RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ZBTB24O43167 697 aaPredicted RBP11.33□□□□□ -0.6
SDCBP-210ENST00000522843 RANGAP1P46060 587 aaPredicted RBP11.33□□□□□ -0.6
SDCBP-210ENST00000522843 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
SDCBP-210ENST00000522843 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
SDCBP-210ENST00000522843 ABCA6Q8N139 1617 aa11.33□□□□□ -0.6
SDCBP-210ENST00000522843 SMCPP49901 116 aaPredicted RBP11.32□□□□□ -0.6
SDCBP-210ENST00000522843 ZNF518AQ6AHZ1 1483 aa11.32□□□□□ -0.6
SDCBP-210ENST00000522843 HSPA1LP34931 641 aa11.31□□□□□ -0.6
SDCBP-210ENST00000522843 EFCAB2Q5VUJ9 269 aa11.31□□□□□ -0.6
SDCBP-210ENST00000522843 PRDM9Q9NQV7 894 aa11.31□□□□□ -0.6
SDCBP-210ENST00000522843 GMPR2Q9P2T1 348 aaKnown RBP11.31□□□□□ -0.6
SDCBP-210ENST00000522843 AGLP35573 1532 aa11.3□□□□□ -0.6
SDCBP-210ENST00000522843 MYO5CQ9NQX4 1742 aa11.3□□□□□ -0.6
SDCBP-210ENST00000522843 TTC24A2A3L6 582 aaPredicted RBP11.3□□□□□ -0.6
SDCBP-210ENST00000522843 C11orf95C9JLR9 678 aaPredicted RBP11.3□□□□□ -0.6
SDCBP-210ENST00000522843 GRIPAP1Q4V328 841 aa11.3□□□□□ -0.6
SDCBP-210ENST00000522843 MSS51Q4VC12 460 aa11.3□□□□□ -0.6
SDCBP-210ENST00000522843 PHOX2BQ99453 314 aa11.3□□□□□ -0.6
SDCBP-210ENST00000522843 KIF14Q15058 1648 aa11.29□□□□□ -0.6
SDCBP-210ENST00000522843 MLH3Q9UHC1 1453 aa11.28□□□□□ -0.6
SDCBP-210ENST00000522843 RNF19BQ6ZMZ0 732 aa11.28□□□□□ -0.6
SDCBP-210ENST00000522843 WFS1O76024 890 aa11.27□□□□□ -0.61
SDCBP-210ENST00000522843 NPATQ14207 1427 aa11.26□□□□□ -0.61
SDCBP-210ENST00000522843 TCOF1Q13428 1488 aaKnown RBP11.26□□□□□ -0.61
SDCBP-210ENST00000522843 WNT7AO00755 349 aa11.26□□□□□ -0.61
SDCBP-210ENST00000522843 CNTLNQ9NXG0 1405 aa11.25□□□□□ -0.61
SDCBP-210ENST00000522843 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
SDCBP-210ENST00000522843 ARHGAP5Q13017 1502 aa11.25□□□□□ -0.61
SDCBP-210ENST00000522843 ALKQ9UM73 1620 aa11.24□□□□□ -0.61
SDCBP-210ENST00000522843 Q3C1V9 767 aa11.24□□□□□ -0.61
SDCBP-210ENST00000522843 SNIP1Q8TAD8 396 aaKnown RBP11.24□□□□□ -0.61
SDCBP-210ENST00000522843 ZMYM3Q14202 1370 aa11.24□□□□□ -0.61
SDCBP-210ENST00000522843 MROH2AA6NES4 1674 aa11.24□□□□□ -0.61
SDCBP-210ENST00000522843 ZNF142P52746 1687 aaPredicted RBP11.24□□□□□ -0.61
SDCBP-210ENST00000522843 KIDINS220Q9ULH0 1771 aa11.23□□□□□ -0.61
SDCBP-210ENST00000522843 MYO3AQ8NEV4 1616 aa11.23□□□□□ -0.61
SDCBP-210ENST00000522843 CDC42BPBQ9Y5S2 1711 aa11.23□□□□□ -0.61
SDCBP-210ENST00000522843 SMPD1P17405 629 aa11.22□□□□□ -0.61
SDCBP-210ENST00000522843 MMP16P51512 607 aa11.22□□□□□ -0.61
SDCBP-210ENST00000522843 PIP4K2BP78356 416 aa11.22□□□□□ -0.61
SDCBP-210ENST00000522843 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
SDCBP-210ENST00000522843 ABCC1P33527 1531 aa11.21□□□□□ -0.61
SDCBP-210ENST00000522843 TRIM32Q13049 653 aa11.21□□□□□ -0.61
SDCBP-210ENST00000522843 CEP170BQ9Y4F5 1589 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-210ENST00000522843 TROQ12816 1431 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-210ENST00000522843 PTPRKQ15262 1439 aa11.2□□□□□ -0.62
SDCBP-210ENST00000522843 NFX1Q12986 1120 aaKnown RBP11.2□□□□□ -0.62
SDCBP-210ENST00000522843 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
SDCBP-210ENST00000522843 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
SDCBP-210ENST00000522843 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
SDCBP-210ENST00000522843 MRGPRX2Q96LB1 330 aa11.19□□□□□ -0.62
SDCBP-210ENST00000522843 ATP13A2Q9NQ11 1180 aa11.19□□□□□ -0.62
SDCBP-210ENST00000522843 RGS17Q9UGC6 210 aaPredicted RBP11.19□□□□□ -0.62
SDCBP-210ENST00000522843 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
SDCBP-210ENST00000522843 CD46P15529 392 aa11.18□□□□□ -0.62
SDCBP-210ENST00000522843 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
SDCBP-210ENST00000522843 NEURL4Q96JN8 1562 aa11.18□□□□□ -0.62
SDCBP-210ENST00000522843 CLTCQ00610 1675 aaKnown RBP11.17□□□□□ -0.62
SDCBP-210ENST00000522843 J3QL48 77 aa11.17□□□□□ -0.62
SDCBP-210ENST00000522843 TOM1O60784 492 aa11.17□□□□□ -0.62
SDCBP-210ENST00000522843 SUPT6HQ7KZ85 1726 aaKnown RBP11.17□□□□□ -0.62
SDCBP-210ENST00000522843 PREX2Q70Z35 1606 aa11.17□□□□□ -0.62
SDCBP-210ENST00000522843 WIPF1O43516 503 aa11.16□□□□□ -0.62
SDCBP-210ENST00000522843 SHANK2Q9UPX8 1470 aa11.16□□□□□ -0.62
SDCBP-210ENST00000522843 SAMD9LQ8IVG5 1584 aa11.16□□□□□ -0.62
SDCBP-210ENST00000522843 CPS1P31327 1500 aa11.15□□□□□ -0.62
SDCBP-210ENST00000522843 KDM4AO75164 1064 aa11.15□□□□□ -0.62
SDCBP-210ENST00000522843 DXOO77932 396 aaKnown RBP11.15□□□□□ -0.62
SDCBP-210ENST00000522843 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
SDCBP-210ENST00000522843 SENP2Q9HC62 589 aa11.15□□□□□ -0.62
SDCBP-210ENST00000522843 ATP1B4Q9UN42 357 aaPredicted RBP11.15□□□□□ -0.62
SDCBP-210ENST00000522843 DNMT1P26358 1616 aaKnown RBP11.15□□□□□ -0.62
SDCBP-210ENST00000522843 VWDEQ8N2E2 1590 aa11.15□□□□□ -0.62
SDCBP-210ENST00000522843 SNRPBP14678 240 aaKnown RBP11.14□□□□□ -0.63
SDCBP-210ENST00000522843 STK17AQ9UEE5 414 aa11.14□□□□□ -0.63
SDCBP-210ENST00000522843 CDK11AQ9UQ88 783 aaPredicted RBP11.14□□□□□ -0.63
SDCBP-210ENST00000522843 PLXNC1O60486 1568 aa11.14□□□□□ -0.63
SDCBP-210ENST00000522843 ARHGAP35Q9NRY4 1499 aa11.13□□□□□ -0.63
SDCBP-210ENST00000522843 INSM1Q01101 510 aaPredicted RBP11.13□□□□□ -0.63
SDCBP-210ENST00000522843 TRIM47Q96LD4 638 aa11.13□□□□□ -0.63
SDCBP-210ENST00000522843 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
SDCBP-210ENST00000522843 CLIP1P30622 1438 aa11.12□□□□□ -0.63
SDCBP-210ENST00000522843 FMN1Q68DA7 1419 aa11.12□□□□□ -0.63
SDCBP-210ENST00000522843 USP46P62068 366 aa11.12□□□□□ -0.63
SDCBP-210ENST00000522843 CCDC24Q8N4L8 307 aa11.12□□□□□ -0.63
SDCBP-210ENST00000522843 HPS1Q92902 700 aa11.12□□□□□ -0.63
SDCBP-210ENST00000522843 POLR1AO95602 1720 aaPredicted RBP11.12□□□□□ -0.63
SDCBP-210ENST00000522843 TERTO14746 1132 aaKnown RBP11.11□□□□□ -0.63
SDCBP-210ENST00000522843 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
SDCBP-210ENST00000522843 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
SDCBP-210ENST00000522843 SYCP2Q9BX26 1530 aa11.09□□□□□ -0.63
SDCBP-210ENST00000522843 STRCP1A6NGW2 1772 aa11.09□□□□□ -0.63
SDCBP-210ENST00000522843 SLC24A1O60721 1099 aa11.09□□□□□ -0.63
SDCBP-210ENST00000522843 WNT7BP56706 349 aa11.09□□□□□ -0.63
SDCBP-210ENST00000522843 SKOR1P84550 965 aa11.09□□□□□ -0.63
SDCBP-210ENST00000522843 MAP2K5Q13163 448 aa11.09□□□□□ -0.63
SDCBP-210ENST00000522843 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
SDCBP-210ENST00000522843 EEA1Q15075 1411 aa11.09□□□□□ -0.63
SDCBP-210ENST00000522843 INO80Q9ULG1 1556 aaPredicted RBP11.08□□□□□ -0.64
SDCBP-210ENST00000522843 A2MP01023 1474 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms