RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 SLIT3O75094 1523 aa19.91■□□□□ 0.78
CSGALNACT1-211ENST00000522854 SPATA31A3Q5VYP0 1347 aa19.91■□□□□ 0.78
CSGALNACT1-211ENST00000522854 USP19O94966 1318 aa19.9■□□□□ 0.78
CSGALNACT1-211ENST00000522854 ZC3H6P61129 1189 aaKnown RBP19.9■□□□□ 0.78
CSGALNACT1-211ENST00000522854 PHACTR3Q96KR7 559 aa19.9■□□□□ 0.78
CSGALNACT1-211ENST00000522854 ROBO1Q9Y6N7 1651 aa19.89■□□□□ 0.77
CSGALNACT1-211ENST00000522854 ZNF521Q96K83 1311 aa19.89■□□□□ 0.77
CSGALNACT1-211ENST00000522854 SPINK5Q9NQ38 1064 aaPredicted RBP19.89■□□□□ 0.77
CSGALNACT1-211ENST00000522854 SOS2Q07890 1332 aaPredicted RBP19.88■□□□□ 0.77
CSGALNACT1-211ENST00000522854 SULT6B1Q6IMI4 303 aa19.88■□□□□ 0.77
CSGALNACT1-211ENST00000522854 KCNH5Q8NCM2 988 aa19.88■□□□□ 0.77
CSGALNACT1-211ENST00000522854 RGPD1P0DJD0 1748 aa19.88■□□□□ 0.77
CSGALNACT1-211ENST00000522854 NHSL1Q5SYE7 1610 aa19.87■□□□□ 0.77
CSGALNACT1-211ENST00000522854 PHRF1Q9P1Y6 1649 aaKnown RBP19.87■□□□□ 0.77
CSGALNACT1-211ENST00000522854 FCHSD2O94868 740 aa19.87■□□□□ 0.77
CSGALNACT1-211ENST00000522854 MAPK8IP3Q9UPT6 1336 aa19.87■□□□□ 0.77
CSGALNACT1-211ENST00000522854 ARHGEF25Q86VW2 580 aa19.86■□□□□ 0.77
CSGALNACT1-211ENST00000522854 WWC1Q8IX03 1113 aa19.86■□□□□ 0.77
CSGALNACT1-211ENST00000522854 AXIN2Q9Y2T1 843 aa19.86■□□□□ 0.77
CSGALNACT1-211ENST00000522854 SUPT16HQ9Y5B9 1047 aaKnown RBP19.86■□□□□ 0.77
CSGALNACT1-211ENST00000522854 RGPD5Q99666 1765 aa19.86■□□□□ 0.77
CSGALNACT1-211ENST00000522854 CRYBG1Q9Y4K1 1723 aa19.85■□□□□ 0.77
CSGALNACT1-211ENST00000522854 EYA1Q99502 592 aa19.85■□□□□ 0.77
CSGALNACT1-211ENST00000522854 RGPD2P0DJD1 1756 aa19.85■□□□□ 0.77
CSGALNACT1-211ENST00000522854 USHBP1Q8N6Y0 703 aa19.84■□□□□ 0.77
CSGALNACT1-211ENST00000522854 IP6K1Q92551 441 aa19.84■□□□□ 0.77
CSGALNACT1-211ENST00000522854 TMPOP42166 694 aaKnown RBP19.84■□□□□ 0.77
CSGALNACT1-211ENST00000522854 PIP4K2BP78356 416 aa19.83■□□□□ 0.77
CSGALNACT1-211ENST00000522854 CHRNA2Q15822 529 aa19.83■□□□□ 0.76
CSGALNACT1-211ENST00000522854 ARHGEF10O15013 1369 aa19.82■□□□□ 0.76
CSGALNACT1-211ENST00000522854 GOLGA2Q08379 1002 aa19.82■□□□□ 0.76
CSGALNACT1-211ENST00000522854 LRRC59Q96AG4 307 aaKnown RBP19.82■□□□□ 0.76
CSGALNACT1-211ENST00000522854 RTL1A6NKG5 1358 aa19.81■□□□□ 0.76
CSGALNACT1-211ENST00000522854 RIPK4P57078 832 aa19.81■□□□□ 0.76
CSGALNACT1-211ENST00000522854 KIF24Q5T7B8 1368 aa19.81■□□□□ 0.76
CSGALNACT1-211ENST00000522854 PDE3BQ13370 1112 aa19.81■□□□□ 0.76
CSGALNACT1-211ENST00000522854 TRIM35Q9UPQ4 493 aa19.81■□□□□ 0.76
CSGALNACT1-211ENST00000522854 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
CSGALNACT1-211ENST00000522854 DLG5Q8TDM6 1919 aa19.8■□□□□ 0.76
CSGALNACT1-211ENST00000522854 IGSF1Q8N6C5 1336 aa19.79■□□□□ 0.76
CSGALNACT1-211ENST00000522854 IRX6P78412 446 aaPredicted RBP19.79■□□□□ 0.76
CSGALNACT1-211ENST00000522854 NBPF6Q5VWK0 638 aa19.79■□□□□ 0.76
CSGALNACT1-211ENST00000522854 NBPF4Q96M43 638 aa19.79■□□□□ 0.76
CSGALNACT1-211ENST00000522854 KIAA0232Q92628 1395 aa19.78■□□□□ 0.76
CSGALNACT1-211ENST00000522854 SLFN5Q08AF3 891 aa19.78■□□□□ 0.76
CSGALNACT1-211ENST00000522854 DUSP27Q5VZP5 1158 aa19.78■□□□□ 0.76
CSGALNACT1-211ENST00000522854 PNNQ9H307 717 aaKnown RBP19.78■□□□□ 0.76
CSGALNACT1-211ENST00000522854 THUMPD2Q9BTF0 503 aaKnown RBP19.77■□□□□ 0.76
CSGALNACT1-211ENST00000522854 ABCA3Q99758 1704 aa19.77■□□□□ 0.76
CSGALNACT1-211ENST00000522854 ANKRD24Q8TF21 1146 aa19.77■□□□□ 0.75
CSGALNACT1-211ENST00000522854 FAM83GA6ND36 823 aa19.76■□□□□ 0.75
CSGALNACT1-211ENST00000522854 NEFMP07197 916 aa19.76■□□□□ 0.75
CSGALNACT1-211ENST00000522854 COL18A1P39060 1754 aa19.76■□□□□ 0.75
CSGALNACT1-211ENST00000522854 NFE2L2Q16236 605 aa19.75■□□□□ 0.75
CSGALNACT1-211ENST00000522854 KDRP35968 1356 aa19.75■□□□□ 0.75
CSGALNACT1-211ENST00000522854 UBAP1LF5GYI3 381 aa19.75■□□□□ 0.75
CSGALNACT1-211ENST00000522854 HAP1P54257 671 aaPredicted RBP19.75■□□□□ 0.75
CSGALNACT1-211ENST00000522854 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
CSGALNACT1-211ENST00000522854 DCTN1Q14203 1278 aa19.74■□□□□ 0.75
CSGALNACT1-211ENST00000522854 AHDC1Q5TGY3 1603 aaPredicted RBP19.73■□□□□ 0.75
CSGALNACT1-211ENST00000522854 TOM1O60784 492 aa19.73■□□□□ 0.75
CSGALNACT1-211ENST00000522854 TRMT2AQ8IZ69 625 aaKnown RBP19.73■□□□□ 0.75
CSGALNACT1-211ENST00000522854 NGEFQ8N5V2 710 aa19.73■□□□□ 0.75
CSGALNACT1-211ENST00000522854 MTHFSDQ2M296 383 aaKnown RBP19.72■□□□□ 0.75
CSGALNACT1-211ENST00000522854 PHLPP1O60346 1717 aa19.72■□□□□ 0.75
CSGALNACT1-211ENST00000522854 ERBB3P21860 1342 aa19.72■□□□□ 0.75
CSGALNACT1-211ENST00000522854 E9PSI1 815 aa19.72■□□□□ 0.75
