RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 TEX2Q8IWB9 1127 aa13.38□□□□□ -0.27
ERGIC1-211ENST00000523215 RTL1A6NKG5 1358 aa13.38□□□□□ -0.27
ERGIC1-211ENST00000523215 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
ERGIC1-211ENST00000523215 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
ERGIC1-211ENST00000523215 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
ERGIC1-211ENST00000523215 ISY1Q9ULR0 285 aaKnown RBP13.37□□□□□ -0.27
ERGIC1-211ENST00000523215 MST1RQ04912 1400 aa13.36□□□□□ -0.27
ERGIC1-211ENST00000523215 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
ERGIC1-211ENST00000523215 IPO4Q8TEX9 1081 aaKnown RBP13.36□□□□□ -0.27
ERGIC1-211ENST00000523215 ARHGAP45Q92619 1136 aa13.36□□□□□ -0.27
ERGIC1-211ENST00000523215 APAF1O14727 1248 aa13.36□□□□□ -0.27
ERGIC1-211ENST00000523215 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
ERGIC1-211ENST00000523215 RIMS2Q9UQ26 1411 aa13.36□□□□□ -0.27
ERGIC1-211ENST00000523215 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
ERGIC1-211ENST00000523215 VSIG10Q8N0Z9 540 aa13.35□□□□□ -0.27
ERGIC1-211ENST00000523215 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
ERGIC1-211ENST00000523215 USP31Q70CQ4 1352 aa13.35□□□□□ -0.27
ERGIC1-211ENST00000523215 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
ERGIC1-211ENST00000523215 FAM43AQ8N2R8 423 aa13.35□□□□□ -0.27
ERGIC1-211ENST00000523215 GLIPR1L2Q4G1C9 344 aa13.34□□□□□ -0.27
ERGIC1-211ENST00000523215 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
ERGIC1-211ENST00000523215 TMED8Q6PL24 325 aaPredicted RBP13.34□□□□□ -0.27
ERGIC1-211ENST00000523215 SLC12A5Q9H2X9 1139 aa13.34□□□□□ -0.27
ERGIC1-211ENST00000523215 ABCC4O15439 1325 aa13.34□□□□□ -0.27
ERGIC1-211ENST00000523215 RAPGEF3O95398 923 aa13.33□□□□□ -0.27
ERGIC1-211ENST00000523215 BCAR3O75815 825 aa13.33□□□□□ -0.28
ERGIC1-211ENST00000523215 TRAK1Q9UPV9 953 aa13.33□□□□□ -0.28
ERGIC1-211ENST00000523215 MVPQ14764 893 aaKnown RBP13.33□□□□□ -0.28
ERGIC1-211ENST00000523215 SECISBP2LQ93073 1101 aaKnown RBP13.33□□□□□ -0.28
ERGIC1-211ENST00000523215 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
ERGIC1-211ENST00000523215 KCNG1Q9UIX4 513 aa13.32□□□□□ -0.28
ERGIC1-211ENST00000523215 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
ERGIC1-211ENST00000523215 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
ERGIC1-211ENST00000523215 PCDHB15Q9Y5E8 787 aa13.32□□□□□ -0.28
ERGIC1-211ENST00000523215 IL27Q8NEV9 243 aa13.32□□□□□ -0.28
ERGIC1-211ENST00000523215 PARP4Q9UKK3 1724 aaKnown RBP13.32□□□□□ -0.28
ERGIC1-211ENST00000523215 RLBP1P12271 317 aa13.31□□□□□ -0.28
ERGIC1-211ENST00000523215 ZBTB40Q9NUA8 1239 aa13.31□□□□□ -0.28
ERGIC1-211ENST00000523215 KIF2CQ99661 725 aa13.31□□□□□ -0.28
ERGIC1-211ENST00000523215 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
ERGIC1-211ENST00000523215 GGT6Q6P531 493 aa13.3□□□□□ -0.28
ERGIC1-211ENST00000523215 CHMP4BQ9H444 224 aaKnown RBP13.3□□□□□ -0.28
ERGIC1-211ENST00000523215 MYH15Q9Y2K3 1946 aa13.3□□□□□ -0.28
ERGIC1-211ENST00000523215 MRC1P22897 1456 aa13.29□□□□□ -0.28
ERGIC1-211ENST00000523215 GLI3P10071 1580 aa13.29□□□□□ -0.28
ERGIC1-211ENST00000523215 SEC24BO95487 1268 aa13.28□□□□□ -0.28
ERGIC1-211ENST00000523215 TRPM3Q9HCF6 1732 aaPredicted RBP13.28□□□□□ -0.28
ERGIC1-211ENST00000523215 EVC2Q86UK5 1308 aa13.28□□□□□ -0.28
ERGIC1-211ENST00000523215 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.28□□□□□ -0.28
ERGIC1-211ENST00000523215 IDI1Q13907 227 aa13.27□□□□□ -0.28
ERGIC1-211ENST00000523215 CNPY4Q8N129 248 aa13.27□□□□□ -0.28
ERGIC1-211ENST00000523215 KIAA0232Q92628 1395 aa13.27□□□□□ -0.28
ERGIC1-211ENST00000523215 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.28
ERGIC1-211ENST00000523215 LTN1O94822 1766 aa13.27□□□□□ -0.29
ERGIC1-211ENST00000523215 PLEKHG2Q9H7P9 1386 aa13.27□□□□□ -0.29
ERGIC1-211ENST00000523215 NUCB1Q02818 461 aa13.26□□□□□ -0.29
ERGIC1-211ENST00000523215 RGPD8O14715 1765 aaPredicted RBP13.26□□□□□ -0.29
ERGIC1-211ENST00000523215 KDRP35968 1356 aa13.26□□□□□ -0.29
ERGIC1-211ENST00000523215 AK9Q5TCS8 1911 aa13.26□□□□□ -0.29
ERGIC1-211ENST00000523215 NUTM2DQ5VT03 806 aaPredicted RBP13.26□□□□□ -0.29
ERGIC1-211ENST00000523215 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
ERGIC1-211ENST00000523215 ADAMTS13Q76LX8 1427 aa13.25□□□□□ -0.29
ERGIC1-211ENST00000523215 TCP11L2Q8N4U5 519 aa13.25□□□□□ -0.29
ERGIC1-211ENST00000523215 CRB1P82279 1406 aa13.25□□□□□ -0.29
ERGIC1-211ENST00000523215 CYP2E1P05181 493 aaPredicted RBP13.25□□□□□ -0.29
ERGIC1-211ENST00000523215 NEFMP07197 916 aa13.25□□□□□ -0.29
ERGIC1-211ENST00000523215 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
ERGIC1-211ENST00000523215 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
ERGIC1-211ENST00000523215 MYH16Q9H6N6 1097 aa13.24□□□□□ -0.29
ERGIC1-211ENST00000523215 MTHFSP49914 203 aa13.23□□□□□ -0.29
ERGIC1-211ENST00000523215 FRAT1Q92837 279 aaPredicted RBP13.23□□□□□ -0.29
ERGIC1-211ENST00000523215 OVOS2A0A0G2JMS6 1433 aa13.23□□□□□ -0.29
ERGIC1-211ENST00000523215 VGFO15240 615 aaPredicted RBP13.22□□□□□ -0.29
ERGIC1-211ENST00000523215 CHGAP10645 457 aaKnown RBP13.22□□□□□ -0.29
ERGIC1-211ENST00000523215 NFAT5O94916 1531 aa13.22□□□□□ -0.29
ERGIC1-211ENST00000523215 NBR1Q14596 966 aa13.22□□□□□ -0.29
ERGIC1-211ENST00000523215 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
ERGIC1-211ENST00000523215 HMGB1P09429 215 aaKnown RBP13.22□□□□□ -0.29
ERGIC1-211ENST00000523215 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
ERGIC1-211ENST00000523215 BMP2KLQ5H9B9 411 aa13.21□□□□□ -0.29
ERGIC1-211ENST00000523215 MORC1Q86VD1 984 aa13.21□□□□□ -0.29
ERGIC1-211ENST00000523215 SALL3Q9BXA9 1300 aa13.21□□□□□ -0.29
ERGIC1-211ENST00000523215 FYB1O15117 783 aa13.2□□□□□ -0.3
ERGIC1-211ENST00000523215 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-211ENST00000523215 LAMB4A4D0S4 1761 aa13.2□□□□□ -0.3
ERGIC1-211ENST00000523215 FCHSD2O94868 740 aa13.2□□□□□ -0.3
ERGIC1-211ENST00000523215 TMPOP42166 694 aaKnown RBP13.2□□□□□ -0.3
ERGIC1-211ENST00000523215 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
ERGIC1-211ENST00000523215 PRDM10Q9NQV6 1147 aa13.2□□□□□ -0.3
ERGIC1-211ENST00000523215 EPB41L2O43491 1005 aaKnown RBP13.19□□□□□ -0.3
ERGIC1-211ENST00000523215 PANK1Q8TE04 598 aa13.19□□□□□ -0.3
ERGIC1-211ENST00000523215 SLIT3O75094 1523 aa13.19□□□□□ -0.3
ERGIC1-211ENST00000523215 TRIM27P14373 513 aa13.19□□□□□ -0.3
ERGIC1-211ENST00000523215 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
ERGIC1-211ENST00000523215 PKD1L3Q7Z443 1732 aa13.19□□□□□ -0.3
ERGIC1-211ENST00000523215 ZNF592Q92610 1267 aa13.18□□□□□ -0.3
ERGIC1-211ENST00000523215 ZBTB7BO15156 539 aaPredicted RBP13.18□□□□□ -0.3
ERGIC1-211ENST00000523215 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
ERGIC1-211ENST00000523215 ATF7IPQ6VMQ6 1270 aa13.17□□□□□ -0.3
ERGIC1-211ENST00000523215 RWDD1Q9H446 243 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms