RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 NUP188Q5SRE5 1749 aa12.71□□□□□ -0.37
CTNNA1-229ENST00000521683 WDR17Q8IZU2 1322 aa12.71□□□□□ -0.37
CTNNA1-229ENST00000521683 WNK3Q9BYP7 1800 aa12.71□□□□□ -0.38
CTNNA1-229ENST00000521683 MON2Q7Z3U7 1717 aa12.71□□□□□ -0.38
CTNNA1-229ENST00000521683 ARHGEF25Q86VW2 580 aa12.7□□□□□ -0.38
CTNNA1-229ENST00000521683 NFAT5O94916 1531 aa12.7□□□□□ -0.38
CTNNA1-229ENST00000521683 RGPD3A6NKT7 1758 aaPredicted RBP12.7□□□□□ -0.38
CTNNA1-229ENST00000521683 RGPD4Q7Z3J3 1758 aa12.7□□□□□ -0.38
CTNNA1-229ENST00000521683 USP54Q70EL1 1684 aa12.7□□□□□ -0.38
CTNNA1-229ENST00000521683 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
CTNNA1-229ENST00000521683 ZBTB7CA1YPR0 619 aa12.69□□□□□ -0.38
CTNNA1-229ENST00000521683 TOM1L2Q6ZVM7 507 aa12.69□□□□□ -0.38
CTNNA1-229ENST00000521683 CDCA7Q9BWT1 371 aaPredicted RBP12.69□□□□□ -0.38
CTNNA1-229ENST00000521683 BCL9O00512 1426 aa12.69□□□□□ -0.38
CTNNA1-229ENST00000521683 DDB1Q16531 1140 aa12.68□□□□□ -0.38
CTNNA1-229ENST00000521683 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
CTNNA1-229ENST00000521683 USP31Q70CQ4 1352 aa12.68□□□□□ -0.38
CTNNA1-229ENST00000521683 NBPF14Q5TI25 921 aa12.67□□□□□ -0.38
CTNNA1-229ENST00000521683 CARD10Q9BWT7 1032 aa12.67□□□□□ -0.38
CTNNA1-229ENST00000521683 CARD11Q9BXL7 1154 aa12.67□□□□□ -0.38
CTNNA1-229ENST00000521683 SBF2Q86WG5 1849 aa12.67□□□□□ -0.38
CTNNA1-229ENST00000521683 CD163L1Q9NR16 1453 aa12.66□□□□□ -0.38
CTNNA1-229ENST00000521683 CCDC7Q96M83 1385 aa12.66□□□□□ -0.38
CTNNA1-229ENST00000521683 PLSCR1O15162 318 aa12.65□□□□□ -0.38
CTNNA1-229ENST00000521683 RGPD5Q99666 1765 aa12.65□□□□□ -0.38
CTNNA1-229ENST00000521683 PUS7Q96PZ0 661 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-229ENST00000521683 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
CTNNA1-229ENST00000521683 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
CTNNA1-229ENST00000521683 TNS2Q63HR2 1409 aa12.63□□□□□ -0.39
CTNNA1-229ENST00000521683 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-229ENST00000521683 SOX12O15370 315 aa12.63□□□□□ -0.39
CTNNA1-229ENST00000521683 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
CTNNA1-229ENST00000521683 MARCH10Q8NA82 808 aaPredicted RBP12.63□□□□□ -0.39
CTNNA1-229ENST00000521683 HDGFL2Q7Z4V5 671 aaPredicted RBP12.62□□□□□ -0.39
CTNNA1-229ENST00000521683 ERBB3P21860 1342 aa12.62□□□□□ -0.39
CTNNA1-229ENST00000521683 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
CTNNA1-229ENST00000521683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTNNA1-229ENST00000521683 A0A1W2PP64 1363 aa12.6□□□□□ -0.39
CTNNA1-229ENST00000521683 EXOC5O00471 708 aa12.6□□□□□ -0.39
CTNNA1-229ENST00000521683 NME9Q86XW9 330 aa12.6□□□□□ -0.39
CTNNA1-229ENST00000521683 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
CTNNA1-229ENST00000521683 TERF2IPQ9NYB0 399 aa12.6□□□□□ -0.39
CTNNA1-229ENST00000521683 LTN1O94822 1766 aa12.6□□□□□ -0.39
CTNNA1-229ENST00000521683 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
CTNNA1-229ENST00000521683 ADRA2BP18089 450 aa12.59□□□□□ -0.39
CTNNA1-229ENST00000521683 SLC12A5Q9H2X9 1139 aa12.59□□□□□ -0.39
CTNNA1-229ENST00000521683 SPON1Q9HCB6 807 aa12.59□□□□□ -0.39
CTNNA1-229ENST00000521683 NHSQ6T4R5 1651 aa12.58□□□□□ -0.4
CTNNA1-229ENST00000521683 KCNQ2O43526 872 aa12.58□□□□□ -0.4
CTNNA1-229ENST00000521683 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
CTNNA1-229ENST00000521683 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
CTNNA1-229ENST00000521683 CASZ1Q86V15 1759 aa12.58□□□□□ -0.4
CTNNA1-229ENST00000521683 TESK2Q96S53 571 aa12.57□□□□□ -0.4
CTNNA1-229ENST00000521683 IL2RBP14784 551 aa12.56□□□□□ -0.4
CTNNA1-229ENST00000521683 PROM2Q8N271 834 aa12.56□□□□□ -0.4
CTNNA1-229ENST00000521683 ANKRD24Q8TF21 1146 aa12.56□□□□□ -0.4
CTNNA1-229ENST00000521683 NLRP2Q9NX02 1062 aa12.56□□□□□ -0.4
CTNNA1-229ENST00000521683 FAM208AQ9UK61 1670 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-229ENST00000521683 ST20-MTHFSA0A0A6YYL1 179 aa12.54□□□□□ -0.4
CTNNA1-229ENST00000521683 TXNRD1Q16881 649 aa12.54□□□□□ -0.4
CTNNA1-229ENST00000521683 IP6K1Q92551 441 aa12.54□□□□□ -0.4
CTNNA1-229ENST00000521683 PPP1R1BQ9UD71 204 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-229ENST00000521683 STK32BQ9NY57 414 aa12.53□□□□□ -0.4
CTNNA1-229ENST00000521683 ANKRD36BQ8N2N9 1353 aa12.53□□□□□ -0.4
CTNNA1-229ENST00000521683 PAPPAQ13219 1627 aa12.52□□□□□ -0.4
CTNNA1-229ENST00000521683 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
CTNNA1-229ENST00000521683 COG3Q96JB2 828 aa12.52□□□□□ -0.41
CTNNA1-229ENST00000521683 BTAF1O14981 1849 aa12.51□□□□□ -0.41
CTNNA1-229ENST00000521683 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
CTNNA1-229ENST00000521683 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
CTNNA1-229ENST00000521683 MAP3K19Q56UN5 1328 aa12.5□□□□□ -0.41
CTNNA1-229ENST00000521683 USP47Q96K76 1375 aa12.49□□□□□ -0.41
CTNNA1-229ENST00000521683 HOXC9P31274 260 aa12.49□□□□□ -0.41
CTNNA1-229ENST00000521683 PDGFDQ9GZP0 370 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-229ENST00000521683 MYOM1P52179 1685 aa12.48□□□□□ -0.41
CTNNA1-229ENST00000521683 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
CTNNA1-229ENST00000521683 ZBTB7AO95365 584 aa12.48□□□□□ -0.41
CTNNA1-229ENST00000521683 PTGER2P43116 358 aa12.48□□□□□ -0.41
CTNNA1-229ENST00000521683 TMF1P82094 1093 aa12.48□□□□□ -0.41
CTNNA1-229ENST00000521683 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
CTNNA1-229ENST00000521683 MTFR1LQ9H019 292 aa12.48□□□□□ -0.41
CTNNA1-229ENST00000521683 AMPHP49418 695 aa12.47□□□□□ -0.41
CTNNA1-229ENST00000521683 KAT6BQ8WYB5 2073 aa12.47□□□□□ -0.41
CTNNA1-229ENST00000521683 YY1P25490 414 aa12.46□□□□□ -0.41
CTNNA1-229ENST00000521683 CDCA8Q53HL2 280 aa12.46□□□□□ -0.41
CTNNA1-229ENST00000521683 SLC27A3Q5K4L6 730 aa12.46□□□□□ -0.41
CTNNA1-229ENST00000521683 LTV1Q96GA3 475 aaPredicted RBP12.46□□□□□ -0.41
CTNNA1-229ENST00000521683 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 SHANK3Q9BYB0 1731 aa12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 FYB1O15117 783 aa12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 DDX54Q8TDD1 881 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 MEGF6O75095 1541 aa12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-229ENST00000521683 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
CTNNA1-229ENST00000521683 CGNL1Q0VF96 1302 aa12.44□□□□□ -0.42
CTNNA1-229ENST00000521683 LRRC4BQ9NT99 713 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms