RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 RIMS1Q86UR5 1692 aaKnown RBP7.23□□□□□ -1.25
VPS13B-208ENST00000521037 H3BM21 787 aa7.23□□□□□ -1.25
VPS13B-208ENST00000521037 KDM2AQ9Y2K7 1162 aa7.23□□□□□ -1.25
VPS13B-208ENST00000521037 CAPN5O15484 640 aaPredicted RBP7.22□□□□□ -1.25
VPS13B-208ENST00000521037 SLC16A10Q8TF71 515 aa7.22□□□□□ -1.25
VPS13B-208ENST00000521037 ERBB4Q15303 1308 aa7.22□□□□□ -1.25
VPS13B-208ENST00000521037 YEATS2Q9ULM3 1422 aa7.21□□□□□ -1.25
VPS13B-208ENST00000521037 RAPGEF3O95398 923 aa7.21□□□□□ -1.26
VPS13B-208ENST00000521037 MPNDQ8N594 471 aa7.21□□□□□ -1.26
VPS13B-208ENST00000521037 EHBP1Q8NDI1 1231 aa7.21□□□□□ -1.26
VPS13B-208ENST00000521037 CCDC102AQ96A19 550 aa7.21□□□□□ -1.26
VPS13B-208ENST00000521037 GPCPD1Q9NPB8 672 aa7.21□□□□□ -1.26
VPS13B-208ENST00000521037 EVA1BQ9NVM1 165 aa7.21□□□□□ -1.26
VPS13B-208ENST00000521037 IQSEC2Q5JU85 1478 aa7.2□□□□□ -1.26
VPS13B-208ENST00000521037 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
VPS13B-208ENST00000521037 KRTAP4-6Q9BYQ5 205 aa7.2□□□□□ -1.26
VPS13B-208ENST00000521037 TTBK1Q5TCY1 1321 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-208ENST00000521037 MED1Q15648 1581 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-208ENST00000521037 CLCN1P35523 988 aa7.19□□□□□ -1.26
VPS13B-208ENST00000521037 ZSCAN1Q8NBB4 408 aa7.19□□□□□ -1.26
VPS13B-208ENST00000521037 IRF7Q92985 503 aa7.19□□□□□ -1.26
VPS13B-208ENST00000521037 ZFP42Q96MM3 310 aa7.19□□□□□ -1.26
VPS13B-208ENST00000521037 KLF16Q9BXK1 252 aaPredicted RBP7.19□□□□□ -1.26
VPS13B-208ENST00000521037 TTC37Q6PGP7 1564 aa7.18□□□□□ -1.26
VPS13B-208ENST00000521037 CCNYL3P0C7X3 344 aa7.18□□□□□ -1.26
VPS13B-208ENST00000521037 FDX1P10109 184 aa7.18□□□□□ -1.26
VPS13B-208ENST00000521037 VEGFBP49765 207 aa7.18□□□□□ -1.26
VPS13B-208ENST00000521037 WASF2Q9Y6W5 498 aa7.18□□□□□ -1.26
VPS13B-208ENST00000521037 PTPRTO14522 1441 aa7.18□□□□□ -1.26
VPS13B-208ENST00000521037 CARMIL2Q6F5E8 1435 aa7.18□□□□□ -1.26
VPS13B-208ENST00000521037 ARHGEF40Q8TER5 1519 aa7.17□□□□□ -1.26
VPS13B-208ENST00000521037 UGGT2Q9NYU1 1516 aa7.17□□□□□ -1.26
VPS13B-208ENST00000521037 ABCA8O94911 1581 aa7.17□□□□□ -1.26
VPS13B-208ENST00000521037 PTPRNQ16849 979 aa7.17□□□□□ -1.26
VPS13B-208ENST00000521037 BAP1Q92560 729 aa7.17□□□□□ -1.26
VPS13B-208ENST00000521037 UNC93B1Q9H1C4 597 aa7.17□□□□□ -1.26
VPS13B-208ENST00000521037 IQGAP2Q13576 1575 aa7.16□□□□□ -1.26
VPS13B-208ENST00000521037 MS4A1P11836 297 aa7.16□□□□□ -1.26
VPS13B-208ENST00000521037 KCNH2Q12809 1159 aa7.16□□□□□ -1.26
VPS13B-208ENST00000521037 NUTM1Q86Y26 1132 aa7.16□□□□□ -1.26
VPS13B-208ENST00000521037 SPIRE2Q8WWL2 714 aa7.16□□□□□ -1.26
VPS13B-208ENST00000521037 FAM181BA6NEQ2 426 aa7.15□□□□□ -1.26
VPS13B-208ENST00000521037 VSIG8P0DPA2 414 aa7.15□□□□□ -1.26
VPS13B-208ENST00000521037 DESI1Q6ICB0 168 aa7.15□□□□□ -1.26
VPS13B-208ENST00000521037 TLL2Q9Y6L7 1015 aa7.15□□□□□ -1.26
VPS13B-208ENST00000521037 KIAA0556O60303 1618 aa7.15□□□□□ -1.27
VPS13B-208ENST00000521037 ABCA9Q8IUA7 1624 aa7.15□□□□□ -1.27
VPS13B-208ENST00000521037 C6orf229H3BNL8 230 aa7.14□□□□□ -1.27
VPS13B-208ENST00000521037 TIMP2P16035 220 aa7.14□□□□□ -1.27
VPS13B-208ENST00000521037 NDUFV2P19404 249 aa7.14□□□□□ -1.27
VPS13B-208ENST00000521037 VARSP26640 1264 aaKnown RBP7.14□□□□□ -1.27
VPS13B-208ENST00000521037 PHLDB1Q86UU1 1377 aa7.14□□□□□ -1.27
VPS13B-208ENST00000521037 ZNF511Q8NB15 262 aa7.14□□□□□ -1.27
VPS13B-208ENST00000521037 ARHGEF12Q9NZN5 1544 aa7.14□□□□□ -1.27
VPS13B-208ENST00000521037 RGS17Q9UGC6 210 aaPredicted RBP7.14□□□□□ -1.27
VPS13B-208ENST00000521037 ALKQ9UM73 1620 aa7.14□□□□□ -1.27
VPS13B-208ENST00000521037 PREX1Q8TCU6 1659 aa7.13□□□□□ -1.27
VPS13B-208ENST00000521037 NEO1Q92859 1461 aa7.13□□□□□ -1.27
VPS13B-208ENST00000521037 MOXD2PA6NHM9 499 aa7.13□□□□□ -1.27
VPS13B-208ENST00000521037 SSTR3P32745 418 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-208ENST00000521037 LINC01559Q495D7 138 aa7.13□□□□□ -1.27
VPS13B-208ENST00000521037 MRPL14Q6P1L8 145 aaKnown RBP7.13□□□□□ -1.27
VPS13B-208ENST00000521037 RICTORQ6R327 1708 aa7.13□□□□□ -1.27
VPS13B-208ENST00000521037 FHOD3Q2V2M9 1422 aa7.12□□□□□ -1.27
VPS13B-208ENST00000521037 NNTQ13423 1086 aa7.12□□□□□ -1.27
VPS13B-208ENST00000521037 PRR7Q8TB68 274 aa7.12□□□□□ -1.27
VPS13B-208ENST00000521037 CDK15Q96Q40 435 aa7.12□□□□□ -1.27
VPS13B-208ENST00000521037 ZMYM4Q5VZL5 1548 aa7.11□□□□□ -1.27
VPS13B-208ENST00000521037 CARMIL1Q5VZK9 1371 aa7.11□□□□□ -1.27
VPS13B-208ENST00000521037 PLEKHG3A1L390 1219 aa7.11□□□□□ -1.27
VPS13B-208ENST00000521037 CEBPAP49715 358 aaPredicted RBP7.11□□□□□ -1.27
VPS13B-208ENST00000521037 GSK3AP49840 483 aa7.11□□□□□ -1.27
VPS13B-208ENST00000521037 ATP10BO94823 1461 aa7.11□□□□□ -1.27
VPS13B-208ENST00000521037 SOBPA7XYQ1 873 aa7.1□□□□□ -1.27
VPS13B-208ENST00000521037 HSPA1LP34931 641 aa7.1□□□□□ -1.27
VPS13B-208ENST00000521037 LYPD8Q6UX82 237 aa7.1□□□□□ -1.27
VPS13B-208ENST00000521037 NCOA1Q15788 1441 aa7.1□□□□□ -1.27
VPS13B-208ENST00000521037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.09□□□□□ -1.27
VPS13B-208ENST00000521037 PURBQ96QR8 312 aaKnown RBP7.09□□□□□ -1.27
VPS13B-208ENST00000521037 ARID4BQ4LE39 1312 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-208ENST00000521037 SPDYE5A6NIY4 337 aa7.08□□□□□ -1.28
VPS13B-208ENST00000521037 ADH1CP00326 375 aa7.08□□□□□ -1.28
VPS13B-208ENST00000521037 GJA5P36382 358 aa7.08□□□□□ -1.28
VPS13B-208ENST00000521037 GRM5P41594 1212 aa7.08□□□□□ -1.28
VPS13B-208ENST00000521037 WDR4P57081 412 aaKnown RBP7.08□□□□□ -1.28
VPS13B-208ENST00000521037 MTMR2Q13614 643 aa7.08□□□□□ -1.28
VPS13B-208ENST00000521037 FER1L4A9Z1Z3 1794 aa7.08□□□□□ -1.28
VPS13B-208ENST00000521037 ZNF335Q9H4Z2 1342 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-208ENST00000521037 F12P00748 615 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-208ENST00000521037 NR3C2P08235 984 aa7.07□□□□□ -1.28
VPS13B-208ENST00000521037 C4orf48Q5BLP8 95 aa7.07□□□□□ -1.28
VPS13B-208ENST00000521037 FOXJ1Q92949 421 aa7.07□□□□□ -1.28
VPS13B-208ENST00000521037 SCARF1Q14162 830 aa7.06□□□□□ -1.28
VPS13B-208ENST00000521037 AMHR2Q16671 573 aa7.06□□□□□ -1.28
VPS13B-208ENST00000521037 ZFAND3Q9H8U3 227 aa7.06□□□□□ -1.28
VPS13B-208ENST00000521037 PCDHB15Q9Y5E8 787 aa7.06□□□□□ -1.28
VPS13B-208ENST00000521037 KIF27Q86VH2 1401 aa7.06□□□□□ -1.28
VPS13B-208ENST00000521037 FANCAO15360 1455 aa7.05□□□□□ -1.28
VPS13B-208ENST00000521037 CFAP99D6REC4 459 aa7.05□□□□□ -1.28
VPS13B-208ENST00000521037 UBAP1LF5GYI3 381 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms