RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 ERVK-7P63135 1459 aa6.07□□□□□ -1.44
NPM1-210ENST00000523339 TMEM2Q9UHN6 1383 aa6.06□□□□□ -1.44
NPM1-210ENST00000523339 CDC42BPAQ5VT25 1732 aa6.06□□□□□ -1.44
NPM1-210ENST00000523339 SPRYD3Q8NCJ5 442 aa6.06□□□□□ -1.44
NPM1-210ENST00000523339 TATDN2Q93075 761 aa6.06□□□□□ -1.44
NPM1-210ENST00000523339 NPDC1Q9NQX5 325 aaPredicted RBP6.06□□□□□ -1.44
NPM1-210ENST00000523339 NKTRP30414 1462 aaKnown RBP6.06□□□□□ -1.44
NPM1-210ENST00000523339 NCOA2Q15596 1464 aa6.06□□□□□ -1.44
NPM1-210ENST00000523339 CCDC141Q6ZP82 1450 aa6.05□□□□□ -1.44
NPM1-210ENST00000523339 SPDYE16A6NNV3 312 aaPredicted RBP6.05□□□□□ -1.44
NPM1-210ENST00000523339 PPP4CP60510 307 aa6.05□□□□□ -1.44
NPM1-210ENST00000523339 E2F4Q16254 413 aa6.05□□□□□ -1.44
NPM1-210ENST00000523339 NYAP1Q6ZVC0 841 aa6.05□□□□□ -1.44
NPM1-210ENST00000523339 C19orf44Q9H6X5 657 aa6.05□□□□□ -1.44
NPM1-210ENST00000523339 ABCC3O15438 1527 aa6.04□□□□□ -1.44
NPM1-210ENST00000523339 MAP3K1Q13233 1512 aa6.04□□□□□ -1.44
NPM1-210ENST00000523339 ZC3H13Q5T200 1668 aaKnown RBP6.04□□□□□ -1.44
NPM1-210ENST00000523339 COL16A1Q07092 1604 aaPredicted RBP6.04□□□□□ -1.44
NPM1-210ENST00000523339 MYT1Q01538 1121 aa6.04□□□□□ -1.44
NPM1-210ENST00000523339 BRINP3Q76B58 766 aa6.04□□□□□ -1.44
NPM1-210ENST00000523339 NKX2-3Q8TAU0 364 aa6.04□□□□□ -1.44
NPM1-210ENST00000523339 PNMA3Q9UL41 463 aa6.04□□□□□ -1.44
NPM1-210ENST00000523339 ARIH1Q9Y4X5 557 aaPredicted RBP6.04□□□□□ -1.44
NPM1-210ENST00000523339 KANK1Q14678 1352 aa6.04□□□□□ -1.44
NPM1-210ENST00000523339 SLIT1O75093 1534 aa6.04□□□□□ -1.44
NPM1-210ENST00000523339 TIAM1Q13009 1591 aa6.03□□□□□ -1.44
NPM1-210ENST00000523339 SENP3-EIF4A1A0A087X0R7 540 aa6.03□□□□□ -1.44
NPM1-210ENST00000523339 NUDT18Q6ZVK8 323 aa6.03□□□□□ -1.44
NPM1-210ENST00000523339 DEFB132Q7Z7B7 95 aa6.03□□□□□ -1.44
NPM1-210ENST00000523339 FYCO1Q9BQS8 1478 aa6.02□□□□□ -1.44
NPM1-210ENST00000523339 ARHGAP23Q9P227 1491 aa6.02□□□□□ -1.44
NPM1-210ENST00000523339 APLP1P51693 650 aa6.02□□□□□ -1.45
NPM1-210ENST00000523339 PPP1R18Q6NYC8 613 aa6.02□□□□□ -1.45
NPM1-210ENST00000523339 Q6ZNB5 142 aa6.02□□□□□ -1.45
NPM1-210ENST00000523339 PAXIP1Q6ZW49 1069 aaPredicted RBP6.02□□□□□ -1.45
NPM1-210ENST00000523339 TTC13Q8NBP0 860 aa6.02□□□□□ -1.45
NPM1-210ENST00000523339 MTRQ99707 1265 aa6.02□□□□□ -1.45
NPM1-210ENST00000523339 PPP1R1BQ9UD71 204 aaPredicted RBP6.02□□□□□ -1.45
NPM1-210ENST00000523339 EFCAB6Q5THR3 1501 aa6.02□□□□□ -1.45
NPM1-210ENST00000523339 MBD5Q9P267 1494 aa6.02□□□□□ -1.45
NPM1-210ENST00000523339 BLMP54132 1417 aaPredicted RBP6.01□□□□□ -1.45
NPM1-210ENST00000523339 GFRA3O60609 400 aa6.01□□□□□ -1.45
NPM1-210ENST00000523339 IDI1Q13907 227 aa6.01□□□□□ -1.45
NPM1-210ENST00000523339 CFAP44Q96MT7 982 aa6.01□□□□□ -1.45
NPM1-210ENST00000523339 CCDC9Q9Y3X0 531 aaKnown RBP6.01□□□□□ -1.45
NPM1-210ENST00000523339 UBR1Q8IWV7 1749 aa6.01□□□□□ -1.45
NPM1-210ENST00000523339 XIRP1Q702N8 1843 aaKnown RBP6.01□□□□□ -1.45
NPM1-210ENST00000523339 SHPRHQ149N8 1683 aa6.01□□□□□ -1.45
NPM1-210ENST00000523339 AHDC1Q5TGY3 1603 aaPredicted RBP6□□□□□ -1.45
NPM1-210ENST00000523339 HRCP23327 699 aa6□□□□□ -1.45
NPM1-210ENST00000523339 BAG6P46379 1132 aa6□□□□□ -1.45
NPM1-210ENST00000523339 DDX17Q92841 729 aaKnown RBP6□□□□□ -1.45
NPM1-210ENST00000523339 PRKD2Q9BZL6 878 aa6□□□□□ -1.45
NPM1-210ENST00000523339 NWD1Q149M9 1564 aa6□□□□□ -1.45
NPM1-210ENST00000523339 NCOA3Q9Y6Q9 1424 aa5.99□□□□□ -1.45
NPM1-210ENST00000523339 LRRIQ1Q96JM4 1722 aa5.99□□□□□ -1.45
NPM1-210ENST00000523339 CAMSAP2Q08AD1 1489 aa5.99□□□□□ -1.45
NPM1-210ENST00000523339 HAP1P54257 671 aaPredicted RBP5.99□□□□□ -1.45
NPM1-210ENST00000523339 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.99□□□□□ -1.45
NPM1-210ENST00000523339 AMOTL2Q9Y2J4 779 aa5.99□□□□□ -1.45
NPM1-210ENST00000523339 SETD5Q9C0A6 1442 aa5.99□□□□□ -1.45
NPM1-210ENST00000523339 KDM5AP29375 1690 aaKnown RBP5.98□□□□□ -1.45
NPM1-210ENST00000523339 PNPLA6Q8IY17 1366 aa5.98□□□□□ -1.45
NPM1-210ENST00000523339 R3HDM1Q15032 1099 aaKnown RBP5.98□□□□□ -1.45
NPM1-210ENST00000523339 SWT1Q5T5J6 900 aaKnown RBP5.98□□□□□ -1.45
NPM1-210ENST00000523339 GJD4Q96KN9 370 aaPredicted RBP5.98□□□□□ -1.45
NPM1-210ENST00000523339 IL21Q9HBE4 155 aa5.98□□□□□ -1.45
NPM1-210ENST00000523339 RRP7BPQ9NSQ0 103 aa5.98□□□□□ -1.45
NPM1-210ENST00000523339 SLC52A1Q9NWF4 448 aa5.98□□□□□ -1.45
NPM1-210ENST00000523339 TBX22Q9Y458 520 aa5.98□□□□□ -1.45
NPM1-210ENST00000523339 PLEKHG1Q9ULL1 1385 aa5.97□□□□□ -1.45
NPM1-210ENST00000523339 PIK3C2BO00750 1634 aa5.97□□□□□ -1.45
NPM1-210ENST00000523339 MLLT3P42568 568 aaPredicted RBP5.97□□□□□ -1.45
NPM1-210ENST00000523339 TRAF7Q6Q0C0 670 aa5.97□□□□□ -1.45
NPM1-210ENST00000523339 PADI6Q6TGC4 694 aa5.97□□□□□ -1.45
NPM1-210ENST00000523339 FNBP4Q8N3X1 1017 aaPredicted RBP5.97□□□□□ -1.45
NPM1-210ENST00000523339 EMID1Q96A84 441 aaPredicted RBP5.97□□□□□ -1.45
NPM1-210ENST00000523339 EYA1Q99502 592 aa5.97□□□□□ -1.45
NPM1-210ENST00000523339 RTN4Q9NQC3 1192 aaKnown RBP5.97□□□□□ -1.45
NPM1-210ENST00000523339 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.97□□□□□ -1.45
NPM1-210ENST00000523339 ASXL1Q8IXJ9 1541 aa5.97□□□□□ -1.45
NPM1-210ENST00000523339 WDR70Q9NW82 654 aa5.96□□□□□ -1.46
NPM1-210ENST00000523339 ARHGAP31Q2M1Z3 1444 aa5.96□□□□□ -1.46
NPM1-210ENST00000523339 RIMS2Q9UQ26 1411 aa5.96□□□□□ -1.46
NPM1-210ENST00000523339 EHBP1L1Q8N3D4 1523 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 TET3O43151 1660 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 ATRNO75882 1429 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 COPS2P61201 443 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 PTCH1Q13635 1447 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 CEP162Q5TB80 1403 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 KRT27Q7Z3Y8 459 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 SEPT12Q8IYM1 358 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 LRP5O75197 1615 aa5.95□□□□□ -1.46
NPM1-210ENST00000523339 KIF15Q9NS87 1388 aa5.94□□□□□ -1.46
NPM1-210ENST00000523339 DIP2AQ14689 1571 aa5.94□□□□□ -1.46
NPM1-210ENST00000523339 NBPF26B4DH59 902 aa5.94□□□□□ -1.46
NPM1-210ENST00000523339 TSHZ2Q9NRE2 1034 aa5.94□□□□□ -1.46
NPM1-210ENST00000523339 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.94□□□□□ -1.46
NPM1-210ENST00000523339 MROH1Q8NDA8 1641 aa5.94□□□□□ -1.46
NPM1-210ENST00000523339 EP400Q96L91 3159 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms