RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 ZIC2O95409 532 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-209ENST00000521559 TIMP2P16035 220 aa6.96□□□□□ -1.3
VPS13B-209ENST00000521559 CCDC116Q8IYX3 515 aa6.96□□□□□ -1.3
VPS13B-209ENST00000521559 GJD4Q96KN9 370 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-209ENST00000521559 KCTD15Q96SI1 283 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-209ENST00000521559 PGPEP1Q9NXJ5 209 aa6.96□□□□□ -1.3
VPS13B-209ENST00000521559 NDUFB9Q9Y6M9 179 aa6.96□□□□□ -1.3
VPS13B-209ENST00000521559 POTECB2RU33 542 aa6.95□□□□□ -1.3
VPS13B-209ENST00000521559 UPP2O95045 317 aa6.95□□□□□ -1.3
VPS13B-209ENST00000521559 MCCD1P59942 119 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-209ENST00000521559 TRIM47Q96LD4 638 aa6.95□□□□□ -1.3
VPS13B-209ENST00000521559 KLF16Q9BXK1 252 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-209ENST00000521559 NR3C2P08235 984 aa6.94□□□□□ -1.3
VPS13B-209ENST00000521559 MRPL14Q6P1L8 145 aaKnown RBP6.94□□□□□ -1.3
VPS13B-209ENST00000521559 CCDC125Q86Z20 511 aa6.94□□□□□ -1.3
VPS13B-209ENST00000521559 MTMR14Q8NCE2 650 aa6.94□□□□□ -1.3
VPS13B-209ENST00000521559 ITPKCQ96DU7 683 aa6.93□□□□□ -1.3
VPS13B-209ENST00000521559 OCSTAMPQ9BR26 566 aa6.93□□□□□ -1.3
VPS13B-209ENST00000521559 SNRKQ9NRH2 765 aa6.93□□□□□ -1.3
VPS13B-209ENST00000521559 BMP1P13497 986 aa6.92□□□□□ -1.3
VPS13B-209ENST00000521559 NR1H3Q13133 447 aa6.92□□□□□ -1.3
VPS13B-209ENST00000521559 PPP1R26Q5T8A7 1209 aaPredicted RBP6.92□□□□□ -1.3
VPS13B-209ENST00000521559 TRIM46Q7Z4K8 759 aa6.92□□□□□ -1.3
VPS13B-209ENST00000521559 SEPT12Q8IYM1 358 aa6.92□□□□□ -1.3
VPS13B-209ENST00000521559 INTS6LQ5JSJ4 861 aaKnown RBP6.91□□□□□ -1.3
VPS13B-209ENST00000521559 TSEN34Q9BSV6 310 aaKnown RBP6.91□□□□□ -1.3
VPS13B-209ENST00000521559 ZFAND3Q9H8U3 227 aa6.91□□□□□ -1.3
VPS13B-209ENST00000521559 PCDHB9Q9Y5E1 797 aa6.91□□□□□ -1.3
VPS13B-209ENST00000521559 FBXO45P0C2W1 286 aa6.9□□□□□ -1.3
VPS13B-209ENST00000521559 RNF20Q5VTR2 975 aa6.9□□□□□ -1.3
VPS13B-209ENST00000521559 ZNF775Q96BV0 537 aaPredicted RBP6.9□□□□□ -1.3
VPS13B-209ENST00000521559 ZFP42Q96MM3 310 aa6.9□□□□□ -1.3
VPS13B-209ENST00000521559 BMP2P12643 396 aa6.89□□□□□ -1.31
VPS13B-209ENST00000521559 SNRPBP14678 240 aaKnown RBP6.89□□□□□ -1.31
VPS13B-209ENST00000521559 MEIOBQ8N635 442 aa6.89□□□□□ -1.31
VPS13B-209ENST00000521559 PURBQ96QR8 312 aaKnown RBP6.89□□□□□ -1.31
VPS13B-209ENST00000521559 ESPNB1AK53 854 aa6.88□□□□□ -1.31
VPS13B-209ENST00000521559 LINC00528Q8N1L1 170 aa6.88□□□□□ -1.31
VPS13B-209ENST00000521559 RAB15P59190 212 aa6.87□□□□□ -1.31
VPS13B-209ENST00000521559 TMEM132AQ24JP5 1023 aa6.87□□□□□ -1.31
VPS13B-209ENST00000521559 C6orf118Q5T5N4 469 aa6.87□□□□□ -1.31
VPS13B-209ENST00000521559 Q6ZVU0 165 aa6.87□□□□□ -1.31
VPS13B-209ENST00000521559 EIF4G2P78344 907 aaKnown RBP eCLIP6.86□□□□□ -1.31
VPS13B-209ENST00000521559 ERVH48-1M5A8F1 160 aa6.85□□□□□ -1.31
VPS13B-209ENST00000521559 FLIIQ13045 1269 aa6.85□□□□□ -1.31
VPS13B-209ENST00000521559 WASHC4Q2M389 1173 aa6.85□□□□□ -1.31
VPS13B-209ENST00000521559 WWC1Q8IX03 1113 aa6.85□□□□□ -1.31
VPS13B-209ENST00000521559 SLC16A10Q8TF71 515 aa6.85□□□□□ -1.31
VPS13B-209ENST00000521559 TBC1D2BQ9UPU7 963 aa6.85□□□□□ -1.31
VPS13B-209ENST00000521559 MAN1A2O60476 641 aa6.84□□□□□ -1.31
VPS13B-209ENST00000521559 GIGYF1O75420 1035 aaPredicted RBP6.84□□□□□ -1.31
VPS13B-209ENST00000521559 MCM6Q14566 821 aa6.84□□□□□ -1.31
VPS13B-209ENST00000521559 TREML4Q6UXN2 200 aa6.84□□□□□ -1.31
VPS13B-209ENST00000521559 NPAS3Q8IXF0 933 aa6.84□□□□□ -1.31
VPS13B-209ENST00000521559 ESF1Q9H501 851 aaKnown RBP6.84□□□□□ -1.31
VPS13B-209ENST00000521559 TERTO14746 1132 aaKnown RBP6.83□□□□□ -1.32
VPS13B-209ENST00000521559 WFS1O76024 890 aa6.83□□□□□ -1.32
VPS13B-209ENST00000521559 CBLBQ13191 982 aa6.83□□□□□ -1.32
VPS13B-209ENST00000521559 ZNF784Q8NCA9 323 aaPredicted RBP6.83□□□□□ -1.32
VPS13B-209ENST00000521559 TMPRSS4Q9NRS4 437 aa6.83□□□□□ -1.32
VPS13B-209ENST00000521559 NXF1Q9UBU9 619 aaKnown RBP6.83□□□□□ -1.32
VPS13B-209ENST00000521559 SPINT1O43278 529 aa6.82□□□□□ -1.32
VPS13B-209ENST00000521559 RAD21O60216 631 aa6.82□□□□□ -1.32
VPS13B-209ENST00000521559 GPR37L1O60883 481 aa6.82□□□□□ -1.32
VPS13B-209ENST00000521559 ADH1AP07327 375 aa6.82□□□□□ -1.32
VPS13B-209ENST00000521559 GDPD2Q9HCC8 539 aa6.82□□□□□ -1.32
VPS13B-209ENST00000521559 SOS2Q07890 1332 aaPredicted RBP6.81□□□□□ -1.32
VPS13B-209ENST00000521559 TTLL8A6PVC2 850 aa6.81□□□□□ -1.32
VPS13B-209ENST00000521559 SOX11P35716 441 aa6.81□□□□□ -1.32
VPS13B-209ENST00000521559 ABL2P42684 1182 aa6.81□□□□□ -1.32
VPS13B-209ENST00000521559 CEP126Q9P2H0 1117 aa6.81□□□□□ -1.32
VPS13B-209ENST00000521559 LILRA1O75019 489 aa6.8□□□□□ -1.32
VPS13B-209ENST00000521559 RELBQ01201 579 aa6.8□□□□□ -1.32
VPS13B-209ENST00000521559 IRF5Q13568 498 aa6.8□□□□□ -1.32
VPS13B-209ENST00000521559 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.8□□□□□ -1.32
VPS13B-209ENST00000521559 CC2D2BQ6DHV5 1058 aa6.8□□□□□ -1.32
VPS13B-209ENST00000521559 CYLDQ9NQC7 956 aa6.8□□□□□ -1.32
VPS13B-209ENST00000521559 ADD1P35611 737 aaKnown RBP6.79□□□□□ -1.32
VPS13B-209ENST00000521559 PTGIRP43119 386 aa6.79□□□□□ -1.32
VPS13B-209ENST00000521559 NFX1Q12986 1120 aaKnown RBP6.79□□□□□ -1.32
VPS13B-209ENST00000521559 SLFNL1Q499Z3 407 aa6.79□□□□□ -1.32
VPS13B-209ENST00000521559 AGBL1Q96MI9 1066 aa6.79□□□□□ -1.32
VPS13B-209ENST00000521559 PCDHB11Q9Y5F2 797 aa6.79□□□□□ -1.32
VPS13B-209ENST00000521559 ATP5J2-PTCD1G3V325 749 aa6.78□□□□□ -1.32
VPS13B-209ENST00000521559 ERVK-9P63128 1117 aa6.78□□□□□ -1.32
VPS13B-209ENST00000521559 VAC14Q08AM6 782 aa6.78□□□□□ -1.32
VPS13B-209ENST00000521559 SEMA3FQ13275 785 aa6.78□□□□□ -1.32
VPS13B-209ENST00000521559 POLMQ9NP87 494 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-209ENST00000521559 MYCP01106 439 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-209ENST00000521559 UBTFP17480 764 aaKnown RBP6.77□□□□□ -1.33
VPS13B-209ENST00000521559 CYP2U1Q7Z449 544 aa6.77□□□□□ -1.33
VPS13B-209ENST00000521559 IRF7Q92985 503 aa6.77□□□□□ -1.33
VPS13B-209ENST00000521559 SIRT1Q96EB6 747 aa6.77□□□□□ -1.33
VPS13B-209ENST00000521559 ZNF395Q9H8N7 513 aaPredicted RBP6.77□□□□□ -1.33
VPS13B-209ENST00000521559 COG6Q9Y2V7 657 aa6.77□□□□□ -1.33
VPS13B-209ENST00000521559 SOBPA7XYQ1 873 aa6.76□□□□□ -1.33
VPS13B-209ENST00000521559 RNF135Q8IUD6 432 aa6.76□□□□□ -1.33
VPS13B-209ENST00000521559 INSM2Q96T92 566 aaPredicted RBP6.76□□□□□ -1.33
VPS13B-209ENST00000521559 DNMT3LQ9UJW3 386 aa6.76□□□□□ -1.33
VPS13B-209ENST00000521559 FIGNL2A6NMB9 653 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms