RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 SLIT3O75094 1523 aa30.54■■■□□ 2.48
HOXA3-205ENST00000522456 APBA3O96018 575 aa30.53■■■□□ 2.48
HOXA3-205ENST00000522456 NLRP6P59044 892 aa30.53■■■□□ 2.48
HOXA3-205ENST00000522456 TERF2IPQ9NYB0 399 aa30.53■■■□□ 2.48
HOXA3-205ENST00000522456 MON2Q7Z3U7 1717 aa30.53■■■□□ 2.48
HOXA3-205ENST00000522456 PIK3C2AO00443 1686 aa30.52■■■□□ 2.48
HOXA3-205ENST00000522456 TTC21AQ8NDW8 1320 aa30.52■■■□□ 2.48
HOXA3-205ENST00000522456 PARP4Q9UKK3 1724 aaKnown RBP30.52■■■□□ 2.48
HOXA3-205ENST00000522456 CRB1P82279 1406 aa30.51■■■□□ 2.47
HOXA3-205ENST00000522456 NINLQ9Y2I6 1382 aa30.51■■■□□ 2.47
HOXA3-205ENST00000522456 TTC21BQ7Z4L5 1316 aa30.5■■■□□ 2.47
HOXA3-205ENST00000522456 ZBTB7CA1YPR0 619 aa30.5■■■□□ 2.47
HOXA3-205ENST00000522456 AATKQ6ZMQ8 1374 aa30.49■■■□□ 2.47
HOXA3-205ENST00000522456 RREB1Q92766 1687 aa30.49■■■□□ 2.47
HOXA3-205ENST00000522456 CD163L1Q9NR16 1453 aa30.48■■■□□ 2.47
HOXA3-205ENST00000522456 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.46■■■□□ 2.47
HOXA3-205ENST00000522456 NUP188Q5SRE5 1749 aa30.44■■■□□ 2.46
HOXA3-205ENST00000522456 A0A1W2PP64 1363 aa30.44■■■□□ 2.46
HOXA3-205ENST00000522456 COL18A1P39060 1754 aa30.42■■■□□ 2.46
HOXA3-205ENST00000522456 POLR3GLQ9BT43 218 aa30.42■■■□□ 2.46
HOXA3-205ENST00000522456 LRRC37A3O60309 1634 aa30.42■■■□□ 2.46
HOXA3-205ENST00000522456 OVOS2A0A0G2JMS6 1433 aa30.41■■■□□ 2.46
HOXA3-205ENST00000522456 OVOS2A0A0J9YW53 1432 aa30.41■■■□□ 2.46
HOXA3-205ENST00000522456 OVOS2Q6IE36 1432 aa30.41■■■□□ 2.46
HOXA3-205ENST00000522456 EDC4Q6P2E9 1401 aaKnown RBP30.41■■■□□ 2.46
HOXA3-205ENST00000522456 C11orf95C9JLR9 678 aaPredicted RBP30.4■■■□□ 2.46
HOXA3-205ENST00000522456 KCNH5Q8NCM2 988 aa30.4■■■□□ 2.46
HOXA3-205ENST00000522456 PEAK1Q9H792 1746 aa30.39■■■□□ 2.46
HOXA3-205ENST00000522456 TOM1L2Q6ZVM7 507 aa30.39■■■□□ 2.46
HOXA3-205ENST00000522456 USP54Q70EL1 1684 aa30.38■■■□□ 2.45
HOXA3-205ENST00000522456 WNK3Q9BYP7 1800 aa30.37■■■□□ 2.45
HOXA3-205ENST00000522456 WDR17Q8IZU2 1322 aa30.37■■■□□ 2.45
HOXA3-205ENST00000522456 ANKRD36BQ8N2N9 1353 aa30.37■■■□□ 2.45
HOXA3-205ENST00000522456 NME9Q86XW9 330 aa30.36■■■□□ 2.45
HOXA3-205ENST00000522456 AXIN2Q9Y2T1 843 aa30.36■■■□□ 2.45
HOXA3-205ENST00000522456 USP31Q70CQ4 1352 aa30.36■■■□□ 2.45
HOXA3-205ENST00000522456 DDB1Q16531 1140 aa30.35■■■□□ 2.45
HOXA3-205ENST00000522456 NBPF14Q5TI25 921 aa30.35■■■□□ 2.45
HOXA3-205ENST00000522456 ARHGEF25Q86VW2 580 aa30.34■■■□□ 2.45
HOXA3-205ENST00000522456 SOX12O15370 315 aa30.32■■■□□ 2.44
HOXA3-205ENST00000522456 NFAT5O94916 1531 aa30.32■■■□□ 2.44
HOXA3-205ENST00000522456 RGPD3A6NKT7 1758 aaPredicted RBP30.31■■■□□ 2.44
HOXA3-205ENST00000522456 RGPD4Q7Z3J3 1758 aa30.31■■■□□ 2.44
HOXA3-205ENST00000522456 SBF2Q86WG5 1849 aa30.31■■■□□ 2.44
HOXA3-205ENST00000522456 RGPD5Q99666 1765 aa30.3■■■□□ 2.44
HOXA3-205ENST00000522456 ABCC6O95255 1503 aa30.29■■■□□ 2.44
HOXA3-205ENST00000522456 CDCA7Q9BWT1 371 aaPredicted RBP30.29■■■□□ 2.44
HOXA3-205ENST00000522456 MYOM1P52179 1685 aa30.28■■■□□ 2.44
HOXA3-205ENST00000522456 CSB-PGBD3P0DP91 1061 aa30.27■■■□□ 2.44
HOXA3-205ENST00000522456 CARD10Q9BWT7 1032 aa30.26■■■□□ 2.43
HOXA3-205ENST00000522456 PLSCR1O15162 318 aa30.24■■■□□ 2.43
HOXA3-205ENST00000522456 MARCH10Q8NA82 808 aaPredicted RBP30.24■■■□□ 2.43
HOXA3-205ENST00000522456 CARD14Q9BXL6 1004 aa30.24■■■□□ 2.43
HOXA3-205ENST00000522456 BCL11BQ9C0K0 894 aaPredicted RBP30.24■■■□□ 2.43
HOXA3-205ENST00000522456 BCL9O00512 1426 aa30.23■■■□□ 2.43
HOXA3-205ENST00000522456 COG3Q96JB2 828 aa30.23■■■□□ 2.43
HOXA3-205ENST00000522456 CCDC7Q96M83 1385 aa30.2■■■□□ 2.43
HOXA3-205ENST00000522456 FYB1O15117 783 aa30.2■■■□□ 2.43
HOXA3-205ENST00000522456 PTF1AQ7RTS3 328 aa30.2■■■□□ 2.43
HOXA3-205ENST00000522456 GGNBP2Q9H3C7 697 aa30.18■■■□□ 2.42
HOXA3-205ENST00000522456 SPON1Q9HCB6 807 aa30.18■■■□□ 2.42
HOXA3-205ENST00000522456 NSD3Q9BZ95 1437 aa30.18■■■□□ 2.42
HOXA3-205ENST00000522456 LTN1O94822 1766 aa30.17■■■□□ 2.42
HOXA3-205ENST00000522456 KIF7Q2M1P5 1343 aa30.17■■■□□ 2.42
HOXA3-205ENST00000522456 TNS2Q63HR2 1409 aa30.16■■■□□ 2.42
HOXA3-205ENST00000522456 PANK3Q9H999 370 aa30.16■■■□□ 2.42
HOXA3-205ENST00000522456 EXOC5O00471 708 aa30.15■■■□□ 2.42
HOXA3-205ENST00000522456 KCNQ2O43526 872 aa30.15■■■□□ 2.42
HOXA3-205ENST00000522456 ANO8Q9HCE9 1232 aaPredicted RBP30.15■■■□□ 2.42
HOXA3-205ENST00000522456 PPP1R1BQ9UD71 204 aaPredicted RBP30.14■■■□□ 2.42
HOXA3-205ENST00000522456 ERBB3P21860 1342 aa30.13■■■□□ 2.41
HOXA3-205ENST00000522456 CGNL1Q0VF96 1302 aa30.11■■■□□ 2.41
HOXA3-205ENST00000522456 CASZ1Q86V15 1759 aa30.1■■■□□ 2.41
HOXA3-205ENST00000522456 PROM2Q8N271 834 aa30.1■■■□□ 2.41
HOXA3-205ENST00000522456 KIF20BQ96Q89 1820 aa30.1■■■□□ 2.41
HOXA3-205ENST00000522456 FBLN1P23142 703 aa30.08■■■□□ 2.41
HOXA3-205ENST00000522456 NLRP2Q9NX02 1062 aa30.08■■■□□ 2.41
HOXA3-205ENST00000522456 NHSQ6T4R5 1651 aa30.07■■■□□ 2.4
HOXA3-205ENST00000522456 TXNRD1Q16881 649 aa30.05■■■□□ 2.4
HOXA3-205ENST00000522456 WASHC2AQ641Q2 1341 aa30.04■■■□□ 2.4
HOXA3-205ENST00000522456 ANKRD24Q8TF21 1146 aa30.04■■■□□ 2.4
HOXA3-205ENST00000522456 IL2RBP14784 551 aa30.03■■■□□ 2.4
HOXA3-205ENST00000522456 MAP3K19Q56UN5 1328 aa30.02■■■□□ 2.4
HOXA3-205ENST00000522456 AMPHP49418 695 aa30.02■■■□□ 2.4
HOXA3-205ENST00000522456 PDGFDQ9GZP0 370 aaPredicted RBP30.02■■■□□ 2.4
HOXA3-205ENST00000522456 IP6K1Q92551 441 aa30.01■■■□□ 2.39
HOXA3-205ENST00000522456 STK32BQ9NY57 414 aa30.01■■■□□ 2.39
HOXA3-205ENST00000522456 KNSTRNQ9Y448 316 aa30.01■■■□□ 2.39
HOXA3-205ENST00000522456 RTL1A6NKG5 1358 aa30.01■■■□□ 2.39
HOXA3-205ENST00000522456 RRS1Q15050 365 aaKnown RBP30■■■□□ 2.39
HOXA3-205ENST00000522456 FAM208AQ9UK61 1670 aaKnown RBP30■■■□□ 2.39
HOXA3-205ENST00000522456 ZEB1P37275 1124 aaPredicted RBP29.99■■■□□ 2.39
HOXA3-205ENST00000522456 ACSBG1Q96GR2 724 aa29.99■■■□□ 2.39
HOXA3-205ENST00000522456 ZBTB7AO95365 584 aa29.98■■■□□ 2.39
HOXA3-205ENST00000522456 SLC15A2Q16348 729 aa29.97■■■□□ 2.39
HOXA3-205ENST00000522456 HOXC9P31274 260 aa29.96■■■□□ 2.39
HOXA3-205ENST00000522456 DCAF8L1A6NGE4 600 aa29.95■■■□□ 2.39
HOXA3-205ENST00000522456 YY1P25490 414 aa29.94■■■□□ 2.38
HOXA3-205ENST00000522456 LTV1Q96GA3 475 aaPredicted RBP29.94■■■□□ 2.38
HOXA3-205ENST00000522456 BTAF1O14981 1849 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms