RNA–Protein interactions for RNA: ENST00000524208.5

POLB-215, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-215ENST00000524208 LAMC1P11047 1609 aa11.4□□□□□ -0.58
POLB-215ENST00000524208 DPYSL4O14531 572 aa11.4□□□□□ -0.58
POLB-215ENST00000524208 SEMA3EO15041 775 aa11.4□□□□□ -0.58
POLB-215ENST00000524208 SLAIN2Q9P270 581 aa11.4□□□□□ -0.58
POLB-215ENST00000524208 LRPPRCP42704 1394 aaKnown RBP11.4□□□□□ -0.59
POLB-215ENST00000524208 DHX57Q6P158 1386 aaKnown RBP11.4□□□□□ -0.59
POLB-215ENST00000524208 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
POLB-215ENST00000524208 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
POLB-215ENST00000524208 C19orf44Q9H6X5 657 aa11.39□□□□□ -0.59
POLB-215ENST00000524208 ERBB3P21860 1342 aa11.38□□□□□ -0.59
POLB-215ENST00000524208 YTHDC2Q9H6S0 1430 aaKnown RBP11.38□□□□□ -0.59
POLB-215ENST00000524208 SPDYE16A6NNV3 312 aaPredicted RBP11.38□□□□□ -0.59
POLB-215ENST00000524208 HOXB1P14653 301 aaPredicted RBP11.38□□□□□ -0.59
POLB-215ENST00000524208 HRCP23327 699 aa11.38□□□□□ -0.59
POLB-215ENST00000524208 BRINP3Q76B58 766 aa11.38□□□□□ -0.59
POLB-215ENST00000524208 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
POLB-215ENST00000524208 PRKCSHP14314 528 aaPredicted RBP11.37□□□□□ -0.59
POLB-215ENST00000524208 SMYD5Q6GMV2 418 aa11.37□□□□□ -0.59
POLB-215ENST00000524208 C14orf37Q86TY3 774 aa11.37□□□□□ -0.59
POLB-215ENST00000524208 SHPRHQ149N8 1683 aa11.36□□□□□ -0.59
POLB-215ENST00000524208 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
POLB-215ENST00000524208 PDIA6Q15084 440 aa11.36□□□□□ -0.59
POLB-215ENST00000524208 TMEM132EQ6IEE7 984 aa11.36□□□□□ -0.59
POLB-215ENST00000524208 ATF3P18847 181 aa11.35□□□□□ -0.59
POLB-215ENST00000524208 MAP3K9P80192 1104 aa11.35□□□□□ -0.59
POLB-215ENST00000524208 LMOD2Q6P5Q4 547 aa11.35□□□□□ -0.59
POLB-215ENST00000524208 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
POLB-215ENST00000524208 ABCC11Q96J66 1382 aa11.35□□□□□ -0.59
POLB-215ENST00000524208 FMN2Q9NZ56 1722 aa11.35□□□□□ -0.59
POLB-215ENST00000524208 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
POLB-215ENST00000524208 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
POLB-215ENST00000524208 CFAP70Q5T0N1 1121 aa11.34□□□□□ -0.59
POLB-215ENST00000524208 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
POLB-215ENST00000524208 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
POLB-215ENST00000524208 JCADQ9P266 1359 aa11.33□□□□□ -0.6
POLB-215ENST00000524208 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
POLB-215ENST00000524208 DDX17Q92841 729 aaKnown RBP11.33□□□□□ -0.6
POLB-215ENST00000524208 UPF1Q92900 1129 aaKnown RBP eCLIP11.33□□□□□ -0.6
POLB-215ENST00000524208 RGS17Q9UGC6 210 aaPredicted RBP11.33□□□□□ -0.6
POLB-215ENST00000524208 WAPLQ7Z5K2 1190 aa11.32□□□□□ -0.6
POLB-215ENST00000524208 STK26Q9P289 416 aa11.32□□□□□ -0.6
POLB-215ENST00000524208 PXDNQ92626 1479 aa11.32□□□□□ -0.6
POLB-215ENST00000524208 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
POLB-215ENST00000524208 TBC1D12O60347 775 aa11.31□□□□□ -0.6
POLB-215ENST00000524208 SLC34A2O95436 690 aa11.31□□□□□ -0.6
POLB-215ENST00000524208 ARHGEF28Q8N1W1 1705 aaKnown RBP11.31□□□□□ -0.6
POLB-215ENST00000524208 PNPLA6Q8IY17 1366 aa11.29□□□□□ -0.6
POLB-215ENST00000524208 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
POLB-215ENST00000524208 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
POLB-215ENST00000524208 ORAI2Q96SN7 254 aa11.29□□□□□ -0.6
POLB-215ENST00000524208 ZNF316A6NFI3 1004 aaPredicted RBP11.28□□□□□ -0.6
POLB-215ENST00000524208 KIAA1210Q9ULL0 1709 aa11.27□□□□□ -0.61
POLB-215ENST00000524208 MLLT3P42568 568 aaPredicted RBP11.27□□□□□ -0.61
POLB-215ENST00000524208 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
POLB-215ENST00000524208 COL22A1Q8NFW1 1626 aaPredicted RBP11.27□□□□□ -0.61
POLB-215ENST00000524208 DCAF11Q8TEB1 546 aa11.26□□□□□ -0.61
POLB-215ENST00000524208 PRAM1Q96QH2 718 aa11.26□□□□□ -0.61
POLB-215ENST00000524208 SOS2Q07890 1332 aaPredicted RBP11.26□□□□□ -0.61
POLB-215ENST00000524208 KIF1AQ12756 1690 aa11.26□□□□□ -0.61
POLB-215ENST00000524208 EP400Q96L91 3159 aa11.24□□□□□ -0.61
POLB-215ENST00000524208 RGPD8O14715 1765 aaPredicted RBP11.24□□□□□ -0.61
POLB-215ENST00000524208 SOCS7O14512 581 aa11.24□□□□□ -0.61
POLB-215ENST00000524208 POTEAQ6S8J7 498 aa11.24□□□□□ -0.61
POLB-215ENST00000524208 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
POLB-215ENST00000524208 SPATA31A6Q5VVP1 1343 aa11.24□□□□□ -0.61
POLB-215ENST00000524208 PRR36Q9H6K5 1346 aa11.24□□□□□ -0.61
POLB-215ENST00000524208 ATP7BP35670 1465 aa11.24□□□□□ -0.61
POLB-215ENST00000524208 TULP4Q9NRJ4 1543 aa11.24□□□□□ -0.61
POLB-215ENST00000524208 NUTM2FA1L443 756 aa11.23□□□□□ -0.61
POLB-215ENST00000524208 EVI5O60447 810 aa11.23□□□□□ -0.61
POLB-215ENST00000524208 SAFB2Q14151 953 aaKnown RBP eCLIP11.23□□□□□ -0.61
POLB-215ENST00000524208 ANKARQ7Z5J8 1434 aa11.23□□□□□ -0.61
POLB-215ENST00000524208 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
POLB-215ENST00000524208 TOPAZ1Q8N9V7 1692 aa11.22□□□□□ -0.61
POLB-215ENST00000524208 SIN3AQ96ST3 1273 aa11.22□□□□□ -0.61
POLB-215ENST00000524208 ABCA3Q99758 1704 aa11.22□□□□□ -0.61
POLB-215ENST00000524208 TRPM3Q9HCF6 1732 aaPredicted RBP11.22□□□□□ -0.61
POLB-215ENST00000524208 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
POLB-215ENST00000524208 PTGER2P43116 358 aa11.21□□□□□ -0.61
POLB-215ENST00000524208 XPCQ01831 940 aaPredicted RBP11.21□□□□□ -0.61
POLB-215ENST00000524208 TRAK1Q9UPV9 953 aa11.21□□□□□ -0.61
POLB-215ENST00000524208 NBPF1Q3BBV0 1214 aa11.2□□□□□ -0.62
POLB-215ENST00000524208 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
POLB-215ENST00000524208 HIRIP3Q9BW71 556 aaPredicted RBP11.2□□□□□ -0.62
POLB-215ENST00000524208 PCDHGA4Q9Y5G9 962 aa11.2□□□□□ -0.62
POLB-215ENST00000524208 NPHP3Q7Z494 1330 aa11.19□□□□□ -0.62
POLB-215ENST00000524208 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
POLB-215ENST00000524208 ESCO1Q5FWF5 840 aa11.19□□□□□ -0.62
POLB-215ENST00000524208 ZNF687Q8N1G0 1237 aa11.19□□□□□ -0.62
POLB-215ENST00000524208 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
POLB-215ENST00000524208 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
POLB-215ENST00000524208 MINK1Q8N4C8 1332 aaPredicted RBP11.18□□□□□ -0.62
POLB-215ENST00000524208 FOXO3O43524 673 aa11.18□□□□□ -0.62
POLB-215ENST00000524208 RBM26Q5T8P6 1007 aaKnown RBP11.18□□□□□ -0.62
POLB-215ENST00000524208 ZC3H15Q8WU90 426 aaKnown RBP11.18□□□□□ -0.62
POLB-215ENST00000524208 STAC3Q96MF2 364 aa11.18□□□□□ -0.62
POLB-215ENST00000524208 CRYBG1Q9Y4K1 1723 aa11.18□□□□□ -0.62
POLB-215ENST00000524208 ALS2Q96Q42 1657 aa11.17□□□□□ -0.62
POLB-215ENST00000524208 NUTM2BA6NNL0 878 aaPredicted RBP11.17□□□□□ -0.62
POLB-215ENST00000524208 NUTM2EB1AL46 878 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms