RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ZRANB1Q9UGI0 708 aa29.03■■■□□ 2.24
TRAPPC9-215ENST00000524162 FAM98CQ17RN3 349 aaKnown RBP29.02■■■□□ 2.24
TRAPPC9-215ENST00000524162 CCDC125Q86Z20 511 aa29.02■■■□□ 2.24
TRAPPC9-215ENST00000524162 KIF20BQ96Q89 1820 aa29.01■■■□□ 2.24
TRAPPC9-215ENST00000524162 LARP1Q6PKG0 1096 aaKnown RBP29.01■■■□□ 2.23
TRAPPC9-215ENST00000524162 COG3Q96JB2 828 aa29■■■□□ 2.23
TRAPPC9-215ENST00000524162 KRT27Q7Z3Y8 459 aa28.99■■■□□ 2.23
TRAPPC9-215ENST00000524162 TCP11L2Q8N4U5 519 aa28.99■■■□□ 2.23
TRAPPC9-215ENST00000524162 AXIN2Q9Y2T1 843 aa28.99■■■□□ 2.23
TRAPPC9-215ENST00000524162 WDR17Q8IZU2 1322 aa28.98■■■□□ 2.23
TRAPPC9-215ENST00000524162 FYB1O15117 783 aa28.98■■■□□ 2.23
TRAPPC9-215ENST00000524162 PARP4Q9UKK3 1724 aaKnown RBP28.96■■■□□ 2.23
TRAPPC9-215ENST00000524162 CARD14Q9BXL6 1004 aa28.95■■■□□ 2.22
TRAPPC9-215ENST00000524162 BLMP54132 1417 aaPredicted RBP28.94■■■□□ 2.22
TRAPPC9-215ENST00000524162 SOX12O15370 315 aa28.94■■■□□ 2.22
TRAPPC9-215ENST00000524162 ZBTB7CA1YPR0 619 aa28.93■■■□□ 2.22
TRAPPC9-215ENST00000524162 WNK3Q9BYP7 1800 aa28.92■■■□□ 2.22
TRAPPC9-215ENST00000524162 A0A0G2JS52 829 aa28.91■■■□□ 2.22
TRAPPC9-215ENST00000524162 MYT1Q01538 1121 aa28.91■■■□□ 2.22
TRAPPC9-215ENST00000524162 CARD10Q9BWT7 1032 aa28.91■■■□□ 2.22
TRAPPC9-215ENST00000524162 NSD3Q9BZ95 1437 aa28.91■■■□□ 2.22
TRAPPC9-215ENST00000524162 FAM208AQ9UK61 1670 aaKnown RBP28.9■■■□□ 2.22
TRAPPC9-215ENST00000524162 TOM1L2Q6ZVM7 507 aa28.9■■■□□ 2.22
TRAPPC9-215ENST00000524162 CDCA7Q9BWT1 371 aaPredicted RBP28.9■■■□□ 2.22
TRAPPC9-215ENST00000524162 ERBB3P21860 1342 aa28.9■■■□□ 2.22
TRAPPC9-215ENST00000524162 IP6K1Q92551 441 aa28.89■■■□□ 2.22
TRAPPC9-215ENST00000524162 USP35Q9P2H5 1018 aa28.89■■■□□ 2.22
TRAPPC9-215ENST00000524162 CCDC7Q96M83 1385 aa28.88■■■□□ 2.21
TRAPPC9-215ENST00000524162 CGNL1Q0VF96 1302 aa28.88■■■□□ 2.21
TRAPPC9-215ENST00000524162 RTL1A6NKG5 1358 aa28.88■■■□□ 2.21
TRAPPC9-215ENST00000524162 KIF24Q5T7B8 1368 aa28.88■■■□□ 2.21
TRAPPC9-215ENST00000524162 GGNBP2Q9H3C7 697 aa28.87■■■□□ 2.21
TRAPPC9-215ENST00000524162 ANKRD26Q9UPS8 1709 aa28.86■■■□□ 2.21
TRAPPC9-215ENST00000524162 C11orf95C9JLR9 678 aaPredicted RBP28.85■■■□□ 2.21
TRAPPC9-215ENST00000524162 MAP3K19Q56UN5 1328 aa28.84■■■□□ 2.21
TRAPPC9-215ENST00000524162 CSB-PGBD3P0DP91 1061 aa28.83■■■□□ 2.21
TRAPPC9-215ENST00000524162 DISP2A7MBM2 1401 aa28.82■■■□□ 2.2
TRAPPC9-215ENST00000524162 RGPD1P0DJD0 1748 aa28.82■■■□□ 2.2
TRAPPC9-215ENST00000524162 LRRC37A3O60309 1634 aa28.81■■■□□ 2.2
TRAPPC9-215ENST00000524162 FAM196AQ6ZSG2 479 aa28.81■■■□□ 2.2
TRAPPC9-215ENST00000524162 NSD2O96028 1365 aa28.8■■■□□ 2.2
TRAPPC9-215ENST00000524162 PDE3BQ13370 1112 aa28.8■■■□□ 2.2
TRAPPC9-215ENST00000524162 ANKRD24Q8TF21 1146 aa28.8■■■□□ 2.2
TRAPPC9-215ENST00000524162 POLR3GLQ9BT43 218 aa28.8■■■□□ 2.2
TRAPPC9-215ENST00000524162 KIF7Q2M1P5 1343 aa28.79■■■□□ 2.2
TRAPPC9-215ENST00000524162 HOXC9P31274 260 aa28.79■■■□□ 2.2
TRAPPC9-215ENST00000524162 PANK3Q9H999 370 aa28.79■■■□□ 2.2
TRAPPC9-215ENST00000524162 AMPHP49418 695 aa28.77■■■□□ 2.2
TRAPPC9-215ENST00000524162 MAP2P11137 1827 aaKnown RBP28.76■■■□□ 2.19
TRAPPC9-215ENST00000524162 PEAK1Q9H792 1746 aa28.75■■■□□ 2.19
TRAPPC9-215ENST00000524162 SF3B2Q13435 895 aaKnown RBP28.75■■■□□ 2.19
TRAPPC9-215ENST00000524162 DDB1Q16531 1140 aa28.75■■■□□ 2.19
TRAPPC9-215ENST00000524162 BCL9O00512 1426 aa28.75■■■□□ 2.19
TRAPPC9-215ENST00000524162 INSRP06213 1382 aa28.74■■■□□ 2.19
TRAPPC9-215ENST00000524162 FLT4P35916 1363 aa28.74■■■□□ 2.19
TRAPPC9-215ENST00000524162 TNS1Q9HBL0 1735 aaKnown RBP28.73■■■□□ 2.19
TRAPPC9-215ENST00000524162 NLRP2Q9NX02 1062 aa28.73■■■□□ 2.19
TRAPPC9-215ENST00000524162 OVOS2A0A0G2JMS6 1433 aa28.72■■■□□ 2.19
TRAPPC9-215ENST00000524162 FBLN1P23142 703 aa28.72■■■□□ 2.19
TRAPPC9-215ENST00000524162 RRS1Q15050 365 aaKnown RBP28.72■■■□□ 2.19
TRAPPC9-215ENST00000524162 SBF2Q86WG5 1849 aa28.7■■■□□ 2.18
TRAPPC9-215ENST00000524162 TNS2Q63HR2 1409 aa28.69■■■□□ 2.18
TRAPPC9-215ENST00000524162 SMG6Q86US8 1419 aaKnown RBP28.69■■■□□ 2.18
TRAPPC9-215ENST00000524162 IL2RBP14784 551 aa28.69■■■□□ 2.18
TRAPPC9-215ENST00000524162 EXOC5O00471 708 aa28.68■■■□□ 2.18
TRAPPC9-215ENST00000524162 FAM182BQ5T319 152 aa28.68■■■□□ 2.18
TRAPPC9-215ENST00000524162 RGPD2P0DJD1 1756 aa28.67■■■□□ 2.18
TRAPPC9-215ENST00000524162 KNSTRNQ9Y448 316 aa28.67■■■□□ 2.18
TRAPPC9-215ENST00000524162 BAG6P46379 1132 aa28.66■■■□□ 2.18
TRAPPC9-215ENST00000524162 WASHC2AQ641Q2 1341 aa28.65■■■□□ 2.18
TRAPPC9-215ENST00000524162 HSP90AB2PQ58FF8 381 aa28.63■■■□□ 2.17
TRAPPC9-215ENST00000524162 PARD3Q8TEW0 1356 aa28.62■■■□□ 2.17
TRAPPC9-215ENST00000524162 PER1O15534 1290 aaPredicted RBP28.62■■■□□ 2.17
TRAPPC9-215ENST00000524162 MARCH10Q8NA82 808 aaPredicted RBP28.62■■■□□ 2.17
TRAPPC9-215ENST00000524162 LTV1Q96GA3 475 aaPredicted RBP28.62■■■□□ 2.17
TRAPPC9-215ENST00000524162 POLKQ9UBT6 870 aa28.62■■■□□ 2.17
TRAPPC9-215ENST00000524162 AMER1Q5JTC6 1135 aaPredicted RBP28.61■■■□□ 2.17
TRAPPC9-215ENST00000524162 EMILIN1Q9Y6C2 1016 aa28.61■■■□□ 2.17
TRAPPC9-215ENST00000524162 TRIM37O94972 964 aa28.6■■■□□ 2.17
TRAPPC9-215ENST00000524162 DEFB132Q7Z7B7 95 aa28.6■■■□□ 2.17
TRAPPC9-215ENST00000524162 NPC1L1Q9UHC9 1359 aa28.6■■■□□ 2.17
TRAPPC9-215ENST00000524162 RGPD3A6NKT7 1758 aaPredicted RBP28.6■■■□□ 2.17
TRAPPC9-215ENST00000524162 RGPD4Q7Z3J3 1758 aa28.6■■■□□ 2.17
TRAPPC9-215ENST00000524162 NCAPD2Q15021 1401 aa28.59■■■□□ 2.17
TRAPPC9-215ENST00000524162 NBPF6Q5VWK0 638 aa28.58■■■□□ 2.17
TRAPPC9-215ENST00000524162 NBPF4Q96M43 638 aa28.58■■■□□ 2.17
TRAPPC9-215ENST00000524162 MORC1Q86VD1 984 aa28.55■■■□□ 2.16
TRAPPC9-215ENST00000524162 PLEKHG2Q9H7P9 1386 aa28.54■■■□□ 2.16
TRAPPC9-215ENST00000524162 BCL11BQ9C0K0 894 aaPredicted RBP28.54■■■□□ 2.16
TRAPPC9-215ENST00000524162 CAMKK2Q96RR4 588 aa28.53■■■□□ 2.16
TRAPPC9-215ENST00000524162 SHANK3Q9BYB0 1731 aa28.52■■■□□ 2.16
TRAPPC9-215ENST00000524162 APBA3O96018 575 aa28.52■■■□□ 2.16
TRAPPC9-215ENST00000524162 MEGF6O75095 1541 aa28.52■■■□□ 2.16
TRAPPC9-215ENST00000524162 NHSQ6T4R5 1651 aa28.51■■■□□ 2.16
TRAPPC9-215ENST00000524162 KAT6BQ8WYB5 2073 aa28.51■■■□□ 2.15
TRAPPC9-215ENST00000524162 PPM1GO15355 546 aaPredicted RBP28.51■■■□□ 2.15
TRAPPC9-215ENST00000524162 EN1Q05925 392 aaPredicted RBP28.51■■■□□ 2.15
TRAPPC9-215ENST00000524162 RREB1Q92766 1687 aa28.51■■■□□ 2.15
TRAPPC9-215ENST00000524162 PLSCR1O15162 318 aa28.5■■■□□ 2.15
TRAPPC9-215ENST00000524162 RAPGEF4Q8WZA2 1011 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms