RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	ZNF316	A6NFI3	1004 aa	Predicted RBP	7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	TBC1D12	O60347	775 aa		7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	SLC34A2	O95436	690 aa		7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	SCUBE2	Q9NQ36	999 aa		7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	AFF2	P51816	1311 aa		7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	XRN1	Q8IZH2	1706 aa	Known RBP	7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	MST1R	Q04912	1400 aa		7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	PRAG1	Q86YV5	1406 aa		7.69	□□□□□ -1.18
CDH17-205	ENST00000521491	NHSL1	Q5SYE7	1610 aa		7.68	□□□□□ -1.18
CDH17-205	ENST00000521491	NBPF8	Q3BBV2	869 aa		7.68	□□□□□ -1.18
CDH17-205	ENST00000521491	PTCD2	Q8WV60	388 aa	Known RBP	7.68	□□□□□ -1.18
CDH17-205	ENST00000521491	MET	P08581	1390 aa		7.68	□□□□□ -1.18
CDH17-205	ENST00000521491	RALGAPB	Q86X10	1494 aa		7.68	□□□□□ -1.18
CDH17-205	ENST00000521491	LAMC1	P11047	1609 aa		7.67	□□□□□ -1.18
CDH17-205	ENST00000521491	POTEJ	P0CG39	1038 aa		7.67	□□□□□ -1.18
CDH17-205	ENST00000521491	RGS12	O14924	1447 aa		7.67	□□□□□ -1.18
CDH17-205	ENST00000521491	CDK12	Q9NYV4	1490 aa	Predicted RBP	7.67	□□□□□ -1.18
CDH17-205	ENST00000521491	NRXN1	Q9ULB1	1477 aa		7.67	□□□□□ -1.18
CDH17-205	ENST00000521491	SETBP1	Q9Y6X0	1596 aa		7.67	□□□□□ -1.18
CDH17-205	ENST00000521491	POTEB2	H3BUK9	544 aa		7.66	□□□□□ -1.18
CDH17-205	ENST00000521491	MLLT3	P42568	568 aa	Predicted RBP	7.66	□□□□□ -1.18
CDH17-205	ENST00000521491	C8orf37	Q96NL8	207 aa		7.66	□□□□□ -1.18
CDH17-205	ENST00000521491	QTRT2	Q9H974	415 aa	Known RBP	7.66	□□□□□ -1.18
CDH17-205	ENST00000521491	DCC	P43146	1447 aa		7.66	□□□□□ -1.18
CDH17-205	ENST00000521491	NALCN	Q8IZF0	1738 aa		7.66	□□□□□ -1.18
CDH17-205	ENST00000521491	PIK3C2G	O75747	1445 aa		7.65	□□□□□ -1.18
CDH17-205	ENST00000521491	ADAMTS2	O95450	1211 aa		7.65	□□□□□ -1.18
CDH17-205	ENST00000521491	PNPLA6	Q8IY17	1366 aa		7.65	□□□□□ -1.18
CDH17-205	ENST00000521491	ADGRF5	Q8IZF2	1346 aa		7.65	□□□□□ -1.18
CDH17-205	ENST00000521491	LRRC59	Q96AG4	307 aa	Known RBP	7.65	□□□□□ -1.18
CDH17-205	ENST00000521491	ADGRL3	Q9HAR2	1447 aa		7.64	□□□□□ -1.19
CDH17-205	ENST00000521491	RPGRIP1L	Q68CZ1	1315 aa		7.64	□□□□□ -1.19
CDH17-205	ENST00000521491	EVI5	O60447	810 aa		7.64	□□□□□ -1.19
CDH17-205	ENST00000521491	RBM6	P78332	1123 aa	Known RBP	7.64	□□□□□ -1.19
CDH17-205	ENST00000521491	SLAIN1	Q8ND83	568 aa		7.64	□□□□□ -1.19
CDH17-205	ENST00000521491	ARHGEF28	Q8N1W1	1705 aa	Known RBP	7.64	□□□□□ -1.19
CDH17-205	ENST00000521491	ROCK2	O75116	1388 aa	Known RBP	7.63	□□□□□ -1.19
CDH17-205	ENST00000521491	PTGER2	P43116	358 aa		7.63	□□□□□ -1.19
CDH17-205	ENST00000521491	DOK7	Q18PE1	504 aa		7.63	□□□□□ -1.19
CDH17-205	ENST00000521491	NGLY1	Q96IV0	654 aa		7.63	□□□□□ -1.19
CDH17-205	ENST00000521491	ORAI2	Q96SN7	254 aa		7.63	□□□□□ -1.19
CDH17-205	ENST00000521491	C1orf167	Q5SNV9	1468 aa		7.62	□□□□□ -1.19
CDH17-205	ENST00000521491	NBPF1	Q3BBV0	1214 aa		7.62	□□□□□ -1.19
CDH17-205	ENST00000521491	QRICH2	Q9H0J4	1663 aa		7.62	□□□□□ -1.19
CDH17-205	ENST00000521491	ADGRB1	O14514	1584 aa		7.62	□□□□□ -1.19
CDH17-205	ENST00000521491	ROBO2	Q9HCK4	1378 aa		7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	SOS2	Q07890	1332 aa	Predicted RBP	7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	GRXCR2	A6NFK2	248 aa		7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	RIMBP2	O15034	1052 aa		7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	ZC3H15	Q8WU90	426 aa	Known RBP	7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	USP21	Q9UK80	565 aa		7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	PCDHGA4	Q9Y5G9	962 aa		7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	KNDC1	Q76NI1	1749 aa		7.61	□□□□□ -1.19
CDH17-205	ENST00000521491	GPRASP1	Q5JY77	1395 aa		7.6	□□□□□ -1.19
CDH17-205	ENST00000521491	USP47	Q96K76	1375 aa		7.6	□□□□□ -1.19
CDH17-205	ENST00000521491	CFAP70	Q5T0N1	1121 aa		7.6	□□□□□ -1.19
CDH17-205	ENST00000521491	RBM26	Q5T8P6	1007 aa	Known RBP	7.6	□□□□□ -1.19
CDH17-205	ENST00000521491	GPIHBP1	Q8IV16	184 aa		7.6	□□□□□ -1.19
CDH17-205	ENST00000521491	STAC3	Q96MF2	364 aa		7.6	□□□□□ -1.19
CDH17-205	ENST00000521491	CARD11	Q9BXL7	1154 aa		7.6	□□□□□ -1.19
CDH17-205	ENST00000521491	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.6	□□□□□ -1.19
CDH17-205	ENST00000521491	HSPA5	P11021	654 aa	Known RBP	7.59	□□□□□ -1.19
CDH17-205	ENST00000521491	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.59	□□□□□ -1.19
CDH17-205	ENST00000521491	ZSWIM6	Q9HCJ5	1215 aa		7.59	□□□□□ -1.19
CDH17-205	ENST00000521491	ATAD2	Q6PL18	1390 aa		7.59	□□□□□ -1.2
CDH17-205	ENST00000521491	XPC	Q01831	940 aa	Predicted RBP	7.58	□□□□□ -1.2
CDH17-205	ENST00000521491	DDX12P	Q92771	950 aa		7.58	□□□□□ -1.2
CDH17-205	ENST00000521491	TRPC5	Q9UL62	973 aa	Predicted RBP	7.58	□□□□□ -1.2
CDH17-205	ENST00000521491	COL22A1	Q8NFW1	1626 aa	Predicted RBP	7.58	□□□□□ -1.2
CDH17-205	ENST00000521491	ATRN	O75882	1429 aa		7.58	□□□□□ -1.2
CDH17-205	ENST00000521491	PTCH1	Q13635	1447 aa		7.58	□□□□□ -1.2
CDH17-205	ENST00000521491	SNPH	O15079	494 aa		7.57	□□□□□ -1.2
CDH17-205	ENST00000521491	HOXB3	P14651	431 aa	Predicted RBP	7.57	□□□□□ -1.2
CDH17-205	ENST00000521491	EIF4G2	P78344	907 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
CDH17-205	ENST00000521491	ESCO1	Q5FWF5	840 aa		7.57	□□□□□ -1.2
CDH17-205	ENST00000521491	TMEM132E	Q6IEE7	984 aa		7.57	□□□□□ -1.2
CDH17-205	ENST00000521491	C14orf93	Q9H972	538 aa	Known RBP	7.57	□□□□□ -1.2
CDH17-205	ENST00000521491	BCL9L	Q86UU0	1499 aa		7.56	□□□□□ -1.2
CDH17-205	ENST00000521491	YTHDC2	Q9H6S0	1430 aa	Known RBP	7.56	□□□□□ -1.2
CDH17-205	ENST00000521491	NUTM2F	A1L443	756 aa		7.56	□□□□□ -1.2
CDH17-205	ENST00000521491	FOXO3	O43524	673 aa		7.56	□□□□□ -1.2
CDH17-205	ENST00000521491	OSBP	P22059	807 aa		7.56	□□□□□ -1.2
CDH17-205	ENST00000521491	ZNF710	Q8N1W2	664 aa		7.56	□□□□□ -1.2
CDH17-205	ENST00000521491	EIF3A	Q14152	1382 aa	Known RBP	7.56	□□□□□ -1.2
CDH17-205	ENST00000521491	PXDN	Q92626	1479 aa		7.55	□□□□□ -1.2
CDH17-205	ENST00000521491	MARF1	Q9Y4F3	1742 aa	Known RBP	7.55	□□□□□ -1.2
CDH17-205	ENST00000521491	ZMYND10	O75800	440 aa		7.55	□□□□□ -1.2
CDH17-205	ENST00000521491	PHF14	O94880	888 aa		7.55	□□□□□ -1.2
CDH17-205	ENST00000521491	WAPL	Q7Z5K2	1190 aa		7.55	□□□□□ -1.2
CDH17-205	ENST00000521491	EPAS1	Q99814	870 aa		7.55	□□□□□ -1.2
CDH17-205	ENST00000521491	MYOM1	P52179	1685 aa		7.54	□□□□□ -1.2
CDH17-205	ENST00000521491	DLC1	Q96QB1	1528 aa		7.54	□□□□□ -1.2
CDH17-205	ENST00000521491	ST20-MTHFS	A0A0A6YYL1	179 aa		7.54	□□□□□ -1.2
CDH17-205	ENST00000521491	GJD4	Q96KN9	370 aa	Predicted RBP	7.54	□□□□□ -1.2
CDH17-205	ENST00000521491	STK26	Q9P289	416 aa		7.54	□□□□□ -1.2
CDH17-205	ENST00000521491	TRAK1	Q9UPV9	953 aa		7.54	□□□□□ -1.2
CDH17-205	ENST00000521491	CDC42BPG	Q6DT37	1551 aa		7.54	□□□□□ -1.2
CDH17-205	ENST00000521491	NPHP3	Q7Z494	1330 aa		7.53	□□□□□ -1.2
CDH17-205	ENST00000521491	ARSI	Q5FYB1	569 aa		7.53	□□□□□ -1.2

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