RNA–Protein interactions for RNA: ENST00000523465.1

POLB-214, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-214ENST00000523465 RAPGEF3O95398 923 aa11.33□□□□□ -0.6
POLB-214ENST00000523465 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
POLB-214ENST00000523465 ARAP3Q8WWN8 1544 aa11.33□□□□□ -0.6
POLB-214ENST00000523465 A6NJR5 290 aa11.32□□□□□ -0.6
POLB-214ENST00000523465 PER1O15534 1290 aaPredicted RBP11.32□□□□□ -0.6
POLB-214ENST00000523465 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
POLB-214ENST00000523465 MMP16P51512 607 aa11.31□□□□□ -0.6
POLB-214ENST00000523465 KCNC4Q03721 635 aa11.31□□□□□ -0.6
POLB-214ENST00000523465 PTPRNQ16849 979 aa11.31□□□□□ -0.6
POLB-214ENST00000523465 SLC6A16Q9GZN6 736 aa11.31□□□□□ -0.6
POLB-214ENST00000523465 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
POLB-214ENST00000523465 CLUAP1Q96AJ1 413 aa11.3□□□□□ -0.6
POLB-214ENST00000523465 HMX1Q9NP08 348 aaPredicted RBP11.3□□□□□ -0.6
POLB-214ENST00000523465 ARID4BQ4LE39 1312 aaPredicted RBP11.3□□□□□ -0.6
POLB-214ENST00000523465 ADAMTSL3P82987 1691 aa11.3□□□□□ -0.6
POLB-214ENST00000523465 FRMPD1Q5SYB0 1578 aa11.29□□□□□ -0.6
POLB-214ENST00000523465 FHOD3Q2V2M9 1422 aa11.29□□□□□ -0.6
POLB-214ENST00000523465 GJD4Q96KN9 370 aaPredicted RBP11.29□□□□□ -0.6
POLB-214ENST00000523465 COG6Q9Y2V7 657 aa11.29□□□□□ -0.6
POLB-214ENST00000523465 NDUFB9Q9Y6M9 179 aa11.29□□□□□ -0.6
POLB-214ENST00000523465 PTPRMP28827 1452 aa11.29□□□□□ -0.6
POLB-214ENST00000523465 POM121Q96HA1 1249 aa11.28□□□□□ -0.6
POLB-214ENST00000523465 PRDM9Q9NQV7 894 aa11.28□□□□□ -0.6
POLB-214ENST00000523465 BCORL1Q5H9F3 1711 aa11.28□□□□□ -0.6
POLB-214ENST00000523465 MADDQ8WXG6 1647 aa11.27□□□□□ -0.6
POLB-214ENST00000523465 NUP153P49790 1475 aaKnown RBP11.27□□□□□ -0.6
POLB-214ENST00000523465 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
POLB-214ENST00000523465 PNMA1Q8ND90 353 aa11.27□□□□□ -0.61
POLB-214ENST00000523465 NKX2-3Q8TAU0 364 aa11.27□□□□□ -0.61
POLB-214ENST00000523465 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
POLB-214ENST00000523465 NEO1Q92859 1461 aa11.26□□□□□ -0.61
POLB-214ENST00000523465 CCNYL3P0C7X3 344 aa11.26□□□□□ -0.61
POLB-214ENST00000523465 NUDT12Q9BQG2 462 aa11.26□□□□□ -0.61
POLB-214ENST00000523465 GDPD2Q9HCC8 539 aa11.26□□□□□ -0.61
POLB-214ENST00000523465 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
POLB-214ENST00000523465 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
POLB-214ENST00000523465 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
POLB-214ENST00000523465 PHLDB1Q86UU1 1377 aa11.25□□□□□ -0.61
POLB-214ENST00000523465 RICTORQ6R327 1708 aa11.24□□□□□ -0.61
POLB-214ENST00000523465 CTHP32929 405 aa11.24□□□□□ -0.61
POLB-214ENST00000523465 NR6A1Q15406 480 aa11.24□□□□□ -0.61
POLB-214ENST00000523465 EVA1BQ9NVM1 165 aa11.24□□□□□ -0.61
POLB-214ENST00000523465 PLEKHD1A6NEE1 506 aa11.23□□□□□ -0.61
POLB-214ENST00000523465 S1PR4O95977 384 aa11.23□□□□□ -0.61
POLB-214ENST00000523465 F12P00748 615 aaPredicted RBP11.23□□□□□ -0.61
POLB-214ENST00000523465 ABL2P42684 1182 aa11.23□□□□□ -0.61
POLB-214ENST00000523465 ARHGEF40Q8TER5 1519 aa11.23□□□□□ -0.61
POLB-214ENST00000523465 TRAK2O60296 914 aa11.22□□□□□ -0.61
POLB-214ENST00000523465 DENND4BO75064 1496 aaPredicted RBP11.22□□□□□ -0.61
POLB-214ENST00000523465 GGCXP38435 758 aa11.22□□□□□ -0.61
POLB-214ENST00000523465 KCNH2Q12809 1159 aa11.22□□□□□ -0.61
POLB-214ENST00000523465 TTC37Q6PGP7 1564 aa11.22□□□□□ -0.61
POLB-214ENST00000523465 EPS8L1Q8TE68 723 aa11.22□□□□□ -0.61
POLB-214ENST00000523465 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.22□□□□□ -0.61
POLB-214ENST00000523465 PCF11O94913 1555 aaKnown RBP11.21□□□□□ -0.61
POLB-214ENST00000523465 CFAP74Q9C0B2 1584 aa11.21□□□□□ -0.61
POLB-214ENST00000523465 AKNAQ7Z591 1439 aa11.21□□□□□ -0.61
POLB-214ENST00000523465 SIGLEC1Q9BZZ2 1709 aa11.21□□□□□ -0.62
POLB-214ENST00000523465 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
POLB-214ENST00000523465 FANCAO15360 1455 aa11.2□□□□□ -0.62
POLB-214ENST00000523465 MLECQ14165 292 aa11.2□□□□□ -0.62
POLB-214ENST00000523465 FNBP4Q8N3X1 1017 aaPredicted RBP11.2□□□□□ -0.62
POLB-214ENST00000523465 CCDC24Q8N4L8 307 aa11.2□□□□□ -0.62
POLB-214ENST00000523465 FBXO41Q8TF61 875 aa11.2□□□□□ -0.62
POLB-214ENST00000523465 MAP10Q9P2G4 905 aa11.2□□□□□ -0.62
POLB-214ENST00000523465 ARMC2Q8NEN0 867 aa11.19□□□□□ -0.62
POLB-214ENST00000523465 LMTK3Q96Q04 1460 aa11.19□□□□□ -0.62
POLB-214ENST00000523465 EEA1Q15075 1411 aa11.18□□□□□ -0.62
POLB-214ENST00000523465 FKBPLQ9UIM3 349 aa11.18□□□□□ -0.62
POLB-214ENST00000523465 ZFYVE16Q7Z3T8 1539 aa11.18□□□□□ -0.62
POLB-214ENST00000523465 YEATS2Q9ULM3 1422 aa11.18□□□□□ -0.62
POLB-214ENST00000523465 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
POLB-214ENST00000523465 HSPA2P54652 639 aa11.17□□□□□ -0.62
POLB-214ENST00000523465 WASHC4Q2M389 1173 aa11.17□□□□□ -0.62
POLB-214ENST00000523465 FCF1Q9Y324 198 aaKnown RBP11.17□□□□□ -0.62
POLB-214ENST00000523465 ZNF330Q9Y3S2 320 aaPredicted RBP11.17□□□□□ -0.62
POLB-214ENST00000523465 EFCAB5A4FU69 1503 aa11.17□□□□□ -0.62
POLB-214ENST00000523465 FER1L4A9Z1Z3 1794 aa11.16□□□□□ -0.62
POLB-214ENST00000523465 HECW1Q76N89 1606 aa11.16□□□□□ -0.62
POLB-214ENST00000523465 IRF5Q13568 498 aa11.15□□□□□ -0.62
POLB-214ENST00000523465 ZMYM4Q5VZL5 1548 aa11.14□□□□□ -0.63
POLB-214ENST00000523465 GPR37L1O60883 481 aa11.14□□□□□ -0.63
POLB-214ENST00000523465 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
POLB-214ENST00000523465 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
POLB-214ENST00000523465 UNC93B1Q9H1C4 597 aa11.14□□□□□ -0.63
POLB-214ENST00000523465 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
POLB-214ENST00000523465 MYO5CQ9NQX4 1742 aa11.13□□□□□ -0.63
POLB-214ENST00000523465 SCAPERQ9BY12 1400 aa11.13□□□□□ -0.63
POLB-214ENST00000523465 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
POLB-214ENST00000523465 NBPF14Q5TI25 921 aa11.13□□□□□ -0.63
POLB-214ENST00000523465 PPP1R18Q6NYC8 613 aa11.13□□□□□ -0.63
POLB-214ENST00000523465 ANKLE1Q8NAG6 615 aa11.13□□□□□ -0.63
POLB-214ENST00000523465 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.13□□□□□ -0.63
POLB-214ENST00000523465 PPEF1O14829 653 aaPredicted RBP11.12□□□□□ -0.63
POLB-214ENST00000523465 PTCRAQ6ISU1 281 aaPredicted RBP11.12□□□□□ -0.63
POLB-214ENST00000523465 KIF14Q15058 1648 aa11.11□□□□□ -0.63
POLB-214ENST00000523465 ZBTB24O43167 697 aaPredicted RBP11.11□□□□□ -0.63
POLB-214ENST00000523465 ZNF777Q9ULD5 760 aaPredicted RBP11.11□□□□□ -0.63
POLB-214ENST00000523465 PLCH2O75038 1416 aa11.1□□□□□ -0.63
POLB-214ENST00000523465 PDXDC2PQ6P474 469 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms