RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 PTK2Q05397 1052 aa9.85□□□□□ -0.83
SREK1-213ENST00000523655 LCE2AQ5TA79 106 aaPredicted RBP9.85□□□□□ -0.83
SREK1-213ENST00000523655 KCTD15Q96SI1 283 aaPredicted RBP9.85□□□□□ -0.83
SREK1-213ENST00000523655 SNRKQ9NRH2 765 aa9.85□□□□□ -0.83
SREK1-213ENST00000523655 VEGFBP49765 207 aa9.84□□□□□ -0.83
SREK1-213ENST00000523655 CBLBQ13191 982 aa9.84□□□□□ -0.83
SREK1-213ENST00000523655 TREML4Q6UXN2 200 aa9.84□□□□□ -0.83
SREK1-213ENST00000523655 CCDC116Q8IYX3 515 aa9.84□□□□□ -0.83
SREK1-213ENST00000523655 KIFC2Q96AC6 838 aa9.84□□□□□ -0.83
SREK1-213ENST00000523655 SLC10A4Q96EP9 437 aa9.84□□□□□ -0.83
SREK1-213ENST00000523655 NFX1Q12986 1120 aaKnown RBP9.83□□□□□ -0.84
SREK1-213ENST00000523655 PPP1R26Q5T8A7 1209 aaPredicted RBP9.83□□□□□ -0.84
SREK1-213ENST00000523655 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
SREK1-213ENST00000523655 INTS6LQ5JSJ4 861 aaKnown RBP9.81□□□□□ -0.84
SREK1-213ENST00000523655 MTMR14Q8NCE2 650 aa9.81□□□□□ -0.84
SREK1-213ENST00000523655 TMPRSS4Q9NRS4 437 aa9.81□□□□□ -0.84
SREK1-213ENST00000523655 WFS1O76024 890 aa9.8□□□□□ -0.84
SREK1-213ENST00000523655 SCARF1Q14162 830 aa9.8□□□□□ -0.84
SREK1-213ENST00000523655 MEIOBQ8N635 442 aa9.8□□□□□ -0.84
SREK1-213ENST00000523655 TERTO14746 1132 aaKnown RBP9.79□□□□□ -0.84
SREK1-213ENST00000523655 GPR37L1O60883 481 aa9.79□□□□□ -0.84
SREK1-213ENST00000523655 FBXO45P0C2W1 286 aa9.79□□□□□ -0.84
SREK1-213ENST00000523655 BMP2P12643 396 aa9.79□□□□□ -0.84
SREK1-213ENST00000523655 AGBL1Q96MI9 1066 aa9.79□□□□□ -0.84
SREK1-213ENST00000523655 GPSM3Q9Y4H4 160 aa9.79□□□□□ -0.84
SREK1-213ENST00000523655 EMILIN1Q9Y6C2 1016 aa9.79□□□□□ -0.84
SREK1-213ENST00000523655 DZIP3Q86Y13 1208 aaKnown RBP9.78□□□□□ -0.84
SREK1-213ENST00000523655 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
SREK1-213ENST00000523655 PNMA1Q8ND90 353 aa9.76□□□□□ -0.85
SREK1-213ENST00000523655 ZBBXA8MT70 800 aa9.75□□□□□ -0.85
SREK1-213ENST00000523655 PCDHB9Q9Y5E1 797 aa9.75□□□□□ -0.85
SREK1-213ENST00000523655 ERVH48-1M5A8F1 160 aa9.74□□□□□ -0.85
SREK1-213ENST00000523655 GIGYF1O75420 1035 aaPredicted RBP9.74□□□□□ -0.85
SREK1-213ENST00000523655 ADD1P35611 737 aaKnown RBP9.74□□□□□ -0.85
SREK1-213ENST00000523655 ZNF784Q8NCA9 323 aaPredicted RBP9.74□□□□□ -0.85
SREK1-213ENST00000523655 BANK1Q8NDB2 785 aa9.74□□□□□ -0.85
SREK1-213ENST00000523655 FIGNL2A6NMB9 653 aa9.73□□□□□ -0.85
SREK1-213ENST00000523655 MAN1A2O60476 641 aa9.73□□□□□ -0.85
SREK1-213ENST00000523655 PGPEP1Q9NXJ5 209 aa9.73□□□□□ -0.85
SREK1-213ENST00000523655 NXF1Q9UBU9 619 aaKnown RBP9.73□□□□□ -0.85
SREK1-213ENST00000523655 DNMT3LQ9UJW3 386 aa9.73□□□□□ -0.85
SREK1-213ENST00000523655 CDV3Q9UKY7 258 aaKnown RBP9.73□□□□□ -0.85
SREK1-213ENST00000523655 UPP2O95045 317 aa9.72□□□□□ -0.85
SREK1-213ENST00000523655 RELBQ01201 579 aa9.72□□□□□ -0.85
SREK1-213ENST00000523655 Q6ZVU0 165 aa9.72□□□□□ -0.85
SREK1-213ENST00000523655 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
SREK1-213ENST00000523655 ESPNB1AK53 854 aa9.71□□□□□ -0.86
SREK1-213ENST00000523655 NBPF20Q3BBV1 942 aa9.71□□□□□ -0.86
SREK1-213ENST00000523655 TSEN34Q9BSV6 310 aaKnown RBP9.71□□□□□ -0.86
SREK1-213ENST00000523655 ZNF395Q9H8N7 513 aaPredicted RBP9.71□□□□□ -0.86
SREK1-213ENST00000523655 TBC1D2BQ9UPU7 963 aa9.71□□□□□ -0.86
SREK1-213ENST00000523655 LILRA1O75019 489 aa9.7□□□□□ -0.86
SREK1-213ENST00000523655 CYLDQ9NQC7 956 aa9.7□□□□□ -0.86
SREK1-213ENST00000523655 ERBB4Q15303 1308 aa9.7□□□□□ -0.86
SREK1-213ENST00000523655 DHX9Q08211 1270 aaKnown RBP9.69□□□□□ -0.86
SREK1-213ENST00000523655 KDF1Q8NAX2 398 aaPredicted RBP9.69□□□□□ -0.86
SREK1-213ENST00000523655 NDUFB9Q9Y6M9 179 aa9.69□□□□□ -0.86
SREK1-213ENST00000523655 CTSOP43234 321 aaPredicted RBP9.68□□□□□ -0.86
SREK1-213ENST00000523655 NR1H3Q13133 447 aa9.68□□□□□ -0.86
SREK1-213ENST00000523655 INSM2Q96T92 566 aaPredicted RBP9.68□□□□□ -0.86
SREK1-213ENST00000523655 TTLL8A6PVC2 850 aa9.67□□□□□ -0.86
SREK1-213ENST00000523655 H3BM21 787 aa9.66□□□□□ -0.86
SREK1-213ENST00000523655 SPINT1O43278 529 aa9.66□□□□□ -0.86
SREK1-213ENST00000523655 GMPRP36959 345 aa9.66□□□□□ -0.86
SREK1-213ENST00000523655 IRF5Q13568 498 aa9.65□□□□□ -0.86
SREK1-213ENST00000523655 SLC16A10Q8TF71 515 aa9.64□□□□□ -0.87
SREK1-213ENST00000523655 ADH1AP07327 375 aa9.63□□□□□ -0.87
SREK1-213ENST00000523655 SCTRP47872 440 aa9.63□□□□□ -0.87
SREK1-213ENST00000523655 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
SREK1-213ENST00000523655 POLMQ9NP87 494 aaPredicted RBP9.63□□□□□ -0.87
SREK1-213ENST00000523655 PPFIA3O75145 1194 aa9.62□□□□□ -0.87
SREK1-213ENST00000523655 WIPF1O43516 503 aa9.61□□□□□ -0.87
SREK1-213ENST00000523655 PTGIRP43119 386 aa9.61□□□□□ -0.87
SREK1-213ENST00000523655 PTSQ03393 145 aa9.61□□□□□ -0.87
SREK1-213ENST00000523655 TSGA10IPQ3SY00 556 aa9.61□□□□□ -0.87
SREK1-213ENST00000523655 SOCS7O14512 581 aa9.6□□□□□ -0.87
SREK1-213ENST00000523655 ABL2P42684 1182 aa9.6□□□□□ -0.87
SREK1-213ENST00000523655 VAC14Q08AM6 782 aa9.6□□□□□ -0.87
SREK1-213ENST00000523655 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
SREK1-213ENST00000523655 SEPT12Q8IYM1 358 aa9.6□□□□□ -0.87
SREK1-213ENST00000523655 CDCA7Q9BWT1 371 aaPredicted RBP9.6□□□□□ -0.87
SREK1-213ENST00000523655 PCDHB11Q9Y5F2 797 aa9.6□□□□□ -0.87
SREK1-213ENST00000523655 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.59□□□□□ -0.87
SREK1-213ENST00000523655 IRF7Q92985 503 aa9.59□□□□□ -0.87
SREK1-213ENST00000523655 MCM6Q14566 821 aa9.58□□□□□ -0.88
SREK1-213ENST00000523655 NPAS3Q8IXF0 933 aa9.58□□□□□ -0.88
SREK1-213ENST00000523655 RNF217Q8TC41 542 aa9.58□□□□□ -0.88
SREK1-213ENST00000523655 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
SREK1-213ENST00000523655 CEP126Q9P2H0 1117 aa9.58□□□□□ -0.88
SREK1-213ENST00000523655 GPR161Q8N6U8 529 aaKnown RBP9.57□□□□□ -0.88
SREK1-213ENST00000523655 APBB1O00213 710 aa9.56□□□□□ -0.88
SREK1-213ENST00000523655 MEN1O00255 615 aa9.56□□□□□ -0.88
SREK1-213ENST00000523655 ATP5J2-PTCD1G3V325 749 aa9.55□□□□□ -0.88
SREK1-213ENST00000523655 RHOQP17081 205 aa9.55□□□□□ -0.88
SREK1-213ENST00000523655 LORP23490 312 aaPredicted RBP9.55□□□□□ -0.88
SREK1-213ENST00000523655 ERVK-9P63128 1117 aa9.55□□□□□ -0.88
SREK1-213ENST00000523655 CC2D2BQ6DHV5 1058 aa9.55□□□□□ -0.88
SREK1-213ENST00000523655 PRICKLE2Q7Z3G6 844 aa9.55□□□□□ -0.88
SREK1-213ENST00000523655 CCDC155Q8N6L0 562 aa9.55□□□□□ -0.88
SREK1-213ENST00000523655 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms