RNA–Protein interactions for RNA: ENST00000522519.5

MSC-AS1-208, MSC antisense RNA 1, humanhuman

TSL 2 BASIC

Gene MSC-AS1, Length 1,537 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-208ENST00000522519 GLI3P10071 1580 aa21.44■■□□□ 1.02
MSC-AS1-208ENST00000522519 UNC5CLQ8IV45 518 aa21.44■■□□□ 1.02
MSC-AS1-208ENST00000522519 ZBTB7CA1YPR0 619 aa21.43■■□□□ 1.02
MSC-AS1-208ENST00000522519 NPC1L1Q9UHC9 1359 aa21.42■■□□□ 1.02
MSC-AS1-208ENST00000522519 POTEAQ6S8J7 498 aa21.41■■□□□ 1.02
MSC-AS1-208ENST00000522519 FBLN1P23142 703 aa21.4■■□□□ 1.02
MSC-AS1-208ENST00000522519 TRPC5Q9UL62 973 aaPredicted RBP21.4■■□□□ 1.02
MSC-AS1-208ENST00000522519 MAP3K19Q56UN5 1328 aa21.4■■□□□ 1.02
MSC-AS1-208ENST00000522519 RTL1A6NKG5 1358 aa21.39■■□□□ 1.01
MSC-AS1-208ENST00000522519 BLMP54132 1417 aaPredicted RBP21.39■■□□□ 1.01
MSC-AS1-208ENST00000522519 BRWD3Q6RI45 1802 aa21.38■■□□□ 1.01
MSC-AS1-208ENST00000522519 MIER1Q8N108 512 aa21.38■■□□□ 1.01
MSC-AS1-208ENST00000522519 QTRT2Q9H974 415 aaKnown RBP21.38■■□□□ 1.01
MSC-AS1-208ENST00000522519 AXIN2Q9Y2T1 843 aa21.38■■□□□ 1.01
MSC-AS1-208ENST00000522519 RRS1Q15050 365 aaKnown RBP21.37■■□□□ 1.01
MSC-AS1-208ENST00000522519 KIF24Q5T7B8 1368 aa21.37■■□□□ 1.01
MSC-AS1-208ENST00000522519 DDX10Q13206 875 aaKnown RBP21.36■■□□□ 1.01
MSC-AS1-208ENST00000522519 VPS72Q15906 364 aa21.36■■□□□ 1.01
MSC-AS1-208ENST00000522519 SMG6Q86US8 1419 aaKnown RBP21.36■■□□□ 1.01
MSC-AS1-208ENST00000522519 MORC1Q86VD1 984 aa21.35■■□□□ 1.01
MSC-AS1-208ENST00000522519 CC2D1BQ5T0F9 858 aaKnown RBP21.34■■□□□ 1.01
MSC-AS1-208ENST00000522519 STRN4Q9NRL3 753 aa21.34■■□□□ 1.01
MSC-AS1-208ENST00000522519 THSD7AQ9UPZ6 1657 aa21.34■■□□□ 1.01
MSC-AS1-208ENST00000522519 TNNT2P45379 298 aaPredicted RBP21.34■■□□□ 1.01
MSC-AS1-208ENST00000522519 IP6K1Q92551 441 aa21.34■■□□□ 1.01
MSC-AS1-208ENST00000522519 FLT4P35916 1363 aa21.34■■□□□ 1.01
MSC-AS1-208ENST00000522519 CDK12Q9NYV4 1490 aaPredicted RBP21.33■■□□□ 1.01
MSC-AS1-208ENST00000522519 HOXC9P31274 260 aa21.33■■□□□ 1
MSC-AS1-208ENST00000522519 AMPHP49418 695 aa21.33■■□□□ 1
MSC-AS1-208ENST00000522519 RBM6P78332 1123 aaKnown RBP21.33■■□□□ 1
MSC-AS1-208ENST00000522519 GJD4Q96KN9 370 aaPredicted RBP21.33■■□□□ 1
MSC-AS1-208ENST00000522519 EMILIN1Q9Y6C2 1016 aa21.33■■□□□ 1
MSC-AS1-208ENST00000522519 ERBB3P21860 1342 aa21.33■■□□□ 1
MSC-AS1-208ENST00000522519 CRB1P82279 1406 aa21.33■■□□□ 1
MSC-AS1-208ENST00000522519 EVA1CP58658 441 aa21.32■■□□□ 1
MSC-AS1-208ENST00000522519 SPATA31A5Q5VU36 1347 aa21.32■■□□□ 1
MSC-AS1-208ENST00000522519 SPATA31A7Q8IWB4 1347 aa21.32■■□□□ 1
MSC-AS1-208ENST00000522519 WDR17Q8IZU2 1322 aa21.32■■□□□ 1
MSC-AS1-208ENST00000522519 PARP4Q9UKK3 1724 aaKnown RBP21.32■■□□□ 1
MSC-AS1-208ENST00000522519 RXRBP28702 533 aa21.31■■□□□ 1
MSC-AS1-208ENST00000522519 LARP1Q6PKG0 1096 aaKnown RBP21.31■■□□□ 1
MSC-AS1-208ENST00000522519 POLKQ9UBT6 870 aa21.31■■□□□ 1
MSC-AS1-208ENST00000522519 CCDC9Q9Y3X0 531 aaKnown RBP21.3■■□□□ 1
MSC-AS1-208ENST00000522519 RGS12O14924 1447 aa21.3■■□□□ 1
MSC-AS1-208ENST00000522519 INSRP06213 1382 aa21.3■■□□□ 1
MSC-AS1-208ENST00000522519 SPATA31A1Q5TZJ5 1347 aa21.3■■□□□ 1
MSC-AS1-208ENST00000522519 CNGB1Q14028 1251 aaPredicted RBP21.28■■□□□ 1
MSC-AS1-208ENST00000522519 ANKRD24Q8TF21 1146 aa21.28■■□□□ 1
MSC-AS1-208ENST00000522519 LRRC37A3O60309 1634 aa21.27■■□□□ 1
MSC-AS1-208ENST00000522519 CSB-PGBD3P0DP91 1061 aa21.26■□□□□ 0.99
MSC-AS1-208ENST00000522519 HSP90AB2PQ58FF8 381 aa21.26■□□□□ 0.99
MSC-AS1-208ENST00000522519 TOM1L2Q6ZVM7 507 aa21.26■□□□□ 0.99
MSC-AS1-208ENST00000522519 RGPD1P0DJD0 1748 aa21.26■□□□□ 0.99
MSC-AS1-208ENST00000522519 PPM1GO15355 546 aaPredicted RBP21.25■□□□□ 0.99
MSC-AS1-208ENST00000522519 PARD3Q8TEW0 1356 aa21.25■□□□□ 0.99
MSC-AS1-208ENST00000522519 USP35Q9P2H5 1018 aa21.24■□□□□ 0.99
MSC-AS1-208ENST00000522519 ILDR2Q71H61 639 aa21.24■□□□□ 0.99
MSC-AS1-208ENST00000522519 LTV1Q96GA3 475 aaPredicted RBP21.24■□□□□ 0.99
MSC-AS1-208ENST00000522519 TCP11L2Q8N4U5 519 aa21.23■□□□□ 0.99
MSC-AS1-208ENST00000522519 CARD10Q9BWT7 1032 aa21.23■□□□□ 0.99
MSC-AS1-208ENST00000522519 ONECUT3O60422 494 aaPredicted RBP21.22■□□□□ 0.99
MSC-AS1-208ENST00000522519 THRAP3Q9Y2W1 955 aaKnown RBP21.22■□□□□ 0.99
MSC-AS1-208ENST00000522519 SHANK3Q9BYB0 1731 aa21.21■□□□□ 0.99
MSC-AS1-208ENST00000522519 FAM98CQ17RN3 349 aaKnown RBP21.21■□□□□ 0.99
MSC-AS1-208ENST00000522519 BARGINQ6ZT62 677 aa21.21■□□□□ 0.99
MSC-AS1-208ENST00000522519 COL3A1P02461 1466 aaPredicted RBP21.2■□□□□ 0.98
MSC-AS1-208ENST00000522519 NLRP2Q9NX02 1062 aa21.2■□□□□ 0.98
MSC-AS1-208ENST00000522519 DISP2A7MBM2 1401 aa21.2■□□□□ 0.98
MSC-AS1-208ENST00000522519 MTHFSP49914 203 aa21.19■□□□□ 0.98
MSC-AS1-208ENST00000522519 NCAPD2Q15021 1401 aa21.19■□□□□ 0.98
MSC-AS1-208ENST00000522519 PKD1L3Q7Z443 1732 aa21.17■□□□□ 0.98
MSC-AS1-208ENST00000522519 KAT6BQ8WYB5 2073 aa21.17■□□□□ 0.98
MSC-AS1-208ENST00000522519 PPP2R1AP30153 589 aa21.17■□□□□ 0.98
MSC-AS1-208ENST00000522519 SBF2Q86WG5 1849 aa21.16■□□□□ 0.98
MSC-AS1-208ENST00000522519 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
MSC-AS1-208ENST00000522519 NBPF6Q5VWK0 638 aa21.16■□□□□ 0.98
MSC-AS1-208ENST00000522519 SEPT12Q8IYM1 358 aa21.16■□□□□ 0.98
MSC-AS1-208ENST00000522519 NBPF4Q96M43 638 aa21.16■□□□□ 0.98
MSC-AS1-208ENST00000522519 A0A0G2JS52 829 aa21.14■□□□□ 0.98
MSC-AS1-208ENST00000522519 MYT1Q01538 1121 aa21.14■□□□□ 0.98
MSC-AS1-208ENST00000522519 RALBP1Q15311 655 aa21.14■□□□□ 0.98
MSC-AS1-208ENST00000522519 EP400Q96L91 3159 aa21.14■□□□□ 0.97
MSC-AS1-208ENST00000522519 MEGF6O75095 1541 aa21.14■□□□□ 0.97
MSC-AS1-208ENST00000522519 ANP32CO43423 234 aa21.14■□□□□ 0.97
MSC-AS1-208ENST00000522519 VIRMAQ69YN4 1812 aaKnown RBP21.13■□□□□ 0.97
MSC-AS1-208ENST00000522519 CDCA7Q9BWT1 371 aaPredicted RBP21.13■□□□□ 0.97
MSC-AS1-208ENST00000522519 USHBP1Q8N6Y0 703 aa21.12■□□□□ 0.97
MSC-AS1-208ENST00000522519 EYA1Q99502 592 aa21.12■□□□□ 0.97
MSC-AS1-208ENST00000522519 TNS2Q63HR2 1409 aa21.12■□□□□ 0.97
MSC-AS1-208ENST00000522519 IGSF1Q8N6C5 1336 aa21.11■□□□□ 0.97
MSC-AS1-208ENST00000522519 IL2RBP14784 551 aa21.1■□□□□ 0.97
MSC-AS1-208ENST00000522519 IL13P35225 146 aa21.1■□□□□ 0.97
MSC-AS1-208ENST00000522519 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
MSC-AS1-208ENST00000522519 OVOS2A0A0G2JMS6 1433 aa21.09■□□□□ 0.97
MSC-AS1-208ENST00000522519 MYBBP1AQ9BQG0 1328 aaKnown RBP21.09■□□□□ 0.97
MSC-AS1-208ENST00000522519 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
MSC-AS1-208ENST00000522519 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
MSC-AS1-208ENST00000522519 DDB1Q16531 1140 aa21.07■□□□□ 0.96
MSC-AS1-208ENST00000522519 KRT27Q7Z3Y8 459 aa21.07■□□□□ 0.96
MSC-AS1-208ENST00000522519 CFAP53Q96M91 514 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms