RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 OVOS2A0A0J9YW53 1432 aa29.63■■■□□ 2.33
PABPC1-218ENST00000521865 OVOS2Q6IE36 1432 aa29.63■■■□□ 2.33
PABPC1-218ENST00000521865 PARP4Q9UKK3 1724 aaKnown RBP29.62■■■□□ 2.33
PABPC1-218ENST00000521865 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.61■■■□□ 2.33
PABPC1-218ENST00000521865 TMC1Q8TDI8 760 aa29.61■■■□□ 2.33
PABPC1-218ENST00000521865 TONSLQ96HA7 1378 aa29.6■■■□□ 2.33
PABPC1-218ENST00000521865 CDCA7Q9BWT1 371 aaPredicted RBP29.59■■■□□ 2.33
PABPC1-218ENST00000521865 SBNO2Q9Y2G9 1366 aa29.58■■■□□ 2.33
PABPC1-218ENST00000521865 CARD10Q9BWT7 1032 aa29.56■■■□□ 2.32
PABPC1-218ENST00000521865 AKAP12Q02952 1782 aa29.55■■■□□ 2.32
PABPC1-218ENST00000521865 HDGFL2Q7Z4V5 671 aaPredicted RBP29.55■■■□□ 2.32
PABPC1-218ENST00000521865 COL18A1P39060 1754 aa29.54■■■□□ 2.32
PABPC1-218ENST00000521865 LRRC37A3O60309 1634 aa29.53■■■□□ 2.32
PABPC1-218ENST00000521865 NME9Q86XW9 330 aa29.52■■■□□ 2.32
PABPC1-218ENST00000521865 MARCH10Q8NA82 808 aaPredicted RBP29.52■■■□□ 2.32
PABPC1-218ENST00000521865 RREB1Q92766 1687 aa29.51■■■□□ 2.31
PABPC1-218ENST00000521865 BCL11BQ9C0K0 894 aaPredicted RBP29.51■■■□□ 2.31
PABPC1-218ENST00000521865 EXOC5O00471 708 aa29.5■■■□□ 2.31
PABPC1-218ENST00000521865 SLC12A5Q9H2X9 1139 aa29.5■■■□□ 2.31
PABPC1-218ENST00000521865 NFAT5O94916 1531 aa29.5■■■□□ 2.31
PABPC1-218ENST00000521865 NUP188Q5SRE5 1749 aa29.49■■■□□ 2.31
PABPC1-218ENST00000521865 PLSCR1O15162 318 aa29.49■■■□□ 2.31
PABPC1-218ENST00000521865 USP31Q70CQ4 1352 aa29.49■■■□□ 2.31
PABPC1-218ENST00000521865 TERF2IPQ9NYB0 399 aa29.48■■■□□ 2.31
PABPC1-218ENST00000521865 CCDC7Q96M83 1385 aa29.48■■■□□ 2.31
PABPC1-218ENST00000521865 PEAK1Q9H792 1746 aa29.48■■■□□ 2.31
PABPC1-218ENST00000521865 PTF1AQ7RTS3 328 aa29.47■■■□□ 2.31
PABPC1-218ENST00000521865 NLRP2Q9NX02 1062 aa29.46■■■□□ 2.31
PABPC1-218ENST00000521865 MON2Q7Z3U7 1717 aa29.45■■■□□ 2.31
PABPC1-218ENST00000521865 CD163L1Q9NR16 1453 aa29.45■■■□□ 2.31
PABPC1-218ENST00000521865 PPP1R1BQ9UD71 204 aaPredicted RBP29.44■■■□□ 2.3
PABPC1-218ENST00000521865 SPON1Q9HCB6 807 aa29.43■■■□□ 2.3
PABPC1-218ENST00000521865 ABCC6O95255 1503 aa29.42■■■□□ 2.3
PABPC1-218ENST00000521865 EDC4Q6P2E9 1401 aaKnown RBP29.42■■■□□ 2.3
PABPC1-218ENST00000521865 ERBB3P21860 1342 aa29.42■■■□□ 2.3
PABPC1-218ENST00000521865 RGPD5Q99666 1765 aa29.41■■■□□ 2.3
PABPC1-218ENST00000521865 A0A1W2PP64 1363 aa29.4■■■□□ 2.3
PABPC1-218ENST00000521865 BCL9O00512 1426 aa29.4■■■□□ 2.3
PABPC1-218ENST00000521865 WNK3Q9BYP7 1800 aa29.4■■■□□ 2.3
PABPC1-218ENST00000521865 KCNQ2O43526 872 aa29.39■■■□□ 2.3
PABPC1-218ENST00000521865 ANKRD24Q8TF21 1146 aa29.39■■■□□ 2.3
PABPC1-218ENST00000521865 PUS7Q96PZ0 661 aaKnown RBP29.39■■■□□ 2.3
PABPC1-218ENST00000521865 ANO8Q9HCE9 1232 aaPredicted RBP29.38■■■□□ 2.29
PABPC1-218ENST00000521865 TNS2Q63HR2 1409 aa29.37■■■□□ 2.29
PABPC1-218ENST00000521865 ST20-MTHFSA0A0A6YYL1 179 aa29.37■■■□□ 2.29
PABPC1-218ENST00000521865 IL2RBP14784 551 aa29.36■■■□□ 2.29
PABPC1-218ENST00000521865 PROM2Q8N271 834 aa29.35■■■□□ 2.29
PABPC1-218ENST00000521865 SBF2Q86WG5 1849 aa29.35■■■□□ 2.29
PABPC1-218ENST00000521865 TXNRD1Q16881 649 aa29.34■■■□□ 2.29
PABPC1-218ENST00000521865 ACSBG1Q96GR2 724 aa29.34■■■□□ 2.29
PABPC1-218ENST00000521865 RGPD3A6NKT7 1758 aaPredicted RBP29.34■■■□□ 2.29
PABPC1-218ENST00000521865 RGPD4Q7Z3J3 1758 aa29.34■■■□□ 2.29
PABPC1-218ENST00000521865 NINLQ9Y2I6 1382 aa29.32■■■□□ 2.28
PABPC1-218ENST00000521865 SLC24A1O60721 1099 aa29.32■■■□□ 2.28
PABPC1-218ENST00000521865 TESK2Q96S53 571 aa29.32■■■□□ 2.28
PABPC1-218ENST00000521865 STK32BQ9NY57 414 aa29.32■■■□□ 2.28
PABPC1-218ENST00000521865 USP54Q70EL1 1684 aa29.31■■■□□ 2.28
PABPC1-218ENST00000521865 LTV1Q96GA3 475 aaPredicted RBP29.31■■■□□ 2.28
PABPC1-218ENST00000521865 COG3Q96JB2 828 aa29.31■■■□□ 2.28
PABPC1-218ENST00000521865 IP6K1Q92551 441 aa29.29■■■□□ 2.28
PABPC1-218ENST00000521865 LTN1O94822 1766 aa29.27■■■□□ 2.28
PABPC1-218ENST00000521865 DCAF8L1A6NGE4 600 aa29.27■■■□□ 2.28
PABPC1-218ENST00000521865 ZBTB7AO95365 584 aa29.26■■■□□ 2.27
PABPC1-218ENST00000521865 TRIM26Q12899 539 aaPredicted RBP29.26■■■□□ 2.27
PABPC1-218ENST00000521865 PDGFDQ9GZP0 370 aaPredicted RBP29.26■■■□□ 2.27
PABPC1-218ENST00000521865 AMPHP49418 695 aa29.24■■■□□ 2.27
PABPC1-218ENST00000521865 SLC15A2Q16348 729 aa29.24■■■□□ 2.27
PABPC1-218ENST00000521865 TMF1P82094 1093 aa29.22■■■□□ 2.27
PABPC1-218ENST00000521865 DDX54Q8TDD1 881 aaKnown RBP29.22■■■□□ 2.27
PABPC1-218ENST00000521865 ATF5Q9Y2D1 282 aaPredicted RBP29.22■■■□□ 2.27
PABPC1-218ENST00000521865 MAP3K19Q56UN5 1328 aa29.21■■■□□ 2.27
PABPC1-218ENST00000521865 FBLN1P23142 703 aa29.2■■■□□ 2.26
PABPC1-218ENST00000521865 ANKRD36BQ8N2N9 1353 aa29.19■■■□□ 2.26
PABPC1-218ENST00000521865 HOXC9P31274 260 aa29.19■■■□□ 2.26
PABPC1-218ENST00000521865 NHSQ6T4R5 1651 aa29.18■■■□□ 2.26
PABPC1-218ENST00000521865 USP47Q96K76 1375 aa29.17■■■□□ 2.26
PABPC1-218ENST00000521865 CASZ1Q86V15 1759 aa29.16■■■□□ 2.26
PABPC1-218ENST00000521865 YY1P25490 414 aa29.16■■■□□ 2.26
PABPC1-218ENST00000521865 GGNBP2Q9H3C7 697 aa29.15■■■□□ 2.26
PABPC1-218ENST00000521865 SYTL4Q96C24 671 aaPredicted RBP29.14■■■□□ 2.26
PABPC1-218ENST00000521865 PTGER2P43116 358 aa29.13■■■□□ 2.25
PABPC1-218ENST00000521865 RRS1Q15050 365 aaKnown RBP29.13■■■□□ 2.25
PABPC1-218ENST00000521865 MTFR1LQ9H019 292 aa29.13■■■□□ 2.25
PABPC1-218ENST00000521865 CDCA8Q53HL2 280 aa29.12■■■□□ 2.25
PABPC1-218ENST00000521865 FYB1O15117 783 aa29.11■■■□□ 2.25
PABPC1-218ENST00000521865 ZCRB1Q8TBF4 217 aaKnown RBP29.09■■■□□ 2.25
PABPC1-218ENST00000521865 RTL1A6NKG5 1358 aa29.09■■■□□ 2.25
PABPC1-218ENST00000521865 LRRC4BQ9NT99 713 aa29.08■■■□□ 2.25
PABPC1-218ENST00000521865 FAM208AQ9UK61 1670 aaKnown RBP29.08■■■□□ 2.25
PABPC1-218ENST00000521865 ZNF827Q17R98 1081 aa29.07■■■□□ 2.24
PABPC1-218ENST00000521865 BTAF1O14981 1849 aa29.06■■■□□ 2.24
PABPC1-218ENST00000521865 SMG6Q86US8 1419 aaKnown RBP29.06■■■□□ 2.24
PABPC1-218ENST00000521865 PRIM1P49642 420 aaKnown RBP29.06■■■□□ 2.24
PABPC1-218ENST00000521865 SLC27A3Q5K4L6 730 aa29.05■■■□□ 2.24
PABPC1-218ENST00000521865 USHBP1Q8N6Y0 703 aa29.05■■■□□ 2.24
PABPC1-218ENST00000521865 FHDC1Q9C0D6 1143 aaPredicted RBP29.05■■■□□ 2.24
PABPC1-218ENST00000521865 NBPF6Q5VWK0 638 aa29.04■■■□□ 2.24
PABPC1-218ENST00000521865 RAPGEF4Q8WZA2 1011 aa29.04■■■□□ 2.24
PABPC1-218ENST00000521865 NBPF4Q96M43 638 aa29.04■■■□□ 2.24
PABPC1-218ENST00000521865 MYOM1P52179 1685 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms