RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 ANO8Q9HCE9 1232 aaPredicted RBP21.98■■□□□ 1.11
TRAPPC9-213ENST00000522504 TRPM1Q7Z4N2 1603 aa21.97■■□□□ 1.11
TRAPPC9-213ENST00000522504 C11orf95C9JLR9 678 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC9-213ENST00000522504 PLSCR1O15162 318 aa21.96■■□□□ 1.11
TRAPPC9-213ENST00000522504 PROM2Q8N271 834 aa21.96■■□□□ 1.11
TRAPPC9-213ENST00000522504 KCNQ2O43526 872 aa21.95■■□□□ 1.1
TRAPPC9-213ENST00000522504 BCL11BQ9C0K0 894 aaPredicted RBP21.95■■□□□ 1.1
TRAPPC9-213ENST00000522504 SPON1Q9HCB6 807 aa21.95■■□□□ 1.1
TRAPPC9-213ENST00000522504 ZNF692Q9BU19 519 aaPredicted RBP21.94■■□□□ 1.1
TRAPPC9-213ENST00000522504 PDGFDQ9GZP0 370 aaPredicted RBP21.94■■□□□ 1.1
TRAPPC9-213ENST00000522504 ROCK2O75116 1388 aaKnown RBP21.94■■□□□ 1.1
TRAPPC9-213ENST00000522504 SBF2Q86WG5 1849 aa21.94■■□□□ 1.1
TRAPPC9-213ENST00000522504 UTRNP46939 3433 aa21.93■■□□□ 1.1
TRAPPC9-213ENST00000522504 NEUROD1Q13562 356 aa21.93■■□□□ 1.1
TRAPPC9-213ENST00000522504 NFAT5O94916 1531 aa21.92■■□□□ 1.1
TRAPPC9-213ENST00000522504 KCNH5Q8NCM2 988 aa21.92■■□□□ 1.1
TRAPPC9-213ENST00000522504 CARD10Q9BWT7 1032 aa21.92■■□□□ 1.1
TRAPPC9-213ENST00000522504 BCL9O00512 1426 aa21.91■■□□□ 1.1
TRAPPC9-213ENST00000522504 WNK3Q9BYP7 1800 aa21.9■■□□□ 1.1
TRAPPC9-213ENST00000522504 RGPD3A6NKT7 1758 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC9-213ENST00000522504 AKAP12Q02952 1782 aa21.9■■□□□ 1.1
TRAPPC9-213ENST00000522504 RGPD4Q7Z3J3 1758 aa21.9■■□□□ 1.1
TRAPPC9-213ENST00000522504 TTC21AQ8NDW8 1320 aa21.9■■□□□ 1.1
TRAPPC9-213ENST00000522504 CSB-PGBD3P0DP91 1061 aa21.9■■□□□ 1.1
TRAPPC9-213ENST00000522504 CDCA7Q9BWT1 371 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC9-213ENST00000522504 PPP1R1BQ9UD71 204 aaPredicted RBP21.9■■□□□ 1.1
TRAPPC9-213ENST00000522504 RGPD5Q99666 1765 aa21.89■■□□□ 1.1
TRAPPC9-213ENST00000522504 KTN1Q86UP2 1357 aaKnown RBP21.89■■□□□ 1.1
TRAPPC9-213ENST00000522504 YY1P25490 414 aa21.86■■□□□ 1.09
TRAPPC9-213ENST00000522504 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.86■■□□□ 1.09
TRAPPC9-213ENST00000522504 CASZ1Q86V15 1759 aa21.86■■□□□ 1.09
TRAPPC9-213ENST00000522504 CD163L1Q9NR16 1453 aa21.85■■□□□ 1.09
TRAPPC9-213ENST00000522504 EXOC5O00471 708 aa21.85■■□□□ 1.09
TRAPPC9-213ENST00000522504 NINLQ9Y2I6 1382 aa21.85■■□□□ 1.09
TRAPPC9-213ENST00000522504 ZBTB7AO95365 584 aa21.84■■□□□ 1.09
TRAPPC9-213ENST00000522504 TXNRD1Q16881 649 aa21.84■■□□□ 1.09
TRAPPC9-213ENST00000522504 NME9Q86XW9 330 aa21.84■■□□□ 1.09
TRAPPC9-213ENST00000522504 USP31Q70CQ4 1352 aa21.83■■□□□ 1.08
TRAPPC9-213ENST00000522504 CCDC7Q96M83 1385 aa21.83■■□□□ 1.08
TRAPPC9-213ENST00000522504 SBNO2Q9Y2G9 1366 aa21.83■■□□□ 1.08
TRAPPC9-213ENST00000522504 TNS2Q63HR2 1409 aa21.82■■□□□ 1.08
TRAPPC9-213ENST00000522504 PTGER2P43116 358 aa21.82■■□□□ 1.08
TRAPPC9-213ENST00000522504 ERBB3P21860 1342 aa21.8■■□□□ 1.08
TRAPPC9-213ENST00000522504 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
TRAPPC9-213ENST00000522504 ATF5Q9Y2D1 282 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC9-213ENST00000522504 ABCC6O95255 1503 aa21.8■■□□□ 1.08
TRAPPC9-213ENST00000522504 ACSBG1Q96GR2 724 aa21.79■■□□□ 1.08
TRAPPC9-213ENST00000522504 SLC12A5Q9H2X9 1139 aa21.79■■□□□ 1.08
TRAPPC9-213ENST00000522504 NLRP2Q9NX02 1062 aa21.79■■□□□ 1.08
TRAPPC9-213ENST00000522504 SLC15A2Q16348 729 aa21.78■■□□□ 1.08
TRAPPC9-213ENST00000522504 STK32BQ9NY57 414 aa21.78■■□□□ 1.08
TRAPPC9-213ENST00000522504 TMC1Q8TDI8 760 aa21.77■■□□□ 1.08
TRAPPC9-213ENST00000522504 CARD11Q9BXL7 1154 aa21.77■■□□□ 1.08
TRAPPC9-213ENST00000522504 MYOM1P52179 1685 aa21.75■■□□□ 1.07
TRAPPC9-213ENST00000522504 USP54Q70EL1 1684 aa21.75■■□□□ 1.07
TRAPPC9-213ENST00000522504 ANKRD24Q8TF21 1146 aa21.75■■□□□ 1.07
TRAPPC9-213ENST00000522504 IL2RBP14784 551 aa21.74■■□□□ 1.07
TRAPPC9-213ENST00000522504 NHSQ6T4R5 1651 aa21.74■■□□□ 1.07
TRAPPC9-213ENST00000522504 GOLGB1Q14789 3259 aaKnown RBP21.73■■□□□ 1.07
TRAPPC9-213ENST00000522504 SGIP1Q9BQI5 828 aa21.73■■□□□ 1.07
TRAPPC9-213ENST00000522504 A0A1W2PP64 1363 aa21.73■■□□□ 1.07
TRAPPC9-213ENST00000522504 EDC4Q6P2E9 1401 aaKnown RBP21.72■■□□□ 1.07
TRAPPC9-213ENST00000522504 DCAF8L1A6NGE4 600 aa21.71■■□□□ 1.07
TRAPPC9-213ENST00000522504 HDGFL2Q7Z4V5 671 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC9-213ENST00000522504 FHDC1Q9C0D6 1143 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC9-213ENST00000522504 LTN1O94822 1766 aa21.7■■□□□ 1.06
TRAPPC9-213ENST00000522504 MTFR1LQ9H019 292 aa21.7■■□□□ 1.06
TRAPPC9-213ENST00000522504 LRRC4BQ9NT99 713 aa21.7■■□□□ 1.06
TRAPPC9-213ENST00000522504 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
TRAPPC9-213ENST00000522504 SYT17Q9BSW7 474 aa21.69■■□□□ 1.06
TRAPPC9-213ENST00000522504 PAPPAQ13219 1627 aa21.69■■□□□ 1.06
TRAPPC9-213ENST00000522504 IP6K1Q92551 441 aa21.67■■□□□ 1.06
TRAPPC9-213ENST00000522504 TERF2IPQ9NYB0 399 aa21.67■■□□□ 1.06
TRAPPC9-213ENST00000522504 FBLN1P23142 703 aa21.66■■□□□ 1.06
TRAPPC9-213ENST00000522504 LTV1Q96GA3 475 aaPredicted RBP21.66■■□□□ 1.06
TRAPPC9-213ENST00000522504 BTAF1O14981 1849 aa21.66■■□□□ 1.06
TRAPPC9-213ENST00000522504 TESK2Q96S53 571 aa21.65■■□□□ 1.06
TRAPPC9-213ENST00000522504 DDX54Q8TDD1 881 aaKnown RBP21.64■■□□□ 1.05
TRAPPC9-213ENST00000522504 PUS7Q96PZ0 661 aaKnown RBP21.64■■□□□ 1.05
TRAPPC9-213ENST00000522504 AKT1S1Q96B36 256 aa21.62■■□□□ 1.05
TRAPPC9-213ENST00000522504 ARXQ96QS3 562 aa21.62■■□□□ 1.05
TRAPPC9-213ENST00000522504 MAP3K19Q56UN5 1328 aa21.61■■□□□ 1.05
TRAPPC9-213ENST00000522504 ST20-MTHFSA0A0A6YYL1 179 aa21.61■■□□□ 1.05
TRAPPC9-213ENST00000522504 KCNQ4P56696 695 aa21.61■■□□□ 1.05
TRAPPC9-213ENST00000522504 TONSLQ96HA7 1378 aa21.61■■□□□ 1.05
TRAPPC9-213ENST00000522504 ZNF784Q8NCA9 323 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC9-213ENST00000522504 HOXC9P31274 260 aa21.59■■□□□ 1.05
TRAPPC9-213ENST00000522504 PRIM1P49642 420 aaKnown RBP21.58■■□□□ 1.05
TRAPPC9-213ENST00000522504 COG3Q96JB2 828 aa21.57■■□□□ 1.04
TRAPPC9-213ENST00000522504 NSD2O96028 1365 aa21.57■■□□□ 1.04
TRAPPC9-213ENST00000522504 KAT6BQ8WYB5 2073 aa21.57■■□□□ 1.04
TRAPPC9-213ENST00000522504 SLC27A3Q5K4L6 730 aa21.56■■□□□ 1.04
TRAPPC9-213ENST00000522504 SYTL4Q96C24 671 aaPredicted RBP21.56■■□□□ 1.04
TRAPPC9-213ENST00000522504 MAP3K5Q99683 1374 aa21.56■■□□□ 1.04
TRAPPC9-213ENST00000522504 FAM208AQ9UK61 1670 aaKnown RBP21.56■■□□□ 1.04
TRAPPC9-213ENST00000522504 PNPLA7Q6ZV29 1317 aa21.55■■□□□ 1.04
TRAPPC9-213ENST00000522504 MEGF6O75095 1541 aa21.55■■□□□ 1.04
TRAPPC9-213ENST00000522504 AMPHP49418 695 aa21.55■■□□□ 1.04
TRAPPC9-213ENST00000522504 ANKRD36BQ8N2N9 1353 aa21.54■■□□□ 1.04
TRAPPC9-213ENST00000522504 RRS1Q15050 365 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms