RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 COL22A1Q8NFW1 1626 aaPredicted RBP17.53■□□□□ 0.4
CPNE3-205ENST00000522240 ABCC6O95255 1503 aa17.52■□□□□ 0.4
CPNE3-205ENST00000522240 POTEAQ6S8J7 498 aa17.52■□□□□ 0.4
CPNE3-205ENST00000522240 PNISRQ8TF01 805 aaKnown RBP17.52■□□□□ 0.4
CPNE3-205ENST00000522240 JCADQ9P266 1359 aa17.51■□□□□ 0.39
CPNE3-205ENST00000522240 NUTM2GQ5VZR2 741 aa17.5■□□□□ 0.39
CPNE3-205ENST00000522240 FLT4P35916 1363 aa17.5■□□□□ 0.39
CPNE3-205ENST00000522240 LMOD2Q6P5Q4 547 aa17.49■□□□□ 0.39
CPNE3-205ENST00000522240 EMILIN1Q9Y6C2 1016 aa17.49■□□□□ 0.39
CPNE3-205ENST00000522240 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
CPNE3-205ENST00000522240 RRS1Q15050 365 aaKnown RBP17.48■□□□□ 0.39
CPNE3-205ENST00000522240 BLMP54132 1417 aaPredicted RBP17.47■□□□□ 0.39
CPNE3-205ENST00000522240 GCP02774 474 aa17.47■□□□□ 0.39
CPNE3-205ENST00000522240 FBLN1P23142 703 aa17.46■□□□□ 0.39
CPNE3-205ENST00000522240 WDR43Q15061 677 aaKnown RBP eCLIP17.46■□□□□ 0.39
CPNE3-205ENST00000522240 LRRC59Q96AG4 307 aaKnown RBP17.46■□□□□ 0.39
CPNE3-205ENST00000522240 CPDO75976 1380 aa17.45■□□□□ 0.38
CPNE3-205ENST00000522240 RGPD1P0DJD0 1748 aa17.45■□□□□ 0.38
CPNE3-205ENST00000522240 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
CPNE3-205ENST00000522240 SPATA31A6Q5VVP1 1343 aa17.45■□□□□ 0.38
CPNE3-205ENST00000522240 SOX12O15370 315 aa17.44■□□□□ 0.38
CPNE3-205ENST00000522240 PPM1GO15355 546 aaPredicted RBP17.43■□□□□ 0.38
CPNE3-205ENST00000522240 DIAPH1O60610 1272 aaKnown RBP17.43■□□□□ 0.38
CPNE3-205ENST00000522240 ARHGEF25Q86VW2 580 aa17.43■□□□□ 0.38
CPNE3-205ENST00000522240 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
CPNE3-205ENST00000522240 COL18A1P39060 1754 aa17.43■□□□□ 0.38
CPNE3-205ENST00000522240 HOXC9P31274 260 aa17.42■□□□□ 0.38
CPNE3-205ENST00000522240 AMPHP49418 695 aa17.42■□□□□ 0.38
CPNE3-205ENST00000522240 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
CPNE3-205ENST00000522240 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
CPNE3-205ENST00000522240 FAM208AQ9UK61 1670 aaKnown RBP17.4■□□□□ 0.38
CPNE3-205ENST00000522240 CAMTA1Q9Y6Y1 1673 aa17.4■□□□□ 0.38
CPNE3-205ENST00000522240 IP6K1Q92551 441 aa17.4■□□□□ 0.38
CPNE3-205ENST00000522240 IL13P35225 146 aa17.39■□□□□ 0.37
CPNE3-205ENST00000522240 ZNF772Q68DY9 489 aaPredicted RBP17.39■□□□□ 0.37
CPNE3-205ENST00000522240 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
CPNE3-205ENST00000522240 ADAMTS8Q9UP79 889 aa17.39■□□□□ 0.37
CPNE3-205ENST00000522240 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
CPNE3-205ENST00000522240 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
CPNE3-205ENST00000522240 CABLES1Q8TDN4 633 aa17.37■□□□□ 0.37
CPNE3-205ENST00000522240 KIAA0232Q92628 1395 aa17.37■□□□□ 0.37
CPNE3-205ENST00000522240 COL14A1Q05707 1796 aaKnown RBP17.36■□□□□ 0.37
CPNE3-205ENST00000522240 YTHDC1Q96MU7 727 aaKnown RBP17.36■□□□□ 0.37
CPNE3-205ENST00000522240 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
CPNE3-205ENST00000522240 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
CPNE3-205ENST00000522240 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
CPNE3-205ENST00000522240 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
CPNE3-205ENST00000522240 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
CPNE3-205ENST00000522240 IGSF1Q8N6C5 1336 aa17.35■□□□□ 0.37
CPNE3-205ENST00000522240 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
CPNE3-205ENST00000522240 RGPD5Q99666 1765 aa17.35■□□□□ 0.37
CPNE3-205ENST00000522240 LRP6O75581 1613 aa17.34■□□□□ 0.37
CPNE3-205ENST00000522240 KDRP35968 1356 aa17.34■□□□□ 0.37
CPNE3-205ENST00000522240 MEX3CQ5U5Q3 659 aaKnown RBP17.34■□□□□ 0.37
CPNE3-205ENST00000522240 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
CPNE3-205ENST00000522240 PLEKHG5O94827 1062 aa17.33■□□□□ 0.36
CPNE3-205ENST00000522240 HNRNPUQ00839 825 aaKnown RBP eCLIP17.33■□□□□ 0.36
CPNE3-205ENST00000522240 ERBB3P21860 1342 aa17.32■□□□□ 0.36
CPNE3-205ENST00000522240 ZBTB7CA1YPR0 619 aa17.32■□□□□ 0.36
CPNE3-205ENST00000522240 FCHSD2O94868 740 aa17.32■□□□□ 0.36
CPNE3-205ENST00000522240 RUNDC1Q96C34 613 aa17.32■□□□□ 0.36
CPNE3-205ENST00000522240 PRDM11Q9NQV5 511 aa17.32■□□□□ 0.36
CPNE3-205ENST00000522240 ZBED9Q6R2W3 1325 aa17.31■□□□□ 0.36
CPNE3-205ENST00000522240 RSPH6AQ9H0K4 717 aa17.31■□□□□ 0.36
CPNE3-205ENST00000522240 COL5A2P05997 1499 aaPredicted RBP17.31■□□□□ 0.36
CPNE3-205ENST00000522240 PLCH1Q4KWH8 1693 aa17.3■□□□□ 0.36
CPNE3-205ENST00000522240 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
CPNE3-205ENST00000522240 ANKRD24Q8TF21 1146 aa17.29■□□□□ 0.36
CPNE3-205ENST00000522240 RGPD2P0DJD1 1756 aa17.29■□□□□ 0.36
CPNE3-205ENST00000522240 NWD2Q9ULI1 1742 aa17.29■□□□□ 0.36
CPNE3-205ENST00000522240 RXRBP28702 533 aa17.28■□□□□ 0.36
CPNE3-205ENST00000522240 CHRNA2Q15822 529 aa17.28■□□□□ 0.36
CPNE3-205ENST00000522240 PLEKHF1Q96S99 279 aa17.28■□□□□ 0.36
CPNE3-205ENST00000522240 EYA1Q99502 592 aa17.28■□□□□ 0.36
CPNE3-205ENST00000522240 AXIN2Q9Y2T1 843 aa17.28■□□□□ 0.36
CPNE3-205ENST00000522240 PLEKHG2Q9H7P9 1386 aa17.28■□□□□ 0.36
CPNE3-205ENST00000522240 NRAPQ86VF7 1730 aa17.27■□□□□ 0.36
CPNE3-205ENST00000522240 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
CPNE3-205ENST00000522240 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
CPNE3-205ENST00000522240 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
CPNE3-205ENST00000522240 NEFMP07197 916 aa17.26■□□□□ 0.35
CPNE3-205ENST00000522240 HMOX1P09601 288 aa17.26■□□□□ 0.35
CPNE3-205ENST00000522240 PRKAR2BP31323 418 aa17.26■□□□□ 0.35
CPNE3-205ENST00000522240 SULT6B1Q6IMI4 303 aa17.26■□□□□ 0.35
CPNE3-205ENST00000522240 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
CPNE3-205ENST00000522240 WDR17Q8IZU2 1322 aa17.24■□□□□ 0.35
CPNE3-205ENST00000522240 AEBP1Q8IUX7 1158 aa17.24■□□□□ 0.35
CPNE3-205ENST00000522240 APAF1O14727 1248 aa17.23■□□□□ 0.35
CPNE3-205ENST00000522240 NBPF6Q5VWK0 638 aa17.23■□□□□ 0.35
CPNE3-205ENST00000522240 TCP11L2Q8N4U5 519 aa17.23■□□□□ 0.35
CPNE3-205ENST00000522240 NBPF4Q96M43 638 aa17.23■□□□□ 0.35
CPNE3-205ENST00000522240 SLIT2O94813 1529 aa17.22■□□□□ 0.35
CPNE3-205ENST00000522240 FAM83GA6ND36 823 aa17.22■□□□□ 0.35
CPNE3-205ENST00000522240 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.21■□□□□ 0.35
CPNE3-205ENST00000522240 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
CPNE3-205ENST00000522240 NUTM2BA6NNL0 878 aaPredicted RBP17.21■□□□□ 0.35
CPNE3-205ENST00000522240 NUTM2EB1AL46 878 aaPredicted RBP17.21■□□□□ 0.35
CPNE3-205ENST00000522240 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
CPNE3-205ENST00000522240 CCDC27Q2M243 656 aa17.21■□□□□ 0.35
CPNE3-205ENST00000522240 NUTM2AQ8IVF1 878 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms