RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
LAMA4-220ENST00000523765 TOPAZ1Q8N9V7 1692 aa14.49□□□□□ -0.09
LAMA4-220ENST00000523765 MPHOSPH9Q99550 1183 aa14.48□□□□□ -0.09
LAMA4-220ENST00000523765 COL5A2P05997 1499 aaPredicted RBP14.48□□□□□ -0.09
LAMA4-220ENST00000523765 OVOS2A0A0G2JMS6 1433 aa14.48□□□□□ -0.09
LAMA4-220ENST00000523765 OVOS2A0A0J9YW53 1432 aa14.48□□□□□ -0.09
LAMA4-220ENST00000523765 OVOS2Q6IE36 1432 aa14.48□□□□□ -0.09
LAMA4-220ENST00000523765 ARHGEF28Q8N1W1 1705 aaKnown RBP14.47□□□□□ -0.09
LAMA4-220ENST00000523765 PLSCR1O15162 318 aa14.47□□□□□ -0.09
LAMA4-220ENST00000523765 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
LAMA4-220ENST00000523765 SGIP1Q9BQI5 828 aa14.47□□□□□ -0.09
LAMA4-220ENST00000523765 BCL11BQ9C0K0 894 aaPredicted RBP14.46□□□□□ -0.09
LAMA4-220ENST00000523765 AKAP12Q02952 1782 aa14.45□□□□□ -0.1
LAMA4-220ENST00000523765 POLA2Q14181 598 aa14.45□□□□□ -0.1
LAMA4-220ENST00000523765 NUDT16Q96DE0 195 aaKnown RBP14.45□□□□□ -0.1
LAMA4-220ENST00000523765 SHANK3Q9BYB0 1731 aa14.45□□□□□ -0.1
LAMA4-220ENST00000523765 EIF3AQ14152 1382 aaKnown RBP14.45□□□□□ -0.1
LAMA4-220ENST00000523765 CPDO75976 1380 aa14.44□□□□□ -0.1
LAMA4-220ENST00000523765 MARCH10Q8NA82 808 aaPredicted RBP14.43□□□□□ -0.1
LAMA4-220ENST00000523765 THRAP3Q9Y2W1 955 aaKnown RBP14.43□□□□□ -0.1
LAMA4-220ENST00000523765 USP19O94966 1318 aa14.42□□□□□ -0.1
LAMA4-220ENST00000523765 ACEP12821 1306 aa14.42□□□□□ -0.1
LAMA4-220ENST00000523765 COL18A1P39060 1754 aa14.42□□□□□ -0.1
LAMA4-220ENST00000523765 CRB1P82279 1406 aa14.42□□□□□ -0.1
LAMA4-220ENST00000523765 POLR3AO14802 1390 aaPredicted RBP14.42□□□□□ -0.1
LAMA4-220ENST00000523765 SLC15A2Q16348 729 aa14.41□□□□□ -0.1
LAMA4-220ENST00000523765 TXNRD1Q16881 649 aa14.41□□□□□ -0.1
LAMA4-220ENST00000523765 RGPD5Q99666 1765 aa14.41□□□□□ -0.1
LAMA4-220ENST00000523765 PAPPAQ13219 1627 aa14.41□□□□□ -0.1
LAMA4-220ENST00000523765 ABTB2Q8N961 1025 aa14.4□□□□□ -0.1
LAMA4-220ENST00000523765 ZBTB7CA1YPR0 619 aa14.39□□□□□ -0.11
LAMA4-220ENST00000523765 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
LAMA4-220ENST00000523765 DDB1Q16531 1140 aa14.39□□□□□ -0.11
LAMA4-220ENST00000523765 GCP02774 474 aa14.38□□□□□ -0.11
LAMA4-220ENST00000523765 CDK19Q9BWU1 502 aa14.38□□□□□ -0.11
LAMA4-220ENST00000523765 MTFR1LQ9H019 292 aa14.38□□□□□ -0.11
LAMA4-220ENST00000523765 STK32BQ9NY57 414 aa14.38□□□□□ -0.11
LAMA4-220ENST00000523765 ARXQ96QS3 562 aa14.37□□□□□ -0.11
LAMA4-220ENST00000523765 KDM2AQ9Y2K7 1162 aa14.36□□□□□ -0.11
LAMA4-220ENST00000523765 AXIN2Q9Y2T1 843 aa14.36□□□□□ -0.11
LAMA4-220ENST00000523765 NHSQ6T4R5 1651 aa14.36□□□□□ -0.11
LAMA4-220ENST00000523765 C11orf95C9JLR9 678 aaPredicted RBP14.35□□□□□ -0.11
LAMA4-220ENST00000523765 SLIT3O75094 1523 aa14.35□□□□□ -0.11
LAMA4-220ENST00000523765 COL24A1Q17RW2 1714 aa14.35□□□□□ -0.11
LAMA4-220ENST00000523765 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
LAMA4-220ENST00000523765 BCL9O00512 1426 aa14.34□□□□□ -0.11
LAMA4-220ENST00000523765 GPR162Q16538 588 aa14.34□□□□□ -0.11
LAMA4-220ENST00000523765 ZNF827Q17R98 1081 aa14.34□□□□□ -0.11
LAMA4-220ENST00000523765 TUBGCP6Q96RT7 1819 aa14.34□□□□□ -0.11
LAMA4-220ENST00000523765 PIK3C2AO00443 1686 aa14.33□□□□□ -0.11
LAMA4-220ENST00000523765 PLEKHG3A1L390 1219 aa14.33□□□□□ -0.12
LAMA4-220ENST00000523765 TOM1L2Q6ZVM7 507 aa14.33□□□□□ -0.12
LAMA4-220ENST00000523765 AATKQ6ZMQ8 1374 aa14.33□□□□□ -0.12
LAMA4-220ENST00000523765 BTAF1O14981 1849 aa14.32□□□□□ -0.12
LAMA4-220ENST00000523765 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
LAMA4-220ENST00000523765 PELP1Q8IZL8 1130 aaKnown RBP14.31□□□□□ -0.12
LAMA4-220ENST00000523765 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
LAMA4-220ENST00000523765 NLGN2Q8NFZ4 835 aa14.31□□□□□ -0.12
LAMA4-220ENST00000523765 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
LAMA4-220ENST00000523765 DCAF11Q8TEB1 546 aa14.3□□□□□ -0.12
LAMA4-220ENST00000523765 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
LAMA4-220ENST00000523765 WDR17Q8IZU2 1322 aa14.3□□□□□ -0.12
LAMA4-220ENST00000523765 LRRC4BQ9NT99 713 aa14.29□□□□□ -0.12
LAMA4-220ENST00000523765 PPIP5K1Q6PFW1 1433 aa14.29□□□□□ -0.12
LAMA4-220ENST00000523765 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
LAMA4-220ENST00000523765 YBX3P16989 372 aaKnown RBP eCLIP14.28□□□□□ -0.12
LAMA4-220ENST00000523765 TRPM1Q7Z4N2 1603 aa14.27□□□□□ -0.12
LAMA4-220ENST00000523765 CPSF1Q10570 1443 aaKnown RBP14.26□□□□□ -0.13
LAMA4-220ENST00000523765 TNS2Q63HR2 1409 aa14.26□□□□□ -0.13
LAMA4-220ENST00000523765 NLRP6P59044 892 aa14.26□□□□□ -0.13
LAMA4-220ENST00000523765 USP6P35125 1406 aa14.25□□□□□ -0.13
LAMA4-220ENST00000523765 ATP10DQ9P241 1426 aa14.25□□□□□ -0.13
LAMA4-220ENST00000523765 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
LAMA4-220ENST00000523765 EXOC5O00471 708 aa14.24□□□□□ -0.13
LAMA4-220ENST00000523765 PNPLA7Q6ZV29 1317 aa14.23□□□□□ -0.13
LAMA4-220ENST00000523765 SOX12O15370 315 aa14.23□□□□□ -0.13
LAMA4-220ENST00000523765 KCNQ4P56696 695 aa14.23□□□□□ -0.13
LAMA4-220ENST00000523765 ARHGEF25Q86VW2 580 aa14.23□□□□□ -0.13
LAMA4-220ENST00000523765 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
LAMA4-220ENST00000523765 CARD10Q9BWT7 1032 aa14.23□□□□□ -0.13
LAMA4-220ENST00000523765 ABCC6O95255 1503 aa14.23□□□□□ -0.13
LAMA4-220ENST00000523765 QRICH2Q9H0J4 1663 aa14.23□□□□□ -0.13
LAMA4-220ENST00000523765 NFAT5O94916 1531 aa14.22□□□□□ -0.13
LAMA4-220ENST00000523765 CDCA7Q9BWT1 371 aaPredicted RBP14.22□□□□□ -0.13
LAMA4-220ENST00000523765 SRPK2P78362 688 aaKnown RBP14.21□□□□□ -0.13
LAMA4-220ENST00000523765 CABP1Q9NZU7 370 aa14.21□□□□□ -0.13
LAMA4-220ENST00000523765 CSB-PGBD3P0DP91 1061 aa14.2□□□□□ -0.14
LAMA4-220ENST00000523765 HSPA6P17066 643 aa14.2□□□□□ -0.14
LAMA4-220ENST00000523765 NBPF1Q3BBV0 1214 aa14.2□□□□□ -0.14
LAMA4-220ENST00000523765 BRD4O60885 1362 aaPredicted RBP14.2□□□□□ -0.14
LAMA4-220ENST00000523765 KIAA1210Q9ULL0 1709 aa14.19□□□□□ -0.14
LAMA4-220ENST00000523765 ZNF526Q8TF50 670 aaPredicted RBP14.19□□□□□ -0.14
LAMA4-220ENST00000523765 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
LAMA4-220ENST00000523765 ADCY9O60503 1353 aa14.18□□□□□ -0.14
LAMA4-220ENST00000523765 LY75O60449 1722 aa14.18□□□□□ -0.14
LAMA4-220ENST00000523765 POLD1P28340 1107 aa14.17□□□□□ -0.14
LAMA4-220ENST00000523765 CCDC7Q96M83 1385 aa14.17□□□□□ -0.14
LAMA4-220ENST00000523765 LTN1O94822 1766 aa14.17□□□□□ -0.14
LAMA4-220ENST00000523765 SLC16A10Q8TF71 515 aa14.16□□□□□ -0.14
LAMA4-220ENST00000523765 DOT1LQ8TEK3 1739 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms