RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
PUM1-213ENST00000524516 ARHGEF28Q8N1W1 1705 aaKnown RBP12.45□□□□□ -0.42
PUM1-213ENST00000524516 NGDNQ8NEJ9 315 aaKnown RBP12.44□□□□□ -0.42
PUM1-213ENST00000524516 YTHDC2Q9H6S0 1430 aaKnown RBP12.44□□□□□ -0.42
PUM1-213ENST00000524516 NUTM2GQ5VZR2 741 aa12.43□□□□□ -0.42
PUM1-213ENST00000524516 CRB1P82279 1406 aa12.43□□□□□ -0.42
PUM1-213ENST00000524516 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
PUM1-213ENST00000524516 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
PUM1-213ENST00000524516 BCL9O00512 1426 aa12.41□□□□□ -0.42
PUM1-213ENST00000524516 APLP2Q06481 763 aa12.41□□□□□ -0.42
PUM1-213ENST00000524516 C16orf71Q8IYS4 520 aaPredicted RBP12.41□□□□□ -0.42
PUM1-213ENST00000524516 MARCH10Q8NA82 808 aaPredicted RBP12.41□□□□□ -0.42
PUM1-213ENST00000524516 ANKRD30BQ9BXX2 1392 aa12.41□□□□□ -0.42
PUM1-213ENST00000524516 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.42
PUM1-213ENST00000524516 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
PUM1-213ENST00000524516 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.43
PUM1-213ENST00000524516 RBM46Q8TBY0 533 aaKnown RBP12.39□□□□□ -0.43
PUM1-213ENST00000524516 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
PUM1-213ENST00000524516 WNK3Q9BYP7 1800 aa12.38□□□□□ -0.43
PUM1-213ENST00000524516 ROCK1Q13464 1354 aa12.38□□□□□ -0.43
PUM1-213ENST00000524516 EIF3AQ14152 1382 aaKnown RBP12.38□□□□□ -0.43
PUM1-213ENST00000524516 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
PUM1-213ENST00000524516 PCNTO95613 3336 aa12.37□□□□□ -0.43
PUM1-213ENST00000524516 ZBTB7CA1YPR0 619 aa12.37□□□□□ -0.43
PUM1-213ENST00000524516 TOM1L2Q6ZVM7 507 aa12.37□□□□□ -0.43
PUM1-213ENST00000524516 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
PUM1-213ENST00000524516 TFCP2L1Q9NZI6 479 aa12.37□□□□□ -0.43
PUM1-213ENST00000524516 PNPLA7Q6ZV29 1317 aa12.37□□□□□ -0.43
PUM1-213ENST00000524516 BRD4O60885 1362 aaPredicted RBP12.36□□□□□ -0.43
PUM1-213ENST00000524516 CPDO75976 1380 aa12.36□□□□□ -0.43
PUM1-213ENST00000524516 MSH5O43196 834 aa12.36□□□□□ -0.43
PUM1-213ENST00000524516 FSTL1Q12841 308 aa12.36□□□□□ -0.43
PUM1-213ENST00000524516 NMRK2Q9NPI5 230 aa12.36□□□□□ -0.43
PUM1-213ENST00000524516 POGKQ9P215 609 aa12.36□□□□□ -0.43
PUM1-213ENST00000524516 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
PUM1-213ENST00000524516 AKT1S1Q96B36 256 aa12.34□□□□□ -0.43
PUM1-213ENST00000524516 HIRIP3Q9BW71 556 aaPredicted RBP12.34□□□□□ -0.43
PUM1-213ENST00000524516 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
PUM1-213ENST00000524516 CD2APQ9Y5K6 639 aa12.34□□□□□ -0.43
PUM1-213ENST00000524516 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
PUM1-213ENST00000524516 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
PUM1-213ENST00000524516 MLLT1Q03111 559 aaPredicted RBP12.33□□□□□ -0.44
PUM1-213ENST00000524516 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
PUM1-213ENST00000524516 PIK3C2GO75747 1445 aa12.32□□□□□ -0.44
PUM1-213ENST00000524516 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
PUM1-213ENST00000524516 BTAF1O14981 1849 aa12.32□□□□□ -0.44
PUM1-213ENST00000524516 USP19O94966 1318 aa12.31□□□□□ -0.44
PUM1-213ENST00000524516 IGSF1Q8N6C5 1336 aa12.31□□□□□ -0.44
PUM1-213ENST00000524516 ITSN1Q15811 1721 aa12.31□□□□□ -0.44
PUM1-213ENST00000524516 EXOC5O00471 708 aa12.3□□□□□ -0.44
PUM1-213ENST00000524516 RGL3Q3MIN7 710 aa12.3□□□□□ -0.44
PUM1-213ENST00000524516 USP6P35125 1406 aa12.29□□□□□ -0.44
PUM1-213ENST00000524516 ABTB2Q8N961 1025 aa12.29□□□□□ -0.44
PUM1-213ENST00000524516 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
PUM1-213ENST00000524516 KIAA1210Q9ULL0 1709 aa12.28□□□□□ -0.44
PUM1-213ENST00000524516 GCP02774 474 aa12.28□□□□□ -0.44
PUM1-213ENST00000524516 SLC27A3Q5K4L6 730 aa12.28□□□□□ -0.44
PUM1-213ENST00000524516 TRPM1Q7Z4N2 1603 aa12.28□□□□□ -0.44
PUM1-213ENST00000524516 PIK3C2AO00443 1686 aa12.28□□□□□ -0.44
PUM1-213ENST00000524516 CICQ96RK0 1608 aaPredicted RBP12.27□□□□□ -0.44
PUM1-213ENST00000524516 ITGAEP38570 1179 aa12.27□□□□□ -0.45
PUM1-213ENST00000524516 WDR17Q8IZU2 1322 aa12.26□□□□□ -0.45
PUM1-213ENST00000524516 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
PUM1-213ENST00000524516 CSB-PGBD3P0DP91 1061 aa12.25□□□□□ -0.45
PUM1-213ENST00000524516 NLRP13Q86W25 1043 aa12.25□□□□□ -0.45
PUM1-213ENST00000524516 SMC1BQ8NDV3 1235 aa12.25□□□□□ -0.45
PUM1-213ENST00000524516 KCNQ4P56696 695 aa12.24□□□□□ -0.45
PUM1-213ENST00000524516 ABHD8Q96I13 439 aa12.24□□□□□ -0.45
PUM1-213ENST00000524516 PRDM10Q9NQV6 1147 aa12.24□□□□□ -0.45
PUM1-213ENST00000524516 ABCC6O95255 1503 aa12.23□□□□□ -0.45
PUM1-213ENST00000524516 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
PUM1-213ENST00000524516 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
PUM1-213ENST00000524516 FOXN1O15353 648 aa12.22□□□□□ -0.45
PUM1-213ENST00000524516 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
PUM1-213ENST00000524516 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.45
PUM1-213ENST00000524516 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
PUM1-213ENST00000524516 CFAP70Q5T0N1 1121 aa12.21□□□□□ -0.45
PUM1-213ENST00000524516 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
PUM1-213ENST00000524516 ACEP12821 1306 aa12.2□□□□□ -0.46
PUM1-213ENST00000524516 CCDC85CA6NKD9 419 aa12.2□□□□□ -0.46
PUM1-213ENST00000524516 NUDT16Q96DE0 195 aaKnown RBP12.2□□□□□ -0.46
PUM1-213ENST00000524516 CARD10Q9BWT7 1032 aa12.2□□□□□ -0.46
PUM1-213ENST00000524516 TRAK1Q9UPV9 953 aa12.2□□□□□ -0.46
PUM1-213ENST00000524516 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
PUM1-213ENST00000524516 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
PUM1-213ENST00000524516 CTCFP49711 727 aaPredicted RBP12.19□□□□□ -0.46
PUM1-213ENST00000524516 ARHGAP27Q6ZUM4 889 aa12.19□□□□□ -0.46
PUM1-213ENST00000524516 RRAGCQ9HB90 399 aa12.19□□□□□ -0.46
PUM1-213ENST00000524516 C10orf71Q711Q0 1435 aa12.19□□□□□ -0.46
PUM1-213ENST00000524516 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
PUM1-213ENST00000524516 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
PUM1-213ENST00000524516 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
PUM1-213ENST00000524516 BCS1LQ9Y276 419 aa12.18□□□□□ -0.46
PUM1-213ENST00000524516 SPATA31E1Q6ZUB1 1445 aa12.18□□□□□ -0.46
PUM1-213ENST00000524516 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
PUM1-213ENST00000524516 SLC4A1APQ9BWU0 796 aaKnown RBP12.17□□□□□ -0.46
PUM1-213ENST00000524516 AXIN2Q9Y2T1 843 aa12.17□□□□□ -0.46
PUM1-213ENST00000524516 PKD1L3Q7Z443 1732 aa12.17□□□□□ -0.46
PUM1-213ENST00000524516 COL18A1P39060 1754 aa12.16□□□□□ -0.46
PUM1-213ENST00000524516 C9orf131Q5VYM1 1079 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 411 ms