CSGALNACT1-211ENST00000522854 FKBP8Q14318 412 aa19.72■□□□□ 0.75
CSGALNACT1-211ENST00000522854 TSR2Q969E8 191 aaKnown RBP19.72■□□□□ 0.75
CSGALNACT1-211ENST00000522854 PRDM11Q9NQV5 511 aa19.71■□□□□ 0.75
CSGALNACT1-211ENST00000522854 WDR63Q8IWG1 891 aa19.7■□□□□ 0.74
CSGALNACT1-211ENST00000522854 RCAN3Q9UKA8 241 aa19.7■□□□□ 0.74
CSGALNACT1-211ENST00000522854 CPDO75976 1380 aa19.69■□□□□ 0.74
CSGALNACT1-211ENST00000522854 COL16A1Q07092 1604 aaPredicted RBP19.69■□□□□ 0.74
CSGALNACT1-211ENST00000522854 MCM10Q7L590 875 aa19.68■□□□□ 0.74
CSGALNACT1-211ENST00000522854 LAS1LQ9Y4W2 734 aaKnown RBP19.68■□□□□ 0.74
CSGALNACT1-211ENST00000522854 CAMTA1Q9Y6Y1 1673 aa19.68■□□□□ 0.74
CSGALNACT1-211ENST00000522854 CSB-PGBD3P0DP91 1061 aa19.67■□□□□ 0.74
CSGALNACT1-211ENST00000522854 NLRP2Q9NX02 1062 aa19.67■□□□□ 0.74
CSGALNACT1-211ENST00000522854 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
CSGALNACT1-211ENST00000522854 CERKQ8TCT0 537 aa19.66■□□□□ 0.74
CSGALNACT1-211ENST00000522854 FANCIQ9NVI1 1328 aa19.65■□□□□ 0.74
CSGALNACT1-211ENST00000522854 LMO7Q8WWI1 1683 aa19.65■□□□□ 0.74
CSGALNACT1-211ENST00000522854 PLIN1O60240 522 aa19.63■□□□□ 0.73
CSGALNACT1-211ENST00000522854 NEFLP07196 543 aa19.63■□□□□ 0.73
CSGALNACT1-211ENST00000522854 STRN4Q9NRL3 753 aa19.63■□□□□ 0.73
CSGALNACT1-211ENST00000522854 FAM208AQ9UK61 1670 aaKnown RBP19.62■□□□□ 0.73
CSGALNACT1-211ENST00000522854 COL22A1Q8NFW1 1626 aaPredicted RBP19.62■□□□□ 0.73
CSGALNACT1-211ENST00000522854 NCAPD2Q15021 1401 aa19.62■□□□□ 0.73
CSGALNACT1-211ENST00000522854 MYH16Q9H6N6 1097 aa19.61■□□□□ 0.73
CSGALNACT1-211ENST00000522854 COL5A2P05997 1499 aaPredicted RBP19.61■□□□□ 0.73
CSGALNACT1-211ENST00000522854 ADAMTS2O95450 1211 aa19.61■□□□□ 0.73
CSGALNACT1-211ENST00000522854 NUTM2BA6NNL0 878 aaPredicted RBP19.6■□□□□ 0.73
CSGALNACT1-211ENST00000522854 NUTM2EB1AL46 878 aaPredicted RBP19.6■□□□□ 0.73
CSGALNACT1-211ENST00000522854 EXOSC9Q06265 439 aaKnown RBP19.6■□□□□ 0.73
CSGALNACT1-211ENST00000522854 NUTM2AQ8IVF1 878 aaPredicted RBP19.6■□□□□ 0.73
CSGALNACT1-211ENST00000522854 GAS2L2Q8NHY3 880 aa19.6■□□□□ 0.73
CSGALNACT1-211ENST00000522854 RNF123Q5XPI4 1314 aa19.6■□□□□ 0.73
CSGALNACT1-211ENST00000522854 BCAR3O75815 825 aa19.59■□□□□ 0.73
CSGALNACT1-211ENST00000522854 ABCC6O95255 1503 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms