1766 aa13.73□□□□□ -0.21
CNKSR1-209ENST00000524529 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
CNKSR1-209ENST00000524529 USP31Q70CQ4 1352 aa13.72□□□□□ -0.21
CNKSR1-209ENST00000524529 TOM1L2Q6ZVM7 507 aa13.72□□□□□ -0.21
CNKSR1-209ENST00000524529 PTF1AQ7RTS3 328 aa13.72□□□□□ -0.21
CNKSR1-209ENST00000524529 SLC12A5Q9H2X9 1139 aa13.72□□□□□ -0.21
CNKSR1-209ENST00000524529 NME9Q86XW9 330 aa13.71□□□□□ -0.21
CNKSR1-209ENST00000524529 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.71□□□□□ -0.21
CNKSR1-209ENST00000524529 KCNH5Q8NCM2 988 aa13.71□□□□□ -0.21
CNKSR1-209ENST00000524529 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.22
CNKSR1-209ENST00000524529 TONSLQ96HA7 1378 aa13.71□□□□□ -0.22
CNKSR1-209ENST00000524529 OVOS2A0A0G2JMS6 1433 aa13.7□□□□□ -0.22
CNKSR1-209ENST00000524529 OVOS2A0A0J9YW53 1432 aa13.7□□□□□ -0.22
CNKSR1-209ENST00000524529 OVOS2Q6IE36 1432 aa13.7□□□□□ -0.22
CNKSR1-209ENST00000524529 RGPD3A6NKT7 1758 aaPredicted RBP13.7□□□□□ -0.22
CNKSR1-209ENST00000524529 RGPD4Q7Z3J3 1758 aa13.7□□□□□ -0.22
CNKSR1-209ENST00000524529 DDB1Q16531 1140 aa13.69□□□□□ -0.22
CNKSR1-209ENST00000524529 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
CNKSR1-209ENST00000524529 TESK2Q96S53 571 aa13.69□□□□□ -0.22
CNKSR1-209ENST00000524529 CARD10Q9BWT7 1032 aa13.69□□□□□ -0.22
CNKSR1-209ENST00000524529 A0A1W2PP64 1363 aa13.69□□□□□ -0.22
CNKSR1-209ENST00000524529 ABCC6O95255 1503 aa13.69□□□□□ -0.22
CNKSR1-209ENST00000524529 TMC1Q8TDI8 760 aa13.68□□□□□ -0.22
CNKSR1-209ENST00000524529 KAT6BQ8WYB5 2073 aa13.67□□□□□ -0.22
CNKSR1-209ENST00000524529 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
CNKSR1-209ENST00000524529 CLSPNQ9HAW4 1339 aa13.66□□□□□ -0.22
CNKSR1-209ENST00000524529 BCL9O00512 1426 aa13.66□□□□□ -0.22
CNKSR1-209ENST00000524529 ST20-MTHFSA0A0A6YYL1 179 aa13.66□□□□□ -0.22
CNKSR1-209ENST00000524529 CSB-PGBD3P0DP91 1061 aa13.66□□□□□ -0.22
CNKSR1-209ENST00000524529 ERBB3P21860 1342 aa13.65□□□□□ -0.22
CNKSR1-209ENST00000524529 PROM2Q8N271 834 aa13.65□□□□□ -0.22
CNKSR1-209ENST00000524529 PUS7Q96PZ0 661 aaKnown RBP13.65□□□□□ -0.22
CNKSR1-209ENST00000524529 RGPD2P0DJD1 1756 aa13.64□□□□□ -0.23
CNKSR1-209ENST00000524529 CCDC7Q96M83 1385 aa13.64□□□□□ -0.23
CNKSR1-209ENST00000524529 PLSCR1O15162 318 aa13.64□□□□□ -0.23
CNKSR1-209ENST00000524529 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
CNKSR1-209ENST00000524529 ANO8Q9HCE9 1232 aaPredicted RBP13.64□□□□□ -0.23
CNKSR1-209ENST00000524529 TNS2Q63HR2 1409 aa13.64□□□□□ -0.23
CNKSR1-209ENST00000524529 CASZ1Q86V15 1759 aa13.63□□□□□ -0.23
CNKSR1-209ENST00000524529 C11orf95C9JLR9 678 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-209ENST00000524529 CDCA7Q9BWT1 371 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-209ENST00000524529 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
CNKSR1-209ENST00000524529 FBLN1P23142 703 aa13.62□□□□□ -0.23
CNKSR1-209ENST00000524529 NHSQ6T4R5 1651 aa13.62□□□□□ -0.23
CNKSR1-209ENST00000524529 EXOC5O00471 708 aa13.61□□□□□ -0.23
CNKSR1-209ENST00000524529 KCNQ2O43526 872 aa13.61□□□□□ -0.23
CNKSR1-209ENST00000524529 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
CNKSR1-209ENST00000524529 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
CNKSR1-209ENST00000524529 BTAF1O14981 1849 aa13.6□□□□□ -0.23
CNKSR1-209ENST00000524529 NBPF14Q5TI25 921 aa13.6□□□□□ -0.23
CNKSR1-209ENST00000524529 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
CNKSR1-209ENST00000524529 PDGFDQ9GZP0 370 aaPredicted RBP13.6□□□□□ -0.23
CNKSR1-209ENST00000524529 NLRP2Q9NX02 1062 aa13.6□□□□□ -0.23
CNKSR1-209ENST00000524529 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
CNKSR1-209ENST00000524529 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
CNKSR1-209ENST00000524529 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.23
CNKSR1-209ENST00000524529 IP6K1Q92551 441 aa13.58□□□□□ -0.24
CNKSR1-209ENST00000524529 ANKRD36BQ8N2N9 1353 aa13.58□□□□□ -0.24
CNKSR1-209ENST00000524529 USP47Q96K76 1375 aa13.58□□□□□ -0.24
CNKSR1-209ENST00000524529 IL2RBP14784 551 aa13.57□□□□□ -0.24
CNKSR1-209ENST00000524529 TXNRD1Q16881 649 aa13.57□□□□□ -0.24
CNKSR1-209ENST00000524529 ACSBG1Q96GR2 724 aa13.57□□□□□ -0.24
CNKSR1-209ENST00000524529 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
CNKSR1-209ENST00000524529 MAP3K19Q56UN5 1328 aa13.57□□□□□ -0.24
CNKSR1-209ENST00000524529 MYOM1P52179 1685 aa13.56□□□□□ -0.24
CNKSR1-209ENST00000524529 PAPPAQ13219 1627 aa13.56□□□□□ -0.24
CNKSR1-209ENST00000524529 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
CNKSR1-209ENST00000524529 HOXC9P31274 260 aa13.55□□□□□ -0.24
CNKSR1-209ENST00000524529 LTV1Q96GA3 475 aaPredicted RBP13.55□□□□□ -0.24
CNKSR1-209ENST00000524529 FYB1O15117 783 aa13.54□□□□□ -0.24
CNKSR1-209ENST00000524529 COG3Q96JB2 828 aa13.54□□□□□ -0.24
CNKSR1-209ENST00000524529 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
CNKSR1-209ENST00000524529 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
CNKSR1-209ENST00000524529 DOT1LQ8TEK3 1739 aa13.53□□□□□ -0.24
CNKSR1-209ENST00000524529 TMF1P82094 1093 aa13.52□□□□□ -0.25
CNKSR1-209ENST00000524529 RRS1Q15050 365 aaKnown RBP13.52□□□□□ -0.25
CNKSR1-209ENST00000524529 MEGF6O75095 1541 aa13.52□□□□□ -0.25
CNKSR1-209ENST00000524529 TUBGCP6Q96RT7 1819 aa13.51□□□□□ -0.25
CNKSR1-209ENST00000524529 SLC24A1O60721 1099 aa13.51□□□□□ -0.25
CNKSR1-209ENST00000524529 PTGER2P43116 358 aa13.51□□□□□ -0.25
CNKSR1-209ENST00000524529 SLC15A2Q16348 729 aa13.51□□□□□ -0.25
CNKSR1-209ENST00000524529 LRRC4BQ9NT99 713 aa13.51□□□□□ -0.25
CNKSR1-209ENST00000524529 ZBTB7AO95365 584 aa13.5□□□□□ -0.25
CNKSR1-209ENST00000524529 AMPHP49418 695 aa13.5□□□□□ -0.25
CNKSR1-209ENST00000524529 CARD14Q9BXL6 1004 aa13.5□□□□□ -0.25
CNKSR1-209ENST00000524529 LY75O60449 1722 aa13.5□□□□□ -0.25
CNKSR1-209ENST00000524529 YY1P25490 414 aa13.49□□□□□ -0.25
CNKSR1-209ENST00000524529 NBPF6Q5VWK0 638 aa13.49□□□□□ -0.25
CNKSR1-209ENST00000524529 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
CNKSR1-209ENST00000524529 NBPF4Q96M43 638 aa13.49□□□□□ -0.25
CNKSR1-209ENST00000524529 STK32BQ9NY57 414 aa13.49□□□□□ -0.25
CNKSR1-209ENST00000524529 RTL1A6NKG5 1358 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